Factsheet for TraesCS6A01G231700.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	golgi, plasma membrane, vacuole
iPSORT:	secretory
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016919_P001	Maize	plasma membrane	65.23	74.27
Os02t0574100-01	Rice	cytosol, peroxisome, plasma membrane	73.87	72.59
TraesCS1A01G064900.1	Wheat	plasma membrane	70.33	68.19
TraesCS2A01G341400.1	Wheat	peroxisome, plasma membrane, vacuole	57.37	56.92
GSMUA_Achr3P06440_001	Banana	golgi, plasma membrane, vacuole	55.01	55.01
TraesCS2A01G340700.1	Wheat	plasma membrane	53.63	53.11
TraesCS2A01G340600.1	Wheat	peroxisome, plasma membrane, vacuole	52.46	52.35
GSMUA_Achr3P06460_001	Banana	peroxisome, plasma membrane, vacuole	51.08	52.0
TraesCS2A01G340900.1	Wheat	peroxisome, plasma membrane, vacuole	50.49	50.69
TraesCS2A01G340800.1	Wheat	peroxisome, plasma membrane, vacuole	50.69	50.1
VIT_18s0001g05570.t01	Wine grape	plasma membrane	49.12	50.0
TraesCS5A01G515200.1	Wheat	plasma membrane	49.9	49.32
AT1G34580.1	Thale cress	cytosol, golgi, plasma membrane	47.35	47.63
KRH62357	Soybean	plasma membrane	46.95	47.14
KRH53073	Soybean	plasma membrane	46.76	46.76
KRH16713	Soybean	plasma membrane	46.17	46.26
KRH16714	Soybean	plasma membrane	45.97	46.15
TraesCS3A01G475200.1	Wheat	plasma membrane	45.97	46.06
KRH62355	Soybean	plasma membrane	45.78	45.87
CDY66862	Canola	plasma membrane	45.58	45.85
PGSC0003DMT400016373	Potato	plasma membrane	46.17	45.72
CDX91766	Canola	golgi, plasma membrane, vacuole	45.19	45.63
KRH62356	Soybean	plasma membrane	45.58	45.58
KRH18902	Soybean	plasma membrane	44.79	45.42
Solyc04g074070.1.1	Tomato	plasma membrane	45.19	45.19
TraesCS3A01G102800.1	Wheat	golgi, mitochondrion, plasma membrane, vacuole	45.19	45.1
TraesCS2A01G259500.1	Wheat	plasma membrane	45.78	45.07
TraesCS2A01G205500.1	Wheat	plasma membrane	45.58	44.11
TraesCS4A01G384900.1	Wheat	peroxisome, plasma membrane, vacuole	44.4	44.05
TraesCS5A01G001100.1	Wheat	golgi, plasma membrane, vacuole	44.6	43.99
TraesCS7A01G288800.1	Wheat	plastid	44.01	43.84
TraesCS7A01G085900.1	Wheat	plasma membrane	44.01	43.58
TraesCS3A01G475400.1	Wheat	peroxisome	23.58	43.01
TraesCS5A01G226500.1	Wheat	plasma membrane	43.81	42.8
TraesCS4A01G066200.1	Wheat	plasma membrane	43.03	42.52
TraesCS1A01G219500.1	Wheat	plasma membrane	41.06	40.98
TraesCS4A01G314900.1	Wheat	plasma membrane	41.26	40.86
TraesCS6A01G351600.1	Wheat	cytosol, peroxisome, plasma membrane	28.68	40.67
Bra036755.1-P	Field mustard	plasma membrane	44.99	40.6
TraesCS5A01G226700.1	Wheat	plasma membrane	40.47	39.62
TraesCS5A01G542600.2	Wheat	plasma membrane	40.86	39.54
TraesCS5A01G226800.1	Wheat	plasma membrane	40.86	39.39
TraesCS1A01G341100.1	Wheat	plasma membrane	39.29	39.14
TraesCS6A01G134000.1	Wheat	plasma membrane	37.92	36.9
TraesCS5A01G182600.1	Wheat	plasma membrane	37.52	36.11

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216
ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF126	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt
InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6A01G231700	EnsemblPlants:TraesCS6A01G231700.1	TIGR:cd06174
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:438271712..438274344

Molecular Weight (calculated)

55083.1 Da

IEP (calculated)

8.863

GRAVY (calculated)

0.659

Length

509 amino acids

Sequence
(BLAST)

001: MCDGRALAVG AGYGAGKITF TVVMSCLTAA SGGLILGYDV GITGGLTQME SFLEAFFPEI LRKMSNAKQD TYCIFDSQLL NTFVSSFYLA GMLASPIAGH
101: LTRTLGRKNS MLIGGLLFLA GALLNFTAVN IEMLIIGRIL LGVAVGFTSL SAPLYLAEIA PARWRGAFTS TFHFFLNVGL FMADLVDYGA NTIPRWGWRL
201: SLGIGIVPAG FIVVDAALIP DTPNSLVLRG KVDEARASLR RIRGLDADIN AELQDIIQAA EEDKMHESGA LRRLGRREYR PHLVMAVAMT VFFELTGVIV
301: VSIFTPLLFY TIGFTSQKAI LGSIITDVVS LASIVVAGLV VDRFGRRSLF FLGGVVLILS LVAMAWIFGA QLGTNGEVAM PRGYAMAVVA LVCVYTAGFG
401: VSWGPLSWVI TSEIFPLEVR SSALGLSGAI SGLLTFAQSQ SFLEMLCRFK YITFGYYAWW VVVMTVFVAV FLPETKGVPI ESMGAVWAQH WYWRRFVKPA
501: PATRANGPV

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.