Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G07732.1 | Thale cress | mitochondrion | 80.19 | 73.28 |
| Solyc12g062420.1.1 | Tomato | cytosol | 43.4 | 40.35 |
| EES00795 | Sorghum | cytosol | 50.94 | 37.76 |
| Solyc02g077860.1.1 | Tomato | cytosol, extracellular | 30.19 | 24.81 |
| Os01t0791033-00 | Rice | cytosol | 50.94 | 20.07 |
| CAA34004 | Rice | cytosol, extracellular, plastid | 77.36 | 17.19 |
| Os12t0207600-00 | Rice | plastid | 77.36 | 17.19 |
| Os10t0356000-00 | Rice | plastid | 76.42 | 16.98 |
| HORVU2Hr1G084630.3 | Barley | mitochondrion | 15.09 | 9.47 |
| Zm00001d051485_P001 | Maize | plastid | 1.89 | 1.09 |
| Os05t0427800-00 | Rice | cytosol, mitochondrion, plastid | 0.0 | 0.0 |
Protein Annotations
| KEGG:00630+4.1.1.39 | KEGG:00710+4.1.1.39 | Gene3D:3.20.20.110 | MapMan:35.1 | UniProt:A0A0P0VBL9 | ProteinID:BAS75735.1 |
| GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009522 | GO:GO:0009536 | GO:GO:0009579 |
| GO:GO:0009853 | GO:GO:0009987 | GO:GO:0015977 | GO:GO:0015979 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016491 | GO:GO:0016829 | GO:GO:0016984 | GO:GO:0019253 | GO:GO:0046872 | GO:GO:0055114 |
| InterPro:IPR036376 | InterPro:IPR036408 | EnsemblPlantsGene:Os01g0899425 | EnsemblPlants:Os01t0899425-00 | PFAM:PF00016 | ScanProsite:PS00157 |
| ScanProsite:PS00419 | InterPro:PSI_PsaA/B_CS | InterPro:PSI_PsaA/B_sf | PANTHER:PTHR42704 | PANTHER:PTHR42704:SF2 | InterPro:RuBisCO_lsu_C |
| InterPro:RuBisCO_lsu_C_sf | InterPro:RuBisCo_large_chain_AS | SUPFAM:SSF51649 | SUPFAM:SSF81558 | UniParc:UPI0003938AC6 | : |
Description
Similar to ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit. (Os01t0899425-00)
Coordinates
chr1:+:39121870..39122187
Molecular Weight (calculated)
11793.9 Da
IEP (calculated)
5.136
GRAVY (calculated)
-0.328
Length
106 amino acids
Sequence
(BLAST)
(BLAST)
001: CDGPGRGGTC DISAWRACYE CLRGGLDFTK DDENVNSQPF MRWRDRFVFC AEAIYKAQAE TGEIKGHYLN ATAGTCEEMI KRAVFARELG VPIVMHDYLT
101: GGFTAN
101: GGFTAN
001: MNNAAKRADC WFGAKNYGRA VYECLRGGLY FTKDDENVNS QPFMRWRDRF LFCAEAVYKA QAETGGIKGH YLNATPGTCE EMIKRAVFAR ELGVPIVMHD
101: YLTGGFTANT SLAHSR
101: YLTGGFTANT SLAHSR
Arabidopsis Description
Ribulose bisphosphate carboxylase large chain, catalytic domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4INE2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.