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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:mitochondrion, peroxisome
iPSORT:mitochondrion
MultiLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G282400.1 Wheat plasma membrane 70.41 72.73
TraesCS2D01G264200.1 Wheat plasma membrane 70.22 72.53
TraesCS2A01G259500.1 Wheat plasma membrane 70.22 72.53
Os07t0106200-02 Rice plasma membrane 64.79 66.8
CDY68476 Canola plasma membrane 13.3 64.55
Zm00001d018627_P001 Maize plasma membrane 61.05 62.33
EER97830 Sorghum plasma membrane 60.49 62.12
HORVU3Hr1G102860.5 Barley plasma membrane 59.18 60.89
GSMUA_Achr9P24550_001 Banana golgi, plasma membrane, vacuole 58.99 60.58
GSMUA_Achr2P14120_001 Banana plasma membrane 58.8 60.15
GSMUA_Achr8P03770_001 Banana golgi, plasma membrane, vacuole 53.56 58.85
HORVU3Hr1G102840.5 Barley plasma membrane 57.87 58.52
HORVU2Hr1G041080.6 Barley plasma membrane 57.87 58.19
GSMUA_Achr9P02830_001 Banana plasma membrane 52.43 57.97
CDY66084 Canola golgi, plasma membrane, vacuole 38.95 56.37
HORVU5Hr1G054140.1 Barley golgi, mitochondrion, plastid 53.93 54.65
Bra013029.1-P Field mustard golgi, plasma membrane, vacuole 38.02 53.85
HORVU7Hr1G069030.1 Barley plasma membrane 53.37 53.37
KRH40901 Soybean plasma membrane 48.88 50.98
Bra022468.1-P Field mustard plasma membrane 46.07 50.93
KRG90624 Soybean plasma membrane 48.69 50.88
KRH40905 Soybean plasma membrane 48.69 50.78
PGSC0003DMT400042165 Potato peroxisome, plasma membrane, vacuole 47.94 50.59
CDY29325 Canola golgi, plasma membrane, vacuole 48.69 50.39
CDY62951 Canola plasma membrane 41.01 50.34
Solyc01g008240.2.1 Tomato peroxisome, plasma membrane, vacuole 47.57 50.3
AT3G19930.1 Thale cress plasma membrane 48.31 50.19
Bra039642.1-P Field mustard golgi, plasma membrane, vacuole 48.5 50.19
CDX82272 Canola plasma membrane 40.26 50.12
CDY25359 Canola plasma membrane 40.26 50.12
AT1G50310.1 Thale cress plasma membrane 48.5 50.1
CDY53930 Canola golgi, plasma membrane, vacuole 48.31 50.0
Bra001766.1-P Field mustard plasma membrane 48.13 50.0
CDY36072 Canola plasma membrane 40.07 49.88
HORVU5Hr1G000380.1 Barley golgi, plasma membrane 48.31 49.71
CDY33431 Canola plasma membrane 39.89 49.65
KRH36130 Soybean plasma membrane 47.38 49.51
CDY38688 Canola plasma membrane 39.89 49.42
Bra038242.1-P Field mustard plasma membrane 47.57 49.42
CDY42509 Canola golgi, plasma membrane, vacuole 47.57 49.22
Bra018841.1-P Field mustard golgi, plasma membrane, vacuole 47.57 49.22
CDY22788 Canola golgi, plasma membrane, vacuole 47.57 49.22
CDY24593 Canola plasma membrane 40.45 49.09
CDY62956 Canola cytosol 3.75 48.78
AT3G19940.1 Thale cress plasma membrane 46.63 48.44
CDY33432 Canola plasma membrane 46.07 48.14
Bra038245.1-P Field mustard plasma membrane 46.07 48.14
Bra038243.1-P Field mustard plasma membrane 46.07 48.14
CDY33434 Canola plasma membrane 45.88 47.95
AT5G23270.1 Thale cress plasma membrane 45.69 47.47
CDY62952 Canola golgi, plasma membrane, vacuole 46.07 46.77
CDY45759 Canola plasma membrane 44.76 45.79
CDY02218 Canola plasma membrane 36.52 45.14
HORVU5Hr1G065630.4 Barley cytosol 43.26 44.42
HORVU6Hr1G025520.1 Barley plasma membrane 43.07 43.98
CDY33433 Canola cytosol, peroxisome, plasma membrane 24.34 43.92
HORVU7Hr1G019280.1 Barley peroxisome, plasma membrane, vacuole 40.45 42.02
HORVU1Hr1G056010.7 Barley peroxisome, plasma membrane, vacuole 41.2 41.67
HORVU5Hr1G065660.1 Barley plasma membrane 40.64 40.41
HORVU1Hr1G075970.1 Barley peroxisome, plasma membrane 40.82 39.56
HORVU7Hr1G019240.1 Barley golgi, mitochondrion, plasma membrane 17.6 39.17
HORVU2Hr1G079620.3 Barley golgi, plasma membrane 36.89 39.01
CDY62955 Canola extracellular, plasma membrane 15.17 38.94
HORVU5Hr1G055850.2 Barley plasma membrane 38.58 38.87
HORVU6Hr1G084290.24 Barley golgi, plasma membrane 40.64 38.75
HORVU3Hr1G018700.2 Barley golgi, mitochondrion, plasma membrane, vacuole 36.89 38.48
HORVU3Hr1G018740.2 Barley golgi, mitochondrion, plasma membrane, vacuole 36.89 38.33
HORVU1Hr1G092330.5 Barley golgi, plasma membrane 36.14 37.84
HORVU2Hr1G079690.3 Barley peroxisome, plasma membrane, vacuole 35.39 36.56
HORVU2Hr1G079790.7 Barley golgi 34.46 35.73
HORVU1Hr1G013480.4 Barley plasma membrane 34.46 35.11
HORVU4Hr1G084740.3 Barley golgi, plasma membrane 33.9 35.08
HORVU2Hr1G079700.3 Barley cytosol, peroxisome 36.89 34.74
Protein Annotations
Gene3D:1.20.1250.20MapMan:35.1UniProt:A0A287I7V6GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
EnsemblPlantsGene:HORVU2Hr1G064160EnsemblPlants:HORVU2Hr1G064160.1InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sf
PFAM:PF00083PRINTS:PR00171ScanProsite:PS00216PFscan:PS50850PANTHER:PTHR23500PANTHER:PTHR23500:SF336
SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTMHMM:TMhelixUniParc:UPI000B4821FASEG:seg
Description
No Description!
Coordinates
chrchr2H:+:434999519..435003569
Molecular Weight (calculated)
57620.9 Da
IEP (calculated)
10.574
GRAVY (calculated)
0.165
Length
534 amino acids
Sequence
(BLAST)
001: MAGGAVVNTS GGKDYPGRLT LFVFFTCVVA ATGGLIFGYD IGISGGVTSM NPFLKKFFPE VYHRKQMKDS ANQYCKYDNQ LLQTFTSSLY LAALVSSFFA
101: ATVTRAVGRK WSMFTGGLTF LIGAALNGAA ENIAMLIVGR ILLGVGVGFA NQSVPVYLSE MAPXXXXXXX XRISLALAAV PAGIITLGSL FLPDTPNSLI
201: ERGHPEAARR MLNRIRGNDV DISEEYADLV VASEESKLVQ HPWRNILQRK YRPQLTMAIM IPFFQQLTGI NVIMFYAPVL FETLGFKGDA SLMSAVITGL
301: VNVFATLVSV FTVDRLGRRK LFLQGGTQML LSQLVVGTLI AVKFGTSGVG EMPKGYAAAV VLFICLYVAG FAWGAGAQRD LPAGDQAGGA EHQRLRQHAL
401: HLRHRAGIPH HALPHEVRPL LLLRRLGGDH DRLHRALPAG DQERAHRGDG ARMEGTLVLA QVHRRRRRPR RRKQWQGRRH RIDSHSLPAL LPPSCTLIAL
501: LLSFFDACLV CPRTRCLGQT VCFRLCSKIN SCIN
Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)
001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV
Arabidopsis Description
STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.