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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • mitochondrion 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plasma membrane
iPSORT:mitochondrion
MultiLoc:plasma membrane
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G134000.1 Wheat plasma membrane 96.18 96.18
TraesCS6D01G123300.1 Wheat plasma membrane 95.79 95.79
TraesCS6B01G162200.1 Wheat plasma membrane 95.79 95.79
Os02t0160400-01 Rice plasma membrane 82.98 83.46
EES04558 Sorghum plasma membrane 77.82 78.12
Zm00001d053846_P001 Maize plasma membrane 78.01 74.05
GSMUA_Achr5P26540_001 Banana extracellular, plasma membrane, vacuole 48.76 56.92
CDY62955 Canola extracellular, plasma membrane 22.56 56.73
HORVU7Hr1G069030.1 Barley plasma membrane 56.79 55.62
GSMUA_Achr11P... Banana plasma membrane 49.9 55.18
CDY33433 Canola cytosol, peroxisome, plasma membrane 30.78 54.39
HORVU2Hr1G041080.6 Barley plasma membrane 55.07 54.24
HORVU3Hr1G102860.5 Barley plasma membrane 53.54 53.95
HORVU5Hr1G000380.1 Barley golgi, plasma membrane 53.15 53.56
KRG90624 Soybean plasma membrane 52.2 53.42
GSMUA_Achr11P... Banana golgi, plasma membrane, plastid, vacuole 44.93 53.41
AT1G50310.1 Thale cress plasma membrane 52.01 52.61
CDY02218 Canola plasma membrane 43.4 52.55
AT3G19940.1 Thale cress plasma membrane 51.63 52.53
Bra039642.1-P Field mustard golgi, plasma membrane, vacuole 51.82 52.52
CDY53930 Canola golgi, plasma membrane, vacuole 51.82 52.52
AT5G23270.1 Thale cress plasma membrane 51.43 52.33
CDY42509 Canola golgi, plasma membrane, vacuole 51.63 52.33
CDY22788 Canola golgi, plasma membrane, vacuole 51.63 52.33
Bra018841.1-P Field mustard golgi, plasma membrane, vacuole 51.63 52.33
CDY29325 Canola golgi, plasma membrane, vacuole 51.63 52.33
KRH36130 Soybean plasma membrane 50.86 52.05
HORVU5Hr1G054140.1 Barley golgi, mitochondrion, plastid 52.39 51.99
KRH40901 Soybean plasma membrane 50.48 51.56
Bra038245.1-P Field mustard plasma membrane 50.29 51.47
Bra038243.1-P Field mustard plasma membrane 50.29 51.47
CDY33432 Canola plasma membrane 50.29 51.47
Bra013029.1-P Field mustard golgi, plasma membrane, vacuole 37.09 51.46
KRH40905 Soybean plasma membrane 50.29 51.37
CDY45759 Canola plasma membrane 51.24 51.34
CDY33434 Canola plasma membrane 50.1 51.27
HORVU3Hr1G102840.5 Barley plasma membrane 51.43 50.95
PGSC0003DMT400042165 Potato peroxisome, plasma membrane, vacuole 49.14 50.79
Solyc01g008240.2.1 Tomato peroxisome, plasma membrane, vacuole 48.95 50.69
CDY66084 Canola golgi, plasma membrane, vacuole 35.56 50.41
CDY62952 Canola golgi, plasma membrane, vacuole 50.29 50.0
HORVU7Hr1G019240.1 Barley golgi, mitochondrion, plasma membrane 22.75 49.58
GSMUA_Achr10P... Banana plasma membrane 47.61 49.5
AT3G19930.1 Thale cress plasma membrane 48.37 49.22
Bra001766.1-P Field mustard plasma membrane 48.37 49.22
CDY36072 Canola plasma membrane 40.34 49.18
CDY62951 Canola plasma membrane 40.73 48.97
CDX82272 Canola plasma membrane 40.15 48.95
Bra038242.1-P Field mustard plasma membrane 47.99 48.83
CDY25359 Canola plasma membrane 39.96 48.72
CDY33431 Canola plasma membrane 39.96 48.72
CDY38688 Canola plasma membrane 39.77 48.26
CDY24593 Canola plasma membrane 39.96 47.5
Bra022468.1-P Field mustard plasma membrane 43.59 47.2
HORVU7Hr1G019280.1 Barley peroxisome, plasma membrane, vacuole 43.98 44.75
CDY68476 Canola plasma membrane 9.37 44.55
HORVU5Hr1G065630.4 Barley cytosol 44.17 44.42
CDY62956 Canola cytosol 3.44 43.9
HORVU1Hr1G056010.7 Barley peroxisome, plasma membrane, vacuole 44.17 43.75
HORVU1Hr1G075970.1 Barley peroxisome, plasma membrane 45.51 43.19
HORVU2Hr1G064160.1 Barley peroxisome 43.98 43.07
HORVU1Hr1G092330.5 Barley golgi, plasma membrane 41.87 42.94
HORVU3Hr1G018700.2 Barley golgi, mitochondrion, plasma membrane, vacuole 40.54 41.41
HORVU3Hr1G018740.2 Barley golgi, mitochondrion, plasma membrane, vacuole 40.54 41.25
HORVU5Hr1G065660.1 Barley plasma membrane 42.06 40.97
HORVU5Hr1G055850.2 Barley plasma membrane 41.49 40.94
HORVU2Hr1G079620.3 Barley golgi, plasma membrane 39.2 40.59
HORVU2Hr1G079690.3 Barley peroxisome, plasma membrane, vacuole 38.43 38.88
HORVU6Hr1G084290.24 Barley golgi, plasma membrane 41.3 38.57
HORVU2Hr1G079790.7 Barley golgi 36.52 37.09
HORVU1Hr1G013480.4 Barley plasma membrane 36.9 36.83
HORVU4Hr1G084740.3 Barley golgi, plasma membrane 36.33 36.82
HORVU2Hr1G079700.3 Barley cytosol, peroxisome 38.24 35.27
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6UniProt:A0A287TMW8GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
EnsemblPlantsGene:HORVU6Hr1G025520EnsemblPlants:HORVU6Hr1G025520.1InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sf
PFAM:PF00083PRINTS:PR00171ScanProsite:PS00216ScanProsite:PS00217PFscan:PS50850PANTHER:PTHR23500
PANTHER:PTHR23500:SF178SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879TMHMM:TMhelix
UniParc:UPI000B48243ASEG:seg::::
Description
No Description!
Coordinates
chrchr6H:-:92725971..92728217
Molecular Weight (calculated)
57142.3 Da
IEP (calculated)
8.518
GRAVY (calculated)
0.599
Length
523 amino acids
Sequence
(BLAST)
001: MPGAVIVHHH NRYKTYPGEV TGFVFYSCLV ASVGGCIFGY DIGLTAGLTS TESFLLLFFP DIYQQQKNQV ITNQYCKFDS QELSFFGSSL FLSAAAASLF
101: ASPMARAFGR KWTLFYAAVA YIIGACMGGV ATTFAMLITG RLLLGVGVGL CIHASPLYLS EMAPAQQRGM LNILFQLMIT IGILSASLTN YWTSKFIGGW
201: GWRVGLAMGA VPGSIIALGS LAIPDTPISL LSRGETELAR ATLSQIRGIG PDDVRQEFDD LAAACEESKA VANPWRELLF TGKYKPQLTF ALGVPFFQQL
301: TGINVIMFYA PVLFKTVGFR SDASLVSSVI TGLVNVFSTF VAVVTADKVG RRALFLQGGT QMIISQILVG TFIGLQFGLS GTGAISEQYA MCIVLFVCVY
401: VAGFAWSWGP MGWLIPSEVY PLAVRSQAQS ITVAVNMCFT AFIGQVFLAL LCHLRFGLFY FFGAWLLLMT IFIAVLLPET KSVPLEEVAH VFRKHWFWRK
501: YVIDTSADAR GAEMRKRIAL EMS
Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)
001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV
Arabidopsis Description
STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.