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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY23062 Canola golgi, plasma membrane, vacuole 73.15 88.06
CDY02138 Canola golgi, plasma membrane, vacuole 72.37 87.12
Bra012948.1-P Field mustard plasma membrane 85.99 87.01
HORVU7Hr1G019240.1 Barley golgi, mitochondrion, plasma membrane 28.4 60.83
Zm00001d045395_P001 Maize plasma membrane 59.53 59.07
GSMUA_Achr6P36920_001 Banana plasma membrane 52.92 59.0
TraesCS7D01G080200.1 Wheat peroxisome, plasma membrane, vacuole 58.56 58.79
TraesCS7A01G085900.1 Wheat plasma membrane 58.56 58.56
EER89165 Sorghum cytosol, peroxisome, plasma membrane 59.34 58.54
TraesCS4A01G384900.1 Wheat peroxisome, plasma membrane, vacuole 58.17 58.28
HORVU7Hr1G019280.1 Barley peroxisome, plasma membrane, vacuole 57.78 57.78
Os09t0268300-02 Rice plasma membrane 56.61 56.95
EES18290 Sorghum plasma membrane 50.97 54.58
TraesCS1B01G454800.1 Wheat golgi, plasma membrane, vacuole 52.53 53.57
Zm00001d032906_P001 Maize plasma membrane 51.95 52.56
AT4G21480.1 Thale cress plasma membrane 50.97 52.19
HORVU1Hr1G092330.5 Barley golgi, plasma membrane 51.75 52.16
HORVU3Hr1G018700.2 Barley golgi, mitochondrion, plasma membrane, vacuole 51.95 52.15
TraesCS3B01G120300.1 Wheat plasma membrane 46.69 52.06
HORVU3Hr1G018740.2 Barley golgi, mitochondrion, plasma membrane, vacuole 51.95 51.95
TraesCS3A01G102800.1 Wheat golgi, mitochondrion, plasma membrane, vacuole 51.36 51.76
KXG28819 Sorghum golgi, plasma membrane, vacuole 52.72 51.72
TraesCS3D01G105000.1 Wheat golgi, plasma membrane, vacuole 51.17 51.37
AT1G11260.1 Thale cress plasma membrane 51.75 50.96
AT1G34580.1 Thale cress cytosol, golgi, plasma membrane 49.61 50.4
AT3G19930.1 Thale cress plasma membrane 50.19 50.19
Os11t0594000-01 Rice cytosol, mitochondrion, plasma membrane, vacuole 49.81 49.04
AT1G50310.1 Thale cress plasma membrane 48.05 47.78
AT4G02050.1 Thale cress plasma membrane 47.67 47.76
AT5G26340.1 Thale cress plasma membrane 48.44 47.34
AT5G23270.1 Thale cress plasma membrane 46.69 46.69
AT3G19940.1 Thale cress plasma membrane 46.5 46.5
AT1G07340.1 Thale cress plasma membrane 44.94 46.39
AT1G77210.1 Thale cress plasma membrane 44.16 45.04
AT5G26250.1 Thale cress plasma membrane 43.0 43.59
AT3G05960.1 Thale cress plasma membrane 42.61 43.2
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6EntrezGene:836273ProteinID:AED97478.1ProteinID:AED97479.1EMBL:AJ002399
EMBL:AK317296ArrayExpress:AT5G61520EnsemblPlantsGene:AT5G61520RefSeq:AT5G61520TAIR:AT5G61520RefSeq:AT5G61520-TAIR-G
EnsemblPlants:AT5G61520.1TAIR:AT5G61520.1EMBL:AY128303UniProt:B9DGV5ProteinID:BAB08997.1EMBL:BT000560
GO:GO:0003674GO:GO:0005215GO:GO:0005351GO:GO:0005355GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0008643GO:GO:0015293GO:GO:0015992GO:GO:0016020GO:GO:0016021
GO:GO:0022857GO:GO:0035428GO:GO:0046323GO:GO:0055085GO:GO:1902600GO:GO:1904659
InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfRefSeq:NP_001119473.1RefSeq:NP_200960.2
PFAM:PF00083PO:PO:0000013PO:PO:0000037PO:PO:0000293PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0004507PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0020030PO:PO:0025022
PO:PO:0025281PRINTS:PR00171ScanProsite:PS00216ScanProsite:PS00217PFscan:PS50850PANTHER:PTHR23500
PANTHER:PTHR23500:SF30UniProt:Q8L7R8SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879
TMHMM:TMhelixUniParc:UPI000009E1F7SEG:seg:::
Description
STP3AT5G61520 protein [Source:UniProtKB/TrEMBL;Acc:B9DGV5]
Coordinates
chr5:-:24739026..24741401
Molecular Weight (calculated)
55870.7 Da
IEP (calculated)
9.669
GRAVY (calculated)
0.454
Length
514 amino acids
Sequence
(BLAST)
001: MVAEEARKEA MAKSVSGGKI TYFVVASCVM AAMGGVIFGY DIGVSGGVMS MGPFLKRFFP KVYKLQEEDR RRRGNSNNHY CLFNSQLLTS FTSSLYVSGL
101: IATLLASSVT RSWGRKPSIF LGGVSFLAGA ALGGSAQNVA MLIIARLLLG VGVGFANQSV PLYLSEMAPA KYRGAISNGF QLCIGIGFLS ANVINYETQN
201: IKHGWRISLA TAAIPASILT LGSLFLPETP NSIIQTTGDV HKTELMLRRV RGTNDVQDEL TDLVEASSGS DTDSNAFLKL LQRKYRPELV MALVIPFFQQ
301: VTGINVVAFY APVLYRTVGF GESGSLMSTL VTGIVGTSST LLSMLVVDRI GRKTLFLIGG LQMLVSQVTI GVIVMVADVH DGVIKEGYGY AVVVLVCVYV
401: AGFGWSWGPL GWLVPSEIFP LEIRSVAQSV TVAVSFVFTF AVAQSAPPML CKFRAGIFFF YGGWLVVMTV AVQLFLPETK NVPIEKVVGL WEKHWFWRRM
501: TSKRDIQETT ILSH
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.