CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

nucleus 1
plastid 2
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032409_P001	Maize	plasma membrane	87.99	87.5
Os03t0594400-01	Rice	plasma membrane	75.05	76.63
GSMUA_Achr2P14120_001	Banana	plasma membrane	67.17	68.58
GSMUA_Achr9P02830_001	Banana	plasma membrane	61.35	67.7
EER99540	Sorghum	golgi, plasma membrane, vacuole	67.35	67.61
EER97830	Sorghum	plasma membrane	65.48	67.12
GSMUA_Achr9P24550_001	Banana	golgi, plasma membrane, vacuole	65.48	67.12
GSMUA_Achr8P03770_001	Banana	golgi, plasma membrane, vacuole	61.16	67.08
OQU85892	Sorghum	plasma membrane	65.29	66.54
EES13444	Sorghum	plasma membrane	62.1	63.53
EES03141	Sorghum	golgi, plasma membrane, vacuole	58.91	61.69
CDY68476	Canola	plasma membrane	12.38	60.0
CDY53930	Canola	golgi, plasma membrane, vacuole	57.79	59.69
CDY29325	Canola	golgi, plasma membrane, vacuole	57.79	59.69
Bra039642.1-P	Field mustard	golgi, plasma membrane, vacuole	57.6	59.5
Bra018841.1-P	Field mustard	golgi, plasma membrane, vacuole	56.85	58.72
CDY22788	Canola	golgi, plasma membrane, vacuole	56.85	58.72
CDY42509	Canola	golgi, plasma membrane, vacuole	56.85	58.72
AT1G50310.1	Thale cress	plasma membrane	56.85	58.61
KRH40901	Soybean	plasma membrane	55.91	58.2
CDY62955	Canola	extracellular, plasma membrane	22.7	58.17
KRH40905	Soybean	plasma membrane	55.72	58.01
KRG90624	Soybean	plasma membrane	55.53	57.93
Solyc01g008240.2.1	Tomato	peroxisome, plasma membrane, vacuole	54.6	57.62
AT3G19940.1	Thale cress	plasma membrane	55.35	57.39
PGSC0003DMT400042165	Potato	peroxisome, plasma membrane, vacuole	54.41	57.31
KRH36130	Soybean	plasma membrane	54.6	56.95
CDY33432	Canola	plasma membrane	54.6	56.95
CDY66084	Canola	golgi, plasma membrane, vacuole	39.4	56.91
CDY33434	Canola	plasma membrane	54.41	56.75
Bra038243.1-P	Field mustard	plasma membrane	54.41	56.75
Bra038245.1-P	Field mustard	plasma membrane	54.41	56.75
CDY36072	Canola	plasma membrane	45.59	56.64
AT5G23270.1	Thale cress	plasma membrane	54.6	56.61
CDY62951	Canola	plasma membrane	46.15	56.55
CDX82272	Canola	plasma membrane	45.4	56.41
CDY33431	Canola	plasma membrane	45.4	56.41
Bra001766.1-P	Field mustard	plasma membrane	54.22	56.23
CDY25359	Canola	plasma membrane	45.22	56.18
AT3G19930.1	Thale cress	plasma membrane	54.03	56.03
CDY38688	Canola	plasma membrane	45.22	55.92
CDY02218	Canola	plasma membrane	45.22	55.79
Bra038242.1-P	Field mustard	plasma membrane	53.66	55.64
EER96733	Sorghum	mitochondrion, plasma membrane	53.47	55.02
CDY24593	Canola	plasma membrane	45.22	54.77
CDY62952	Canola	golgi, plasma membrane, vacuole	54.03	54.75
CDY33433	Canola	cytosol, peroxisome, plasma membrane	30.39	54.73
Bra013029.1-P	Field mustard	golgi, plasma membrane, vacuole	38.65	54.64
CDY45759	Canola	plasma membrane	53.1	54.21
Bra022468.1-P	Field mustard	plasma membrane	48.97	54.04
EER89165	Sorghum	cytosol, peroxisome, plasma membrane	51.97	53.17
EER92634	Sorghum	plasma membrane	50.47	52.03
KXG40430	Sorghum	plasma membrane	51.78	51.3
EES10921	Sorghum	peroxisome, plasma membrane, vacuole	48.97	50.88
EES04558	Sorghum	plasma membrane	48.78	49.9
EER98187	Sorghum	plasma membrane	47.47	49.41
KXG28819	Sorghum	golgi, plasma membrane, vacuole	48.22	49.05
OQU92134	Sorghum	peroxisome, plasma membrane, vacuole	47.84	48.48
OQU81689	Sorghum	extracellular, plasma membrane, vacuole	45.78	47.84
EES18290	Sorghum	plasma membrane	42.59	47.29
OQU89290	Sorghum	golgi, peroxisome, plasma membrane	33.4	46.97
KXG26442	Sorghum	peroxisome	47.65	46.86
CDY62956	Canola	cytosol	3.56	46.34
EES10919	Sorghum	peroxisome, plasma membrane, vacuole	42.59	44.42
OQU85192	Sorghum	peroxisome, plasma membrane, vacuole	39.59	43.24
EES10920	Sorghum	plasma membrane	42.21	43.19
EES11734	Sorghum	plasma membrane	38.65	39.92
KXG25760	Sorghum	plasma membrane	38.27	39.92

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	UniProt:C5WV98	EnsemblPlants:EER93920	ProteinID:EER93920	ProteinID:EER93920.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005351	GO:GO:0005355	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0035428
GO:GO:0046323	GO:GO:0055085	GO:GO:1902600	GO:GO:1904659	InterPro:IPR020846	InterPro:MFS_dom
InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217
PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF60	EnsemblPlantsGene:SORBI_3001G190200	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt
InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI0001A826A5	RefSeq:XP_002466922.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:16810398..16813198

Molecular Weight (calculated)

56722.7 Da

IEP (calculated)

8.747

GRAVY (calculated)

0.634

Length

533 amino acids

Sequence
(BLAST)

001: MAAPAVVGAG AGQGKEYPGG LTLYVLLTCA VAATGGLIVG YDIGISGGVT SMDAFLHKFF PSVYRKEQTA LGGSSSQYCK FDSQLLTAFT SSLYLAALVA
101: SFFVASVARS LGRKWSMFGG GVSFLAGAAL NAAALDVAML IVGRILLGIG VGFAALSIPI YLSEMAPHRL RGTLNNGFQL MITVGIFSAN LVNYGAAKIQ
201: GGWGWRLSLG LAAVPAAVIT VGSLFLPDTP SSLIRRGYHE QARRVLSRVR GADVDVADEY GDLVAASGAV VVRRPPWVDI LGRRHYRPQL TVAVLVPFFQ
301: QFTGINVIMF YAPVLFKTIG LGGDASLMSA VIIGLVNIVA TFVSIATVDK LGRRKLFFQG GCQMLVCQVV IGTLIGVEFG ATGDGATIPK NSAATVVAFI
401: CIYVAGFAWS WGPLAILVPS EIFPLEIRPA GQGVSVAVSM LCSFAVAQAF LPMLCHLRFG LFYFFAGWVL VMTLFVVVFL PETKGVPVEK MGTVWRTHWF
501: WGRFVADCMD GRDDENCDSA FHKGNDDIAV REP

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.