Factsheet for TraesCS4A01G384900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, plasma membrane

Predictor Summary:

plastid 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plasma membrane, vacuole
Any Predictor:	peroxisome, plasma membrane, vacuole
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G085900.1	Wheat	plasma membrane	96.3	96.11
TraesCS7D01G080200.1	Wheat	peroxisome, plasma membrane, vacuole	95.32	95.51
HORVU7Hr1G019280.1	Barley	peroxisome, plasma membrane, vacuole	95.32	95.14
HORVU7Hr1G019240.1	Barley	golgi, mitochondrion, plasma membrane	44.25	94.58
EER89165	Sorghum	cytosol, peroxisome, plasma membrane	81.29	80.04
Zm00001d045395_P001	Maize	plasma membrane	80.7	79.92
TraesCS3A01G102800.1	Wheat	golgi, mitochondrion, plasma membrane, vacuole	68.03	68.43
GSMUA_Achr6P36920_001	Banana	plasma membrane	60.43	67.25
CDY23062	Canola	golgi, plasma membrane, vacuole	49.32	59.25
Bra012948.1-P	Field mustard	plasma membrane	57.89	58.46
CDY02138	Canola	golgi, plasma membrane, vacuole	48.54	58.31
AT5G61520.1	Thale cress	plasma membrane	58.28	58.17
TraesCS1A01G219500.1	Wheat	plasma membrane	55.17	55.49
TraesCS2A01G205500.1	Wheat	plasma membrane	55.17	53.8
TraesCS5A01G542600.2	Wheat	plasma membrane	54.78	53.42
TraesCS2A01G259500.1	Wheat	plasma membrane	53.22	52.8
TraesCS3A01G475200.1	Wheat	plasma membrane	52.24	52.76
TraesCS7A01G288800.1	Wheat	plastid	51.46	51.66
TraesCS5A01G001100.1	Wheat	golgi, plasma membrane, vacuole	51.85	51.55
TraesCS3A01G475400.1	Wheat	peroxisome	27.68	50.9
TraesCS5A01G226500.1	Wheat	plasma membrane	50.29	49.52
TraesCS4A01G066200.1	Wheat	plasma membrane	48.93	48.74
TraesCS4A01G314900.1	Wheat	plasma membrane	48.73	48.64
TraesCS5A01G226700.1	Wheat	plasma membrane	48.93	48.27
TraesCS6A01G351600.1	Wheat	cytosol, peroxisome, plasma membrane	33.33	47.63
TraesCS5A01G182600.1	Wheat	plasma membrane	48.93	47.45
TraesCS1A01G341100.1	Wheat	plasma membrane	46.98	47.16
TraesCS2A01G341400.1	Wheat	peroxisome, plasma membrane, vacuole	46.98	46.98
TraesCS5A01G226800.1	Wheat	plasma membrane	48.34	46.97
TraesCS2A01G340600.1	Wheat	peroxisome, plasma membrane, vacuole	45.22	45.49
TraesCS2A01G340700.1	Wheat	plasma membrane	44.83	44.75
TraesCS2A01G340900.1	Wheat	peroxisome, plasma membrane, vacuole	44.05	44.58
TraesCS5A01G515200.1	Wheat	plasma membrane	44.64	44.47
TraesCS6A01G231700.1	Wheat	golgi, plasma membrane, vacuole	44.05	44.4
TraesCS6A01G134000.1	Wheat	plasma membrane	44.25	43.4
TraesCS2A01G340800.1	Wheat	peroxisome, plasma membrane, vacuole	43.27	43.11
TraesCS1A01G064900.1	Wheat	plasma membrane	43.66	42.67

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216
ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF30	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt
InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4A01G384900	EnsemblPlants:TraesCS4A01G384900.1	TIGR:cd06174
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:662325114..662326655

Molecular Weight (calculated)

54279.7 Da

IEP (calculated)

10.235

GRAVY (calculated)

0.540

Length

513 amino acids

Sequence
(BLAST)

001: MAAGSVGVSE SNDGGGGGRV TMFVVLSCIT AGMGGAIFGY DIGIAGGVSS MEPFLRKFFP EVYRRMKGDS HVSNYCKFDS QMLTAFTSSL YVAGLLTTFL
101: ASGVTARLGR RPSMLLGGAA FLAGAAVGGS SLNVYMAILG RVLLGVGLGF ANQAVPLYLS EMAPPRHRGA FSNGFQFSVG VGALAANVIN FGTEKIKGGW
201: GWRVSLSLAA VPAGLLLVGA VFLPETPNSL VQQGKDRRDV ALLLRKIRGI HDVDHELDGI VAAADSATAA GSSGLRMLLT QRRYRPQLVM AVAIPFFQQV
301: TGINAIAFYA PVLLRTIGMG ESASLLSSVV TGVVGAASTL LSMFLVDRFG RRTLFLAGGT QMLGSQLLIG AIMAAKLGDD GGVSKGWAAT LIFLIAVYVA
401: GFGWSWGPLG WLVPSEIFPL EVRSSGQGVT VATSFVFTVF VAQTFLAMLC RMRAGIFFFF AAWLAAMTAF VYLLLPETRG VPIEQVDRVW REHWFWRRVL
501: GMGSEEAPAS GKL

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.