Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| ATMG00280.1 | Thale cress | mitochondrion | 87.93 | 92.73 |
| Os01t0899425-00 | Rice | cytosol | 73.28 | 80.19 |
| ATCG00490.1 | Thale cress | cytosol | 68.97 | 16.7 |
| Zm00001d051485_P001 | Maize | plastid | 1.72 | 1.09 |
Protein Annotations
| KEGG:00630+4.1.1.39 | KEGG:00710+4.1.1.39 | Gene3D:3.20.20.110 | MapMan:35.1 | EntrezGene:3768663 | ProteinID:AEC06111.1 |
| ArrayExpress:AT2G07732 | EnsemblPlantsGene:AT2G07732 | RefSeq:AT2G07732 | TAIR:AT2G07732 | RefSeq:AT2G07732-TAIR-G | EnsemblPlants:AT2G07732.1 |
| TAIR:AT2G07732.1 | UniProt:F4INE2 | GO:GO:0000287 | GO:GO:0000312 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0009536 |
| GO:GO:0009570 | InterPro:IPR036376 | RefSeq:NP_001154505.1 | PFAM:PF00016 | PO:PO:0000293 | PANTHER:PTHR42704 |
| PANTHER:PTHR42704:SF2 | InterPro:RuBisCO_lsu_C | InterPro:RuBisCO_lsu_C_sf | SUPFAM:SSF51649 | UniParc:UPI0001A7B36D | : |
Description
Ribulose bisphosphate carboxylase large chain, catalytic domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4INE2]
Coordinates
chr2:-:3468160..3468899
Molecular Weight (calculated)
13067.5 Da
IEP (calculated)
8.621
GRAVY (calculated)
-0.391
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNAAKRADC WFGAKNYGRA VYECLRGGLY FTKDDENVNS QPFMRWRDRF LFCAEAVYKA QAETGGIKGH YLNATPGTCE EMIKRAVFAR ELGVPIVMHD
101: YLTGGFTANT SLAHSR
101: YLTGGFTANT SLAHSR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.