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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • mitochondrion 1
  • golgi 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, mitochondrion, plasma membrane
iPSORT:mitochondrion
MultiLoc:golgi
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G232900.1 Wheat plasma membrane 96.23 97.15
TraesCS2A01G205500.1 Wheat plasma membrane 96.23 97.15
Zm00001d021775_P001 Maize plasma membrane 90.02 91.22
EER99540 Sorghum golgi, plasma membrane, vacuole 91.15 91.15
Os07t0559700-00 Rice plasma membrane 90.4 90.57
GSMUA_Achr9P02830_001 Banana plasma membrane 71.0 78.05
GSMUA_Achr9P24550_001 Banana golgi, plasma membrane, vacuole 76.27 77.88
GSMUA_Achr2P14120_001 Banana plasma membrane 75.33 76.63
GSMUA_Achr8P03770_001 Banana golgi, plasma membrane, vacuole 69.87 76.34
HORVU3Hr1G102860.5 Barley plasma membrane 72.13 73.8
HORVU5Hr1G054140.1 Barley golgi, mitochondrion, plastid 70.24 70.78
HORVU3Hr1G102840.5 Barley plasma membrane 69.49 69.89
HORVU7Hr1G069030.1 Barley plasma membrane 67.98 67.6
Solyc01g008240.2.1 Tomato peroxisome, plasma membrane, vacuole 62.71 65.94
HORVU5Hr1G000380.1 Barley golgi, plasma membrane 64.22 65.7
PGSC0003DMT400042165 Potato peroxisome, plasma membrane, vacuole 62.34 65.42
CDY62955 Canola extracellular, plasma membrane 25.42 64.9
KRH40901 Soybean plasma membrane 62.52 64.84
KRG90624 Soybean plasma membrane 62.34 64.77
CDY53930 Canola golgi, plasma membrane, vacuole 62.9 64.73
Bra039642.1-P Field mustard golgi, plasma membrane, vacuole 62.9 64.73
KRH40905 Soybean plasma membrane 62.34 64.65
CDY29325 Canola golgi, plasma membrane, vacuole 62.71 64.53
AT1G50310.1 Thale cress plasma membrane 62.34 64.02
KRH36130 Soybean plasma membrane 61.58 63.99
CDY66084 Canola golgi, plasma membrane, vacuole 44.44 63.96
Bra018841.1-P Field mustard golgi, plasma membrane, vacuole 61.96 63.76
CDY42509 Canola golgi, plasma membrane, vacuole 61.96 63.76
CDY22788 Canola golgi, plasma membrane, vacuole 61.96 63.76
Bra038243.1-P Field mustard plasma membrane 61.02 63.41
Bra038245.1-P Field mustard plasma membrane 61.02 63.41
CDY33432 Canola plasma membrane 61.02 63.41
CDY33434 Canola plasma membrane 60.83 63.21
Bra001766.1-P Field mustard plasma membrane 61.02 63.03
AT3G19940.1 Thale cress plasma membrane 60.83 62.84
AT3G19930.1 Thale cress plasma membrane 60.83 62.84
CDY33433 Canola cytosol, peroxisome, plasma membrane 35.03 62.84
CDY62951 Canola plasma membrane 51.41 62.76
CDY68476 Canola plasma membrane 12.99 62.73
CDY33431 Canola plasma membrane 50.66 62.7
CDX82272 Canola plasma membrane 50.66 62.7
Bra038242.1-P Field mustard plasma membrane 60.64 62.65
CDY25359 Canola plasma membrane 50.47 62.47
CDY36072 Canola plasma membrane 50.47 62.47
CDY38688 Canola plasma membrane 50.66 62.41
AT5G23270.1 Thale cress plasma membrane 60.08 62.06
Bra022468.1-P Field mustard plasma membrane 55.74 61.28
CDY62952 Canola golgi, plasma membrane, vacuole 60.64 61.22
CDY24593 Canola plasma membrane 50.47 60.91
CDY02218 Canola plasma membrane 48.78 59.95
CDY45759 Canola plasma membrane 58.0 59.0
Bra013029.1-P Field mustard golgi, plasma membrane, vacuole 41.62 58.62
HORVU2Hr1G064160.1 Barley peroxisome 58.19 57.87
HORVU5Hr1G065630.4 Barley cytosol 54.99 56.15
HORVU6Hr1G025520.1 Barley plasma membrane 54.24 55.07
HORVU7Hr1G019280.1 Barley peroxisome, plasma membrane, vacuole 53.11 54.86
CDY62956 Canola cytosol 4.14 53.66
HORVU7Hr1G019240.1 Barley golgi, mitochondrion, plasma membrane 24.11 53.33
HORVU5Hr1G065660.1 Barley plasma membrane 52.73 52.14
HORVU1Hr1G056010.7 Barley peroxisome, plasma membrane, vacuole 51.79 52.08
HORVU3Hr1G018700.2 Barley golgi, mitochondrion, plasma membrane, vacuole 49.53 51.37
HORVU3Hr1G018740.2 Barley golgi, mitochondrion, plasma membrane, vacuole 49.53 51.17
HORVU2Hr1G079620.3 Barley golgi, plasma membrane 48.4 50.89
HORVU1Hr1G092330.5 Barley golgi, plasma membrane 48.78 50.78
HORVU6Hr1G084290.24 Barley golgi, plasma membrane 51.22 48.57
HORVU5Hr1G055850.2 Barley plasma membrane 48.21 48.3
HORVU1Hr1G075970.1 Barley peroxisome, plasma membrane 50.09 48.28
HORVU4Hr1G084740.3 Barley golgi, plasma membrane 46.33 47.67
HORVU2Hr1G079790.7 Barley golgi 45.95 47.38
HORVU1Hr1G013480.4 Barley plasma membrane 45.39 45.99
HORVU2Hr1G079690.3 Barley peroxisome, plasma membrane, vacuole 43.31 44.49
HORVU2Hr1G079700.3 Barley cytosol, peroxisome 45.76 42.86
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6UniProt:A0A287HT74GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
EnsemblPlantsGene:HORVU2Hr1G041080EnsemblPlants:HORVU2Hr1G041080.6InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sf
PFAM:PF00083PRINTS:PR00171ScanProsite:PS00216ScanProsite:PS00217PFscan:PS50850PANTHER:PTHR23500
PANTHER:PTHR23500:SF336SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879TMHMM:TMhelix
UniParc:UPI000B4863C3SEG:seg::::
Description
No Description!
Coordinates
chrchr2H:+:201029243..201031651
Molecular Weight (calculated)
58220.7 Da
IEP (calculated)
8.944
GRAVY (calculated)
0.485
Length
531 amino acids
Sequence
(BLAST)
001: MAGGAVVNTG GGKDYPGKLT MFVLFACIVA ATGGLIFGYD IGISGGVTSM NPFLMKFFPG VYHKEQEAER NQSNQYCKFD SQLLTMFTSS LYLAALVASF
101: FAATVSRVAG RKWSMFAGGV TFLVGAALNG AAKNVLMLIL GRVLLGIGVG FANQSVPVYL SEMAPARLRG MLNIGFQLMV TIGILCANLI NYGTSKIKGG
201: WGWRVSLALA AVPAGIIAIG ALFLPDTPNS LIDRGYTDDA KKMLRRVRGT DDVEEEYSDL VAASDESKLV SHPWRNILQR RYRPQLTFAI AIPFFQQLTG
301: INVIMFYAPV LFKTLGFADD ASLMSAVITG LVNVFATFVS IVTVDRLGRR KLFLQGGTQM LACQIVVGSL IGAKFGFTGV ADIPRGYAAF VVFFICAYVA
401: GFAWSWGPLG WLVPSEIFPL EIRSAGQSIT VSMNMLCTFI IAQAFLPMLC RFKFMLFFFF GAWVIVMTLF VAFFLPETKN VPIEEMVLVW KAHWYWGRFI
501: RDEDVHVGAD VEMRSNGNGK IQDDDEQSVR H
Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)
001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV
Arabidopsis Description
STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.