Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY33431 Canola plasma membrane 99.3 99.77
CDY25359 Canola plasma membrane 97.45 97.9
CDY62951 Canola plasma membrane 98.61 97.7
CDX82272 Canola plasma membrane 95.36 95.8
CDY36072 Canola plasma membrane 95.36 95.8
CDY24593 Canola plasma membrane 97.22 95.23
AT3G19930.1 Thale cress plasma membrane 94.2 78.99
CDY68476 Canola plasma membrane 15.08 59.09
CDY62955 Canola extracellular, plasma membrane 26.45 54.81
CDY02218 Canola plasma membrane 54.29 54.17
TraesCS2A01G259500.1 Wheat plasma membrane 64.27 53.58
TraesCS2D01G264200.1 Wheat plasma membrane 64.27 53.58
Os07t0106200-02 Rice plasma membrane 64.27 53.47
TraesCS2B01G282400.1 Wheat plasma membrane 64.04 53.38
Zm00001d021775_P001 Maize plasma membrane 63.34 52.1
CDY53930 Canola golgi, plasma membrane, vacuole 62.18 51.94
EER97830 Sorghum plasma membrane 62.65 51.92
Zm00001d018627_P001 Maize plasma membrane 62.88 51.82
TraesCS3B01G518900.1 Wheat plasma membrane 61.72 51.75
TraesCS2B01G232900.1 Wheat plasma membrane 63.11 51.71
TraesCS3D01G470200.1 Wheat plasma membrane 61.48 51.56
CDY29325 Canola golgi, plasma membrane, vacuole 61.72 51.55
TraesCS2A01G205500.1 Wheat plasma membrane 62.88 51.52
GSMUA_Achr2P10700_001 Banana golgi, plasma membrane, vacuole 57.08 51.36
CDY22788 Canola golgi, plasma membrane, vacuole 61.48 51.36
CDY42509 Canola golgi, plasma membrane, vacuole 61.48 51.36
Os07t0559700-00 Rice plasma membrane 62.88 51.13
HORVU3Hr1G102860.5 Barley plasma membrane 61.48 51.06
EER99540 Sorghum golgi, plasma membrane, vacuole 62.88 51.04
CDY33432 Canola plasma membrane 60.32 50.88
CDY33434 Canola plasma membrane 60.32 50.88
TraesCS3D01G470300.1 Wheat plasma membrane 59.86 50.79
HORVU2Hr1G041080.6 Barley plasma membrane 62.41 50.66
TraesCS3B01G518800.1 Wheat plasma membrane 59.63 50.59
TraesCS3A01G475200.1 Wheat plasma membrane 59.4 50.39
TraesCS7A01G288800.1 Wheat plastid 59.63 50.29
TraesCS7D01G286600.1 Wheat plastid 59.63 50.29
Zm00001d049467_P001 Maize plasma membrane 59.86 50.19
CDY66084 Canola golgi, plasma membrane, vacuole 42.92 50.14
TraesCS7B01G185800.1 Wheat plastid 59.16 49.9
Os08t0178200-02 Rice golgi, plasma membrane, plastid, vacuole 59.86 49.71
Solyc01g008240.2.1 Tomato peroxisome, plasma membrane, vacuole 57.77 49.31
EES13444 Sorghum plasma membrane 59.16 48.94
GSMUA_Achr4P29880_001 Banana plasma membrane 54.99 48.87
CDY62952 Canola golgi, plasma membrane, vacuole 59.63 48.86
OQU85892 Sorghum plasma membrane 59.16 48.76
CDY34842 Canola plasma membrane 58.93 48.75
CDX97945 Canola plasma membrane 58.93 48.66
CDY45759 Canola plasma membrane 58.93 48.66
HORVU3Hr1G102840.5 Barley plasma membrane 59.4 48.48
CDY19352 Canola plasma membrane 58.7 48.47
CDX82827 Canola golgi, plasma membrane, vacuole 57.54 48.34
PGSC0003DMT400042165 Potato peroxisome, plasma membrane, vacuole 56.61 48.22
HORVU5Hr1G054140.1 Barley golgi, mitochondrion, plastid 58.7 48.01
CDX79066 Canola plasma membrane 57.08 47.95
HORVU7Hr1G069030.1 Barley plasma membrane 59.16 47.75
TraesCS3A01G475400.1 Wheat peroxisome 30.86 47.67
Os01t0567500-01 Rice plasma membrane 56.15 47.17
Os01t0567600-00 Rice plasma membrane 55.68 46.88
Os09t0297300-00 Rice plasma membrane 56.84 46.85
CDY33433 Canola cytosol, peroxisome, plasma membrane 32.02 46.62
EES03141 Sorghum golgi, plasma membrane, vacuole 54.99 46.56
CDY02138 Canola golgi, plasma membrane, vacuole 45.94 46.37
CDY23062 Canola golgi, plasma membrane, vacuole 45.94 46.37
Zm00001d044245_P001 Maize plasma membrane 54.76 46.37
Os03t0594400-01 Rice plasma membrane 55.92 46.17
TraesCS5D01G001600.1 Wheat golgi, plasma membrane, vacuole 55.22 46.03
TraesCS5A01G001100.1 Wheat golgi, plasma membrane, vacuole 54.99 45.93
HORVU5Hr1G000380.1 Barley golgi, plasma membrane 55.22 45.86
TraesCS5B01G001000.1 Wheat golgi, plasma membrane, vacuole 54.76 45.65
Zm00001d007078_P001 Maize golgi, plasma membrane, vacuole 51.51 45.31
CDY34655 Canola plasma membrane 58.47 45.24
EER93920 Sorghum golgi, plasma membrane, vacuole 55.92 45.22
Zm00001d032409_P001 Maize plasma membrane 56.15 45.15
CDY07098 Canola plasma membrane 51.51 43.7
CDY22024 Canola plasma membrane 51.51 43.7
CDY18836 Canola plasma membrane 51.04 43.39
CDX90958 Canola plasma membrane 51.51 43.27
CDX87052 Canola peroxisome, plasma membrane, vacuole 53.13 43.05
CDY19773 Canola plasma membrane 53.13 43.05
CDY27726 Canola golgi, plasma membrane, vacuole 50.12 42.86
CDX74116 Canola plasma membrane 50.35 42.72
CDY49992 Canola golgi, plasma membrane, vacuole 50.35 42.72
CDY67102 Canola cytosol, plasma membrane, vacuole 49.65 42.54
CDY66862 Canola plasma membrane 49.88 42.49
CDY05216 Canola plasma membrane 49.65 42.46
CDY52634 Canola plasma membrane 49.19 42.32
CDX88227 Canola plasma membrane 48.96 42.28
CDX91766 Canola golgi, plasma membrane, vacuole 49.42 42.26
CDX80558 Canola plasma membrane 49.65 42.21
EES04558 Sorghum plasma membrane 49.65 41.07
CDY10269 Canola plasma membrane 46.4 40.08
CDX86492 Canola plasma membrane 46.17 39.96
HORVU2Hr1G064160.1 Barley peroxisome 49.42 39.89
CDY06700 Canola plasma membrane 46.17 39.88
Os02t0160400-01 Rice plasma membrane 48.03 39.81
HORVU6Hr1G025520.1 Barley plasma membrane 48.26 39.77
TraesCS6D01G123300.1 Wheat plasma membrane 48.26 39.77
CDY15608 Canola plasma membrane 45.94 39.76
TraesCS6A01G134000.1 Wheat plasma membrane 48.03 39.58
TraesCS6B01G162200.1 Wheat plasma membrane 48.03 39.58
CDY26777 Canola plasma membrane 41.76 39.13
CDY47467 Canola plasma membrane 44.32 38.9
Zm00001d053846_P001 Maize plasma membrane 48.49 37.93
CDX87534 Canola plasma membrane 41.76 37.42
CDX88350 Canola plasma membrane 43.39 36.59
CDX91815 Canola plasma membrane 51.74 26.55
CDY62956 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:1.20.1250.20MapMan:35.1GO:A0A078HPH9UniProt:A0A078HPH9EnsemblPlants:CDY38688ProteinID:CDY38688
ProteinID:CDY38688.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00066443001InterPro:IPR020846
InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PRINTS:PR00171ScanProsite:PS00216
PFscan:PS50850PANTHER:PTHR23500PANTHER:PTHR23500:SF357SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CS
TMHMM:TMhelixUniParc:UPI0004EF337DSEG:seg:::
Description
BnaC01g28090DBnaC01g28090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HPH9]
Coordinates
chrLK032430:+:160716..162885
Molecular Weight (calculated)
47996.7 Da
IEP (calculated)
9.922
GRAVY (calculated)
0.635
Length
431 amino acids
Sequence
(BLAST)
001: MAGGFVSQTP GVRNYNYKLT PKVFVTCFIG AFGGLIFGYD LGISGGVTQM EPFLEEFFPD VHRKMKSAHQ NEYCRFDSQL LTLFTSSLYL AALVSSLFAS
101: TITRVFGRKW SMFLGGFTFF VGSAFNGFAQ NIAMLLIGRI LLGFGVGVGF ANQSVPVYLS EMAPPNLRGA FNNGFQVAII FGIVVATIIN YFTAQLKGNI
201: GWRISLGLAC ESKQVKHPWK NILLPRYRPQ LIITCFIPFF QQLTGINVIT FYAPVLFQTL GFGSKASLLS AMVTGIIELL CTFVSVFTVD RFGRRVLFLQ
301: GGIQMLISQI AIGVMIGVKF GTVGTGNIGK TDANLIVALI CIYVAGFAWS WGPLGWLLFL TMLCHMKFRL FFFFAVFVFI MTIFIYLMLP ETKNVPIEEM
401: NRVWKAHWFW GRFIPDEAVG VSAAEMQQKS V
Best Arabidopsis Sequence Match ( AT1G50310.1 )
(BLAST)
001: MAGGAFVSEG GGGGNSYEGG VTVFVIMTCI VAAMGGLLFG YDLGISGGVT SMEEFLSKFF PEVDKQMHEA RRETAYCKFD NQLLQLFTSS LYLAALASSF
101: VASAVTRKYG RKISMFVGGV AFLIGSLFNA FATNVAMLIV GRLLLGVGVG FANQSTPVYL SEMAPAKIRG ALNIGFQMAI TIGILIANLI NYGTSQMAKN
201: GWRVSLGLAA VPAVIMVIGS FVLPDTPNSM LERGKYEQAR EMLQKIRGAD NVDEEFQDLC DACEAAKKVD NPWKNIFQQA KYRPALVFCS AIPFFQQITG
301: INVIMFYAPV LFKTLGFADD ASLISAVITG AVNVVSTLVS IYAVDRYGRR ILFLEGGIQM IVSQIVVGTL IGMKFGTTGS GTLTPATADW ILAFICLYVA
401: GFAWSWGPLG WLVPSEICPL EIRPAGQAIN VSVNMFFTFL IGQFFLTMLC HMKFGLFYFF GGMVAVMTVF IYFLLPETKG VPIEEMGRVW KQHPFWKRYM
501: PDDAVIGGGE ENYVKEV
Arabidopsis Description
STP9STP9 [Source:UniProtKB/TrEMBL;Acc:A0A178WN25]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.