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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 2
  • mitochondrion 1
  • golgi 2
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d049467_P001 Maize plasma membrane 92.32 93.58
TraesCS7B01G185800.1 Wheat plastid 85.6 87.28
TraesCS7D01G286600.1 Wheat plastid 85.41 87.08
TraesCS7A01G288800.1 Wheat plastid 85.03 86.69
Os08t0178200-02 Rice golgi, plasma membrane, plastid, vacuole 86.18 86.51
HORVU7Hr1G069030.1 Barley plasma membrane 85.41 83.33
GSMUA_Achr5P26540_001 Banana extracellular, plasma membrane, vacuole 61.23 71.21
EER99540 Sorghum golgi, plasma membrane, vacuole 70.63 69.3
EER97830 Sorghum plasma membrane 68.71 68.85
GSMUA_Achr11P... Banana plasma membrane 62.19 68.5
GSMUA_Achr11P... Banana golgi, plasma membrane, plastid, vacuole 56.62 67.05
EES03141 Sorghum golgi, plasma membrane, vacuole 63.72 65.23
OQU85892 Sorghum plasma membrane 65.26 65.01
CDY62955 Canola extracellular, plasma membrane 25.14 62.98
PGSC0003DMT400042165 Potato peroxisome, plasma membrane, vacuole 60.65 62.45
EER93920 Sorghum golgi, plasma membrane, vacuole 63.53 62.1
Solyc01g008240.2.1 Tomato peroxisome, plasma membrane, vacuole 60.08 61.98
AT1G50310.1 Thale cress plasma membrane 60.84 61.32
AT5G23270.1 Thale cress plasma membrane 60.46 61.28
AT3G19940.1 Thale cress plasma membrane 60.46 61.28
CDY68476 Canola plasma membrane 12.86 60.91
KRG90624 Soybean plasma membrane 59.69 60.86
KRH36130 Soybean plasma membrane 59.69 60.86
KRH40901 Soybean plasma membrane 59.69 60.74
KRH40905 Soybean plasma membrane 59.5 60.55
CDY42509 Canola golgi, plasma membrane, vacuole 59.69 60.27
CDY29325 Canola golgi, plasma membrane, vacuole 59.69 60.27
CDY22788 Canola golgi, plasma membrane, vacuole 59.69 60.27
Bra039642.1-P Field mustard golgi, plasma membrane, vacuole 59.69 60.27
Bra018841.1-P Field mustard golgi, plasma membrane, vacuole 59.69 60.27
CDY53930 Canola golgi, plasma membrane, vacuole 59.5 60.08
CDY02218 Canola plasma membrane 49.71 59.95
AT3G19930.1 Thale cress plasma membrane 59.12 59.92
Bra038243.1-P Field mustard plasma membrane 58.73 59.88
Bra038245.1-P Field mustard plasma membrane 58.73 59.88
CDY33432 Canola plasma membrane 58.73 59.88
CDY62951 Canola plasma membrane 49.9 59.77
CDY33434 Canola plasma membrane 58.54 59.69
CDY25359 Canola plasma membrane 49.14 59.67
CDY33431 Canola plasma membrane 49.14 59.67
CDY33433 Canola cytosol, peroxisome, plasma membrane 33.78 59.46
CDY66084 Canola golgi, plasma membrane, vacuole 42.03 59.35
CDX82272 Canola plasma membrane 48.75 59.21
CDY38688 Canola plasma membrane 48.94 59.16
Bra001766.1-P Field mustard plasma membrane 58.16 58.95
Bra038242.1-P Field mustard plasma membrane 58.16 58.95
CDY36072 Canola plasma membrane 48.37 58.74
CDY24593 Canola plasma membrane 49.33 58.41
Bra022468.1-P Field mustard plasma membrane 53.93 58.18
CDY62952 Canola golgi, plasma membrane, vacuole 58.73 58.17
GSMUA_Achr10P... Banana plasma membrane 56.05 58.05
CDY45759 Canola plasma membrane 58.16 58.05
Bra013029.1-P Field mustard golgi, plasma membrane, vacuole 41.65 57.56
EER96733 Sorghum mitochondrion, plasma membrane 56.62 56.95
EES04558 Sorghum plasma membrane 55.47 55.47
EER89165 Sorghum cytosol, peroxisome, plasma membrane 54.7 54.7
EER92634 Sorghum plasma membrane 52.98 53.38
KXG28819 Sorghum golgi, plasma membrane, vacuole 51.63 51.34
KXG40430 Sorghum plasma membrane 52.98 51.3
EES18290 Sorghum plasma membrane 46.64 50.62
OQU92134 Sorghum peroxisome, plasma membrane, vacuole 50.67 50.19
OQU89290 Sorghum golgi, peroxisome, plasma membrane 36.47 50.13
EER98187 Sorghum plasma membrane 48.75 49.61
EES10921 Sorghum peroxisome, plasma membrane, vacuole 48.56 49.32
KXG26442 Sorghum peroxisome 48.94 47.05
CDY62956 Canola cytosol 3.65 46.34
OQU81689 Sorghum extracellular, plasma membrane, vacuole 44.53 45.49
OQU85192 Sorghum peroxisome, plasma membrane, vacuole 41.46 44.26
EES11734 Sorghum plasma membrane 42.8 43.22
EES10920 Sorghum plasma membrane 42.99 42.99
KXG25760 Sorghum plasma membrane 42.03 42.86
EES10919 Sorghum peroxisome, plasma membrane, vacuole 41.65 42.47
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6EntrezGene:8069681UniProt:C5YHX3EnsemblPlants:EES13444ProteinID:EES13444
ProteinID:EES13444.1GO:GO:0003674GO:GO:0005215GO:GO:0005351GO:GO:0005355GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0015992GO:GO:0016020GO:GO:0016021GO:GO:0022857
GO:GO:0035428GO:GO:0046323GO:GO:0055085GO:GO:1902600GO:GO:1904659InterPro:IPR020846
InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PRINTS:PR00171ScanProsite:PS00216
ScanProsite:PS00217PFscan:PS50850PANTHER:PTHR23500PANTHER:PTHR23500:SF74EnsemblPlantsGene:SORBI_3007G061800SUPFAM:SSF103473
InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879TMHMM:TMhelixUniParc:UPI0001A875BARefSeq:XP_002443949.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr7:+:6480119..6482337
Molecular Weight (calculated)
56261.1 Da
IEP (calculated)
7.986
GRAVY (calculated)
0.546
Length
521 amino acids
Sequence
(BLAST)
001: MAGGVVVNAA GGKTYPGHMT AFVFFTCLVA SSGGLIFGYD IGISGGVTSM DSFLKEFFPS VYAKAEANKD TNQYCKFDSQ LLTLFTSSLY LAALATSFVA
101: ASVTRVFGRK WSMFCGGLTF MAGSAMNGAA TDVMMLIMGR ILLGVGVGFA NQSVPLYLSE MAPAKLRGML NIGFQLMTTI GILAANLINF WTVKIEGGWG
201: WRIGLGLAGV PALIITVGAL VLPDTPNSLI ARGYNDDAKK VLVKIRGTDD VHDEYDDMVA ASEEASAIEH PWRNILERRY RPQLTVAALI PCFQQLTGIN
301: VIMFYAPVLF LTIGFGDDAS LMAAVITGLV NMFATMVSIV CVDRLGRRAL FLQGGTQMFV SQIVVGTMIA AQFGTAGVGT MSRNNAWLLV LFICLYVAGF
401: AWSWGPLGWL VPSEVFALEV RSAGQSIAVC VNMTLTFIIG QSFLTMLCTL KFGLFYFFAG WMFVMTAFIA LFLPETKGVP IEEMNHVWSR HWFWSKYVTV
501: DSRQHDGGGG GGGSRRSNGG V
Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)
001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV
Arabidopsis Description
STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.