Factsheet for HORVU2Hr1G084630.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G084620.1	Barley	cytosol, mitochondrion, plastid	24.85	56.0
Zm00001d051485_P001	Maize	plastid	36.09	33.33
AGP50763	Barley	cytosol	57.4	20.25
HORVU7Hr1G091620.1	Barley	cytosol	57.4	20.08
HORVU0Hr1G029790.1	Barley	cytosol	57.4	20.08
HORVU6Hr1G049260.1	Barley	cytosol	57.4	20.08
HORVU0Hr1G031270.1	Barley	cytosol	57.4	20.08
HORVU5Hr1G064700.7	Barley	cytosol	57.4	20.08
HORVU6Hr1G047870.6	Barley	cytosol	55.62	19.46
ATMG00280.1	Thale cress	mitochondrion	10.65	16.36
Os01t0899425-00	Rice	cytosol	9.47	15.09
HORVU0Hr1G036870.1	Barley	cytosol, mitochondrion	6.51	14.86
HORVU0Hr1G033030.1	Barley	cytosol	7.1	13.79
HORVU3Hr1G048820.1	Barley	cytosol	7.1	13.48
HORVU0Hr1G024560.2	Barley	plastid	11.24	13.19
HORVU0Hr1G034320.1	Barley	cytosol	4.73	8.89
Solyc12g062420.1.1	Tomato	cytosol	5.92	8.77
HORVU7Hr1G065780.1	Barley	cytosol	2.96	6.41
HORVU0Hr1G027620.1	Barley	cytosol	6.51	5.67
HORVU0Hr1G026090.1	Barley	cytosol	2.96	4.81
Solyc02g077860.1.1	Tomato	cytosol, extracellular	1.78	2.33
HORVU3Hr1G055820.2	Barley	cytosol, plastid	0.0	0.0
EES00795	Sorghum	cytosol	0.0	0.0
HORVU0Hr1G030760.1	Barley	cytosol, mitochondrion	0.0	0.0

Protein Annotations

KEGG:00630+4.1.1.39	KEGG:00710+4.1.1.39	Gene3D:3.20.20.110	Gene3D:3.30.70.150	MapMan:35.1	GO:GO:0000287
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0015977
GO:GO:0016984	EnsemblPlantsGene:HORVU2Hr1G084630	EnsemblPlants:HORVU2Hr1G084630.3	InterPro:IPR036376	InterPro:IPR036422	PFAM:PF00016
PFAM:PF02788	PANTHER:PTHR42704	PANTHER:PTHR42704:SF2	InterPro:RuBisCO_lsu_C	InterPro:RuBisCO_lsu_C_sf	InterPro:RuBisCO_lsu_N_sf
InterPro:RuBisCO_lsu_fd_N	SUPFAM:SSF51649	SUPFAM:SSF54966	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr2H:+:612149572..612150079

Molecular Weight (calculated)

14511.5 Da

IEP (calculated)

10.711

GRAVY (calculated)

-0.417

Length

169 amino acids

Sequence
(BLAST)

001: MFTSIVGNVF GFKALRALRL EDLRIPPTYS KTFQGPPHGI QVERDKLNKY GRPLLGCTIK PKLGLSAKNY GRACYECRRG GLDFTKXXXX XXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXX AGEPRDPSPM VPVPEAGSPR AAPSSRSPAR AAAGAPPLTG RRPDAGDLH

Best Arabidopsis Sequence Match ( ATCG00490.1 )
(BLAST)

001: MSPQTETKAS VGFKAGVKEY KLTYYTPEYE TKDTDILAAF RVTPQPGVPP EEAGAAVAAE SSTGTWTTVW TDGLTSLDRY KGRCYHIEPV PGEETQFIAY
101: VAYPLDLFEE GSVTNMFTSI VGNVFGFKAL AALRLEDLRI PPAYTKTFQG PPHGIQVERD KLNKYGRPLL GCTIKPKLGL SAKNYGRAVY ECLRGGLDFT
201: KDDENVNSQP FMRWRDRFLF CAEAIYKSQA ETGEIKGHYL NATAGTCEEM IKRAVFAREL GVPIVMHDYL TGGFTANTSL SHYCRDNGLL LHIHRAMHAV
301: IDRQKNHGMH FRVLAKALRL SGGDHIHAGT VVGKLEGDRE STLGFVDLLR DDYVEKDRSR GIFFTQDWVS LPGVLPVASG GIHVWHMPAL TEIFGDDSVL
401: QFGGGTLGHP WGNAPGAVAN RVALEACVQA RNEGRDLAVE GNEIIREACK WSPELAAACE VWKEITFNFP TIDKLDGQE

Arabidopsis Description

RBCLRibulose bisphosphate carboxylase large chain [Source:UniProtKB/Swiss-Prot;Acc:O03042]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.