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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • mitochondrion 1
  • golgi 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:golgi, mitochondrion, plasma membrane
iPSORT:mitochondrion
MultiLoc:golgi
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G515200.1 Wheat plasma membrane 97.87 98.06
TraesCS4D01G341400.1 Wheat plasma membrane 97.67 97.86
TraesCS4B01G346400.1 Wheat plasma membrane 96.32 96.13
Os04t0452600-00 Rice endoplasmic reticulum, plasma membrane, vacuole 68.8 74.27
HORVU2Hr1G079620.3 Barley golgi, plasma membrane 67.44 68.91
GSMUA_Achr3P06440_001 Banana golgi, plasma membrane, vacuole 60.47 61.3
GSMUA_Achr3P06460_001 Banana peroxisome, plasma membrane, vacuole 57.56 59.4
HORVU2Hr1G079790.7 Barley golgi 55.23 55.34
VIT_18s0001g05570.t01 Wine grape plasma membrane 51.36 53.0
PGSC0003DMT400016373 Potato plasma membrane 50.78 50.97
KRH62357 Soybean plasma membrane 49.22 50.1
HORVU2Hr1G079690.3 Barley peroxisome, plasma membrane, vacuole 50.0 49.9
Solyc04g074070.1.1 Tomato plasma membrane 48.84 49.51
AT1G34580.1 Thale cress cytosol, golgi, plasma membrane 48.45 49.41
HORVU1Hr1G013480.4 Barley plasma membrane 50.0 49.24
KRH16713 Soybean plasma membrane 48.26 49.02
CDY66862 Canola plasma membrane 48.06 49.01
KRH62356 Soybean plasma membrane 48.26 48.92
HORVU5Hr1G054140.1 Barley golgi, mitochondrion, plastid 49.61 48.58
KRH53073 Soybean plasma membrane 47.87 48.53
CDX91766 Canola golgi, plasma membrane, vacuole 47.29 48.41
KRH18902 Soybean plasma membrane 46.9 48.21
HORVU2Hr1G079700.3 Barley cytosol, peroxisome 52.91 48.15
KRH16714 Soybean plasma membrane 47.09 47.93
KRH62355 Soybean plasma membrane 47.09 47.83
HORVU2Hr1G041080.6 Barley plasma membrane 47.67 46.33
HORVU3Hr1G102860.5 Barley plasma membrane 46.12 45.86
HORVU5Hr1G000380.1 Barley golgi, plasma membrane 45.35 45.09
HORVU5Hr1G065630.4 Barley cytosol 45.35 45.0
HORVU7Hr1G069030.1 Barley plasma membrane 46.51 44.94
HORVU3Hr1G018700.2 Barley golgi, mitochondrion, plasma membrane, vacuole 44.38 44.73
HORVU3Hr1G018740.2 Barley golgi, mitochondrion, plasma membrane, vacuole 44.38 44.55
HORVU3Hr1G102840.5 Barley plasma membrane 45.35 44.32
HORVU5Hr1G055850.2 Barley plasma membrane 45.35 44.15
Bra036755.1-P Field mustard plasma membrane 47.87 43.79
HORVU7Hr1G019280.1 Barley peroxisome, plasma membrane, vacuole 43.6 43.77
HORVU1Hr1G056010.7 Barley peroxisome, plasma membrane, vacuole 44.57 43.56
HORVU1Hr1G092330.5 Barley golgi, plasma membrane 43.02 43.53
HORVU5Hr1G065660.1 Barley plasma membrane 44.77 43.02
HORVU6Hr1G084290.24 Barley golgi, plasma membrane 43.02 39.64
HORVU1Hr1G075970.1 Barley peroxisome, plasma membrane 40.7 38.11
HORVU7Hr1G019240.1 Barley golgi, mitochondrion, plasma membrane 17.64 37.92
HORVU6Hr1G025520.1 Barley plasma membrane 36.82 36.33
HORVU2Hr1G064160.1 Barley peroxisome 35.08 33.9
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6UniProt:A0A287PXT1GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
EnsemblPlantsGene:HORVU4Hr1G084740EnsemblPlants:HORVU4Hr1G084740.3InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sf
PFAM:PF00083PRINTS:PR00171ScanProsite:PS00217PFscan:PS50850PANTHER:PTHR23500PANTHER:PTHR23500:SF92
SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879TMHMM:TMhelixUniParc:UPI000B46794D
SEG:seg:::::
Description
No Description!
Coordinates
chrchr4H:-:629614514..629616330
Molecular Weight (calculated)
55021.1 Da
IEP (calculated)
10.509
GRAVY (calculated)
0.605
Length
516 amino acids
Sequence
(BLAST)
001: AKAMAAGAVE SGHGSPLAYG GELTFTVVIT CLVAASGGLI FGYDIGISGG VSQMKPFLQA FFPKVLRRMA DAKRSQYCIF DSHALTSFTS SLYIAGLVSS
101: FAAGRVTRSL GRRGVMLLGG ALFFAGGAMT GAAMNLAMLI VGRMLLGFGV GFTNQATPLY LAEMAPARWR GSLGVAFQFF LALGILIANL VNYGTARLEW
201: GWRLSLGLAG APAIVIFVGA LFLTDTPSSF IMRGKADLAR SALLRVRGAS ANVDAELKDI TRAVEASRSS EEGAFRKLFA DRQYRPHLTF SVVVPLCHQL
301: SGMMVLTFFS PLVFRIAGFG SNAALMGAVI LAAVKFGSLI LSTLVIDRYG RKVLVMVGAV IMVVCQVANA WIMGAQAANG PIPRAYGVAL LVLTCVQGAG
401: FGMSWAPLIW IIPGEIFPME IRSAGQSVSV STTLGLTFLQ TQTFLALLCR LKYATFAYYA AWVVALTAFV LVFLPETKGV PLESMGSVWE RHWYWKRFVG
501: DGHGRRKPAS SPSAST
Best Arabidopsis Sequence Match ( AT1G34580.1 )
(BLAST)
001: MAGGGLALDV SSAGNIDAKI TAAVVMSCIV AASCGLIFGY DIGISGGVTT MKPFLEKFFP SVLKKASEAK TNVYCVYDSQ LLTAFTSSLY VAGLVASLVA
101: SRLTAAYGRR TTMILGGFTF LFGALINGLA ANIAMLISGR ILLGFGVGFT NQAAPVYLSE VAPPRWRGAF NIGFSCFISM GVVAANLINY GTDSHRNGWR
201: ISLGLAAVPA AIMTVGCLFI SDTPSSLLAR GKHDEAHTSL LKLRGVENIA DVETELAELV RSSQLAIEAR AELFMKTILQ RRYRPHLVVA VVIPCFQQLT
301: GITVNAFYAP VLFRSVGFGS GPALIATFIL GFVNLGSLLL STMVIDRFGR RFLFIAGGIL MLLCQIAVAV LLAVTVGATG DGEMKKGYAV TVVVLLCIYA
401: AGFGWSWGPL SWLVPSEIFP LKIRPAGQSL SVAVNFAATF ALSQTFLATL CDFKYGAFLF YGGWIFTMTI FVIMFLPETK GIPVDSMYQV WEKHWYWQRF
501: TKPTST
Arabidopsis Description
STP5Sugar transport protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q93Y91]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.