Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G055820.2 | Barley | cytosol, plastid | 31.25 | 62.5 |
| OQU80110 | Sorghum | extracellular, vacuole | 27.08 | 44.32 |
| HORVU6Hr1G047870.6 | Barley | cytosol | 65.97 | 19.67 |
| AGP50763 | Barley | cytosol | 65.28 | 19.62 |
| HORVU6Hr1G049260.1 | Barley | cytosol | 65.28 | 19.46 |
| HORVU5Hr1G064700.7 | Barley | cytosol | 65.28 | 19.46 |
| HORVU7Hr1G091620.1 | Barley | cytosol | 65.28 | 19.46 |
| HORVU0Hr1G031270.1 | Barley | cytosol | 65.28 | 19.46 |
| HORVU0Hr1G029790.1 | Barley | cytosol | 65.28 | 19.46 |
| VIT_12s0055g00520.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 3.47 | 13.51 |
| HORVU2Hr1G084630.3 | Barley | mitochondrion | 13.19 | 11.24 |
| HORVU7Hr1G065780.1 | Barley | cytosol | 4.86 | 8.97 |
| HORVU0Hr1G026090.1 | Barley | cytosol | 5.56 | 7.69 |
| HORVU3Hr1G048820.1 | Barley | cytosol | 4.17 | 6.74 |
| HORVU0Hr1G034320.1 | Barley | cytosol | 4.17 | 6.67 |
| HORVU0Hr1G036870.1 | Barley | cytosol, mitochondrion | 2.78 | 5.41 |
| CDY10606 | Canola | cytosol | 2.08 | 4.69 |
| HORVU0Hr1G027620.1 | Barley | cytosol | 6.25 | 4.64 |
| HORVU0Hr1G033030.1 | Barley | cytosol | 2.08 | 3.45 |
| HORVU2Hr1G084620.1 | Barley | cytosol, mitochondrion, plastid | 0.0 | 0.0 |
| HORVU0Hr1G030760.1 | Barley | cytosol, mitochondrion | 0.0 | 0.0 |
Protein Annotations
| KEGG:00630+4.1.1.39 | KEGG:00710+4.1.1.39 | Gene3D:3.20.20.110 | MapMan:35.1 | UniProt:A0A287E8P9 | GO:GO:0000287 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0015977 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016984 | EnsemblPlantsGene:HORVU0Hr1G024560 | EnsemblPlants:HORVU0Hr1G024560.2 |
| InterPro:IPR036376 | PFAM:PF00016 | ScanProsite:PS00157 | PANTHER:PTHR42704 | PANTHER:PTHR42704:SF2 | InterPro:RuBisCO_lsu_C |
| InterPro:RuBisCO_lsu_C_sf | InterPro:RuBisCo_large_chain_AS | SUPFAM:SSF51649 | TMHMM:TMhelix | UniParc:UPI000B46319D | : |
Description
No Description!
Coordinates
chrchrUn:+:127763262..127837011
Molecular Weight (calculated)
16712.4 Da
IEP (calculated)
5.746
GRAVY (calculated)
0.029
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVLYWDVLL NQIGIIRKNY GRACYECLRG GLDFTKDDEN VNSQPFMRWR DRFVFCAEAI YKSQAETGEI KGHYLNATAG TCEEMIKRAV FARELGVPIV
101: MHDYLTGDSP QILLWLTIAA TMAYFFTFTV QCMQLLIDRK IMDW
101: MHDYLTGDSP QILLWLTIAA TMAYFFTFTV QCMQLLIDRK IMDW
001: MNNAAKRADC WFGAKNYGRA VYECLRGGLY FTKDDENVNS QPFMRWRDRF LFCAEAVYKA QAETGGIKGH YLNATAGTCE EMIKRAVFAR ELGVPIVMHD
101: YLNRGIHRKY
101: YLNRGIHRKY
Arabidopsis Description
ORF110APutative uncharacterized mitochondrial protein AtMg00280 [Source:UniProtKB/Swiss-Prot;Acc:P93292]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.