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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane, golgi, vacuole

Predictor Summary:
  • mitochondrion 2
  • golgi 1
  • vacuole 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion, plasma membrane, vacuole
Any Predictor:golgi, mitochondrion, plasma membrane, vacuole
iPSORT:mitochondrion
MultiLoc:golgi
TargetP:mitochondrion
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G018700.2 Barley golgi, mitochondrion, plasma membrane, vacuole 99.61 100.0
TraesCS3B01G120300.1 Wheat plasma membrane 85.41 95.23
TraesCS3D01G105000.1 Wheat golgi, plasma membrane, vacuole 94.16 94.53
TraesCS3A01G102800.1 Wheat golgi, mitochondrion, plasma membrane, vacuole 93.58 94.31
HORVU1Hr1G092330.5 Barley golgi, plasma membrane 73.93 74.51
Zm00001d032906_P001 Maize plasma membrane 71.6 72.44
Os11t0594000-01 Rice cytosol, mitochondrion, plasma membrane, vacuole 73.35 72.22
KXG28819 Sorghum golgi, plasma membrane, vacuole 73.15 71.76
HORVU7Hr1G019280.1 Barley peroxisome, plasma membrane, vacuole 67.32 67.32
HORVU7Hr1G019240.1 Barley golgi, mitochondrion, plasma membrane 30.54 65.42
GSMUA_Achr6P36920_001 Banana plasma membrane 52.92 59.0
CDY02138 Canola golgi, plasma membrane, vacuole 45.33 54.57
CDY23062 Canola golgi, plasma membrane, vacuole 45.33 54.57
Bra012948.1-P Field mustard plasma membrane 53.11 53.74
AT5G61520.1 Thale cress plasma membrane 51.95 51.95
HORVU5Hr1G054140.1 Barley golgi, mitochondrion, plastid 52.92 51.61
HORVU5Hr1G065630.4 Barley cytosol 50.58 50.0
HORVU5Hr1G000380.1 Barley golgi, plasma membrane 50.39 49.9
HORVU1Hr1G056010.7 Barley peroxisome, plasma membrane, vacuole 51.17 49.81
HORVU2Hr1G041080.6 Barley plasma membrane 51.17 49.53
HORVU3Hr1G102860.5 Barley plasma membrane 49.03 48.55
HORVU7Hr1G069030.1 Barley plasma membrane 50.0 48.13
HORVU5Hr1G065660.1 Barley plasma membrane 48.83 46.74
HORVU3Hr1G102840.5 Barley plasma membrane 47.86 46.59
HORVU5Hr1G055850.2 Barley plasma membrane 46.89 45.47
HORVU2Hr1G079620.3 Barley golgi, plasma membrane 44.16 44.95
HORVU4Hr1G084740.3 Barley golgi, plasma membrane 44.55 44.38
HORVU1Hr1G013480.4 Barley plasma membrane 44.94 44.08
HORVU1Hr1G075970.1 Barley peroxisome, plasma membrane 44.75 41.74
HORVU2Hr1G079690.3 Barley peroxisome, plasma membrane, vacuole 41.83 41.59
HORVU6Hr1G084290.24 Barley golgi, plasma membrane 45.14 41.43
HORVU2Hr1G079790.7 Barley golgi 41.25 41.16
HORVU6Hr1G025520.1 Barley plasma membrane 41.25 40.54
HORVU2Hr1G079700.3 Barley cytosol, peroxisome 41.44 37.57
HORVU2Hr1G064160.1 Barley peroxisome 38.33 36.89
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6UniProt:A0A287KBB7ncoils:CoilGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857
GO:GO:0055085EnsemblPlantsGene:HORVU3Hr1G018740EnsemblPlants:HORVU3Hr1G018740.2InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-like
InterPro:MFS_trans_sfPFAM:PF00083PRINTS:PR00171ScanProsite:PS00216ScanProsite:PS00217PFscan:PS50850
PANTHER:PTHR23500PANTHER:PTHR23500:SF127SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879
TMHMM:TMhelixUniParc:UPI000B4831E1SEG:seg:::
Description
No Description!
Coordinates
chrchr3H:+:48855348..48858369
Molecular Weight (calculated)
55029.8 Da
IEP (calculated)
9.598
GRAVY (calculated)
0.538
Length
514 amino acids
Sequence
(BLAST)
001: MAVGFAGAGE DQRRHGGRVT AFAALSCITA AMGGAIFGYD IGTAGGVSSM EPFLRDFFPD VHRRMQAGAG VGNYCKFDSQ LLTLFTSSLY VSGLLTAVLV
101: ASWFTERHGR RPSMILGGLA YLGGAAVSGG AVNVYMAILG RALLGVGLGF ANQAVPLYLS EMAPARYRGA FSNGFQFSLC LGALAATIVN YGAEKIKAGW
201: GWRLSLGLAG LPAVLLTVGA IFLPETPNSL IQQGKGLGEV KALLQKIRGI DAVDEELDDI AAANATGQAG DNGLRMILSQ RRYRPQLAMA ILIPSFTQLT
301: GINAIGFYAP VLLRTIGMSE SAALLSTIVM VIVSSASTFA SMLLVDRFGR RTLLILGGVQ MFLSEVLIGG IMAAKLGDEG QVSRTYAVVL IFLIGVYSTG
401: FGWSWGPLSW LVPSEIFPLE VRSAGQSITV ASGFVFTILV AQYFLAMLCR LKAWLFFFFA GWIVVMTAFA YLFLPETKGI PIEKIENLWG KHWYWKRVVG
501: VEEVRAGQKG QVQL
Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)
001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV
Arabidopsis Description
STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.