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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • nucleus 1
  • plastid 2
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:plastid
iPSORT:plastid
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY29325 Canola golgi, plasma membrane, vacuole 99.61 99.61
Bra018841.1-P Field mustard golgi, plasma membrane, vacuole 95.35 95.35
AT1G50310.1 Thale cress plasma membrane 92.83 92.65
Bra038245.1-P Field mustard plasma membrane 83.72 84.54
Bra038243.1-P Field mustard plasma membrane 83.72 84.54
KRH40901 Soybean plasma membrane 68.41 68.95
KRH40905 Soybean plasma membrane 68.22 68.75
KRG90624 Soybean plasma membrane 66.86 67.51
KRH36130 Soybean plasma membrane 66.67 67.32
Solyc01g008240.2.1 Tomato peroxisome, plasma membrane, vacuole 65.7 67.13
Bra013029.1-P Field mustard golgi, plasma membrane, vacuole 48.84 66.84
PGSC0003DMT400042165 Potato peroxisome, plasma membrane, vacuole 65.5 66.8
Os07t0106200-02 Rice plasma membrane 67.05 66.8
Zm00001d018627_P001 Maize plasma membrane 67.64 66.73
TraesCS2A01G259500.1 Wheat plasma membrane 66.67 66.54
TraesCS2B01G282400.1 Wheat plasma membrane 66.67 66.54
TraesCS2D01G264200.1 Wheat plasma membrane 66.67 66.54
EER97830 Sorghum plasma membrane 66.86 66.35
TraesCS2A01G205500.1 Wheat plasma membrane 65.31 64.07
Zm00001d021775_P001 Maize plasma membrane 64.53 63.55
TraesCS2B01G232900.1 Wheat plasma membrane 64.73 63.5
Os07t0559700-00 Rice plasma membrane 64.92 63.21
HORVU2Hr1G041080.6 Barley plasma membrane 64.73 62.9
TraesCS3D01G470200.1 Wheat plasma membrane 62.6 62.84
Bra038242.1-P Field mustard plasma membrane 62.6 62.84
TraesCS3B01G518900.1 Wheat plasma membrane 62.4 62.65
Bra001766.1-P Field mustard plasma membrane 62.4 62.65
HORVU3Hr1G102860.5 Barley plasma membrane 62.98 62.62
EER99540 Sorghum golgi, plasma membrane, vacuole 64.15 62.34
TraesCS3B01G518800.1 Wheat plasma membrane 60.66 61.61
TraesCS3D01G470300.1 Wheat plasma membrane 60.27 61.22
GSMUA_Achr2P10700_001 Banana golgi, plasma membrane, vacuole 56.78 61.17
TraesCS3A01G475200.1 Wheat plasma membrane 59.88 60.83
Os08t0178200-02 Rice golgi, plasma membrane, plastid, vacuole 61.05 60.69
TraesCS7D01G286600.1 Wheat plastid 60.08 60.67
TraesCS7A01G288800.1 Wheat plastid 59.88 60.47
TraesCS7B01G185800.1 Wheat plastid 59.88 60.47
Bra022468.1-P Field mustard plasma membrane 56.59 60.46
Bra013529.1-P Field mustard plasma membrane 60.08 60.43
Bra019870.1-P Field mustard plasma membrane 61.05 60.34
Zm00001d049467_P001 Maize plasma membrane 60.08 60.31
Bra031762.1-P Field mustard plasma membrane 60.85 60.27
Os01t0567500-01 Rice plasma membrane 59.69 60.04
TraesCS3A01G475400.1 Wheat peroxisome 32.36 59.86
Os01t0567600-00 Rice plasma membrane 59.3 59.77
EES13444 Sorghum plasma membrane 60.27 59.69
OQU85892 Sorghum plasma membrane 60.27 59.46
EES03141 Sorghum golgi, plasma membrane, vacuole 58.33 59.14
Zm00001d044245_P001 Maize plasma membrane 58.33 59.14
GSMUA_Achr4P29880_001 Banana plasma membrane 55.43 58.97
HORVU3Hr1G102840.5 Barley plasma membrane 60.08 58.71
Zm00001d032409_P001 Maize plasma membrane 60.85 58.58
Zm00001d007078_P001 Maize golgi, plasma membrane, vacuole 55.23 58.16
HORVU7Hr1G069030.1 Barley plasma membrane 60.08 58.05
TraesCS5D01G001600.1 Wheat golgi, plasma membrane, vacuole 58.14 58.03
TraesCS5B01G001000.1 Wheat golgi, plasma membrane, vacuole 58.14 58.03
TraesCS5A01G001100.1 Wheat golgi, plasma membrane, vacuole 57.95 57.95
HORVU5Hr1G054140.1 Barley golgi, mitochondrion, plastid 59.11 57.87
HORVU5Hr1G000380.1 Barley golgi, plasma membrane 58.14 57.8
EER93920 Sorghum golgi, plasma membrane, vacuole 59.5 57.6
Os09t0297300-00 Rice plasma membrane 58.14 57.36
Os03t0594400-01 Rice plasma membrane 57.17 56.51
Bra036297.1-P Field mustard plasma membrane 55.04 55.91
Bra000898.1-P Field mustard plasma membrane 55.43 55.75
Bra040241.1-P Field mustard plasma membrane 53.68 54.64
Bra020794.1-P Field mustard golgi, plasma membrane, vacuole 52.71 53.97
Bra036575.1-P Field mustard peroxisome, plasma membrane, vacuole 55.43 53.76
Bra001176.1-P Field mustard golgi, plasma membrane, vacuole 52.52 53.35
Bra009892.1-P Field mustard plasma membrane 51.36 53.11
Os02t0160400-01 Rice plasma membrane 52.71 52.31
TraesCS6D01G123300.1 Wheat plasma membrane 52.91 52.2
TraesCS6B01G162200.1 Wheat plasma membrane 52.71 52.01
EES04558 Sorghum plasma membrane 52.33 51.82
HORVU6Hr1G025520.1 Barley plasma membrane 52.52 51.82
TraesCS6A01G134000.1 Wheat plasma membrane 52.52 51.82
Bra030678.1-P Field mustard plasma membrane 48.84 50.6
Bra037298.1-P Field mustard plasma membrane 48.06 50.51
Bra012948.1-P Field mustard plasma membrane 48.45 49.21
Zm00001d053846_P001 Maize plasma membrane 52.33 49.0
HORVU2Hr1G064160.1 Barley peroxisome 50.19 48.5
Bra036755.1-P Field mustard plasma membrane 49.22 45.04
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6EnsemblPlantsGene:Bra039642EnsemblPlants:Bra039642.1EnsemblPlants:Bra039642.1-PGO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0022857GO:GO:0055085InterPro:IPR020846UniProt:M4FEX0InterPro:MFS_domInterPro:MFS_sugar_transport-like
InterPro:MFS_trans_sfPFAM:PF00083PRINTS:PR00171ScanProsite:PS00216ScanProsite:PS00217PFscan:PS50850
PANTHER:PTHR23500PANTHER:PTHR23500:SF357SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879
TMHMM:TMhelixUniParc:UPI000253EA46SEG:seg:::
Description
AT1G50310 (E=8e-256) ATSTP9, STP9 | STP9 (SUGAR TRANSPORTER 9); carbohydrate transmembrane transporter/ sugar:hydrogen symporter
Coordinates
chrScaffold000172:-:129782..131975
Molecular Weight (calculated)
56117.2 Da
IEP (calculated)
7.281
GRAVY (calculated)
0.557
Length
516 amino acids
Sequence
(BLAST)
001: MAGGAFVSDG GGGGSYEGGV TGFVIITCIV AAMGGLLFGY DLGISGGVTS MEEFLSKFFP EVDRQMHNAR RETAYCKFDN QLLQLFTSSL YLAALVSSFA
101: ASVVTRKYGR KISMFVGGLA FLIGALINAF AVNVAMLIIG RLLLGVGVGF ANQSTPVYLS EMAPAKLRGA LNIGFQMAIT IGILIANLIN YGTSQMARNG
201: WRVSLGLAAV PAVVMVIGSF VLPDTPNSML ERGKYEQARE MLQKIRGADN VDEEFQDLCD ACEAAKKVEH PWKNLFLQAK YRPALAFCSA IPFFQQFTGI
301: NVIMFYAPVL FKTLGFADDA SLISAVITGV VNVVSTLVSI YAVDRYGRRI LFLEGGIQMI ICQIIVGSLI GAKFGTTGSG TLTPATADWV LAFICLYVAG
401: FAWSWGPLGW LVPSEICPLE IRPAGQAVNV SVNMFFTFLI GQFFLTMLCH MKFGLFYFFG GMVLIMTIFI YFLLPETKGV PIEEMGRVWK QHPFWKRYIP
501: DDAVIGGSEE TSVKEV
Best Arabidopsis Sequence Match ( AT1G50310.1 )
(BLAST)
001: MAGGAFVSEG GGGGNSYEGG VTVFVIMTCI VAAMGGLLFG YDLGISGGVT SMEEFLSKFF PEVDKQMHEA RRETAYCKFD NQLLQLFTSS LYLAALASSF
101: VASAVTRKYG RKISMFVGGV AFLIGSLFNA FATNVAMLIV GRLLLGVGVG FANQSTPVYL SEMAPAKIRG ALNIGFQMAI TIGILIANLI NYGTSQMAKN
201: GWRVSLGLAA VPAVIMVIGS FVLPDTPNSM LERGKYEQAR EMLQKIRGAD NVDEEFQDLC DACEAAKKVD NPWKNIFQQA KYRPALVFCS AIPFFQQITG
301: INVIMFYAPV LFKTLGFADD ASLISAVITG AVNVVSTLVS IYAVDRYGRR ILFLEGGIQM IVSQIVVGTL IGMKFGTTGS GTLTPATADW ILAFICLYVA
401: GFAWSWGPLG WLVPSEICPL EIRPAGQAIN VSVNMFFTFL IGQFFLTMLC HMKFGLFYFF GGMVAVMTVF IYFLLPETKG VPIEEMGRVW KQHPFWKRYM
501: PDDAVIGGGE ENYVKEV
Arabidopsis Description
STP9STP9 [Source:UniProtKB/TrEMBL;Acc:A0A178WN25]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.