CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

nucleus 1
plastid 2
extracellular 2
plasma membrane 3
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003468_P001	Maize	peroxisome, plasma membrane, vacuole	68.82	93.35
Os04t0453400-02	Rice	plasma membrane	89.41	89.06
TraesCS2D01G318500.1	Wheat	vacuole	86.67	87.18
TraesCS2A01G340900.1	Wheat	peroxisome, plasma membrane, vacuole	86.08	86.59
TraesCS2B01G338700.1	Wheat	vacuole	86.27	81.33
HORVU2Hr1G079700.3	Barley	cytosol, peroxisome	84.71	76.19
EES10921	Sorghum	peroxisome, plasma membrane, vacuole	62.16	61.79
GSMUA_Achr3P06440_001	Banana	golgi, plasma membrane, vacuole	59.8	59.92
GSMUA_Achr3P06460_001	Banana	peroxisome, plasma membrane, vacuole	57.45	58.6
EES10920	Sorghum	plasma membrane	57.84	56.62
EES10919	Sorghum	peroxisome, plasma membrane, vacuole	55.29	55.19
KXG26442	Sorghum	peroxisome	58.63	55.17
VIT_18s0001g05570.t01	Wine grape	plasma membrane	52.16	53.2
OQU85192	Sorghum	peroxisome, plasma membrane, vacuole	50.78	53.07
AT1G34580.1	Thale cress	cytosol, golgi, plasma membrane	50.98	51.38
CDY66862	Canola	plasma membrane	50.39	50.79
CDX91766	Canola	golgi, plasma membrane, vacuole	49.8	50.4
EES11734	Sorghum	plasma membrane	50.78	50.19
KXG25760	Sorghum	plasma membrane	50.2	50.1
PGSC0003DMT400016373	Potato	plasma membrane	50.2	49.81
Solyc04g074070.1.1	Tomato	plasma membrane	49.61	49.71
KRH16713	Soybean	plasma membrane	49.41	49.61
KRH53073	Soybean	plasma membrane	49.41	49.51
KRH62356	Soybean	plasma membrane	48.63	48.72
KRH62357	Soybean	plasma membrane	48.43	48.72
OQU85892	Sorghum	plasma membrane	49.8	48.57
EER97830	Sorghum	plasma membrane	48.24	47.31
KRH18902	Soybean	plasma membrane	46.47	47.21
KRH16714	Soybean	plasma membrane	46.86	47.14
KRH62355	Soybean	plasma membrane	46.86	47.05
EER99540	Sorghum	golgi, plasma membrane, vacuole	48.43	46.52
EER96733	Sorghum	mitochondrion, plasma membrane	46.86	46.14
EER89165	Sorghum	cytosol, peroxisome, plasma membrane	46.86	45.87
EER93920	Sorghum	golgi, plasma membrane, vacuole	47.84	45.78
EES03141	Sorghum	golgi, plasma membrane, vacuole	45.69	45.78
Bra036755.1-P	Field mustard	plasma membrane	49.61	44.86
EER92634	Sorghum	plasma membrane	45.29	44.68
EES13444	Sorghum	plasma membrane	45.49	44.53
OQU89290	Sorghum	golgi, peroxisome, plasma membrane	32.16	43.27
EES18290	Sorghum	plasma membrane	40.39	42.92
KXG40430	Sorghum	plasma membrane	44.71	42.38
KXG28819	Sorghum	golgi, plasma membrane, vacuole	43.14	41.98
EER98187	Sorghum	plasma membrane	40.2	40.04
OQU92134	Sorghum	peroxisome, plasma membrane, vacuole	40.78	39.54
EES04558	Sorghum	plasma membrane	38.04	37.24

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	EntrezGene:8073409	UniProt:A0A1Z5RDM3	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	EnsemblPlants:OQU81689
ProteinID:OQU81689	ProteinID:OQU81689.1	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217
PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF2	EnsemblPlantsGene:SORBI_3006G102500	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt
InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI0001A872DD	RefSeq:XP_002447945.1	SEG:seg

Description

hypothetical protein

Coordinates

chr6:-:47277077..47281897

Molecular Weight (calculated)

54315.9 Da

IEP (calculated)

9.776

GRAVY (calculated)

0.576

Length

510 amino acids

Sequence
(BLAST)

001: MPGGAFLLNS GGGMADSGGG LTVPVVVTCL MAASGGLIFG YDIGISGGVS EMEAFLKKFF PGLLKSTARG GNKDVYCIYN NQALTAFTSS LYAFGMVGTL
101: LASRVTRRLG RQAVMLIGGS LFLAGALVNA AAANLAMLIV GRMLLGLGLG FSGQATPVYL AEVSPPRWRG GFISAFPLFI SIGYLVANLI NYGTSRIPDW
201: GWRLSLGLAA VPAAVMVAGA AFIPDTPSSL VLRGKHDDAR AALQRVRGKG VDIGAEFADI LAAAESDRRN EEGAFRRILR REYRPYLVMA VAFPVFLNLT
301: GVAVTAFFSP ILFRTVGFES DAALMGAVIL GLMNIGGILA SGFAMDRYGR KLLFVIGGAL MFTCQVAMAS IIGSQLGNGS KMPKGYAVTV LVVTLVFSAS
401: FSWSWGALYW TIPGEIYPVE VRSAGQGAAV ALNLGLNFLQ AQFFLAMLCC FKYGTFLFYA SWLVVMTAFA VAFVPETKGV PLESMAHVFA RHWYWGRFVK
501: DHQKFGEEST

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.