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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • golgi 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, plasma membrane, plastid
iPSORT:plastid
MultiLoc:golgi
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G064900.1 Wheat plasma membrane 93.7 93.52
Os02t0573500-01 Rice plasma membrane 81.3 80.83
Zm00001d050860_P001 Maize plasma membrane 80.34 80.81
OQU85192 Sorghum peroxisome, plasma membrane, vacuole 75.19 80.74
GSMUA_Achr3P06440_001 Banana golgi, plasma membrane, vacuole 55.73 57.37
GSMUA_Achr3P06460_001 Banana peroxisome, plasma membrane, vacuole 51.15 53.6
HORVU2Hr1G079620.3 Barley golgi, plasma membrane 50.76 52.67
HORVU2Hr1G079690.3 Barley peroxisome, plasma membrane, vacuole 51.91 52.61
HORVU2Hr1G079790.7 Barley golgi 50.57 51.46
VIT_18s0001g05570.t01 Wine grape plasma membrane 48.28 50.6
HORVU4Hr1G084740.3 Barley golgi, plasma membrane 49.24 50.0
AT1G34580.1 Thale cress cytosol, golgi, plasma membrane 46.95 48.62
KRH53073 Soybean plasma membrane 47.14 48.53
PGSC0003DMT400016373 Potato plasma membrane 46.95 47.86
KRH62355 Soybean plasma membrane 46.37 47.83
CDY66862 Canola plasma membrane 46.18 47.83
Solyc04g074070.1.1 Tomato plasma membrane 46.37 47.74
KRH62357 Soybean plasma membrane 45.99 47.53
CDX91766 Canola golgi, plasma membrane, vacuole 45.42 47.22
KRH62356 Soybean plasma membrane 45.8 47.15
KRH16713 Soybean plasma membrane 45.23 46.65
HORVU5Hr1G065630.4 Barley cytosol 46.18 46.54
HORVU5Hr1G054140.1 Barley golgi, mitochondrion, plastid 46.76 46.49
HORVU5Hr1G000380.1 Barley golgi, plasma membrane 45.61 46.05
HORVU3Hr1G102860.5 Barley plasma membrane 45.61 46.05
KRH16714 Soybean plasma membrane 44.27 45.76
HORVU2Hr1G079700.3 Barley cytosol, peroxisome 49.43 45.68
HORVU3Hr1G102840.5 Barley plasma membrane 45.8 45.45
KRH18902 Soybean plasma membrane 43.51 45.42
HORVU2Hr1G041080.6 Barley plasma membrane 45.99 45.39
HORVU3Hr1G018700.2 Barley golgi, mitochondrion, plasma membrane, vacuole 44.08 45.12
HORVU7Hr1G019240.1 Barley golgi, mitochondrion, plasma membrane 20.61 45.0
HORVU3Hr1G018740.2 Barley golgi, mitochondrion, plasma membrane, vacuole 44.08 44.94
HORVU7Hr1G019280.1 Barley peroxisome, plasma membrane, vacuole 43.51 44.36
HORVU7Hr1G069030.1 Barley plasma membrane 44.27 43.45
Bra036755.1-P Field mustard plasma membrane 46.37 43.09
HORVU1Hr1G092330.5 Barley golgi, plasma membrane 41.22 42.35
HORVU5Hr1G065660.1 Barley plasma membrane 42.75 41.71
HORVU1Hr1G056010.7 Barley peroxisome, plasma membrane, vacuole 40.84 40.53
HORVU5Hr1G055850.2 Barley plasma membrane 39.5 39.06
HORVU6Hr1G084290.24 Barley golgi, plasma membrane 40.27 37.68
HORVU1Hr1G075970.1 Barley peroxisome, plasma membrane 38.93 37.02
HORVU6Hr1G025520.1 Barley plasma membrane 36.83 36.9
HORVU2Hr1G064160.1 Barley peroxisome 35.11 34.46
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6UniProt:A0A287ENX3GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
EnsemblPlantsGene:HORVU1Hr1G013480EnsemblPlants:HORVU1Hr1G013480.4InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sf
PFAM:PF00083PRINTS:PR00171ScanProsite:PS00216PFscan:PS50850PANTHER:PTHR23500PANTHER:PTHR23500:SF126
SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879TMHMM:TMhelixUniParc:UPI000B477656
SEG:seg:::::
Description
No Description!
Coordinates
chrchr1H:-:35679745..35683428
Molecular Weight (calculated)
56599.8 Da
IEP (calculated)
8.798
GRAVY (calculated)
0.603
Length
524 amino acids
Sequence
(BLAST)
001: MPGGGGALVV DAAGAAASGY SSEITFTVVM SCLMAASGGL IFGYDISITG GLTQMTSFLE AFFPEIIEKI NNTQQDAYCI FDSQVLTTFV SSLYLAGVFA
101: CLVAGHVTRK VGRRNSMLIG ASFFLVGAVL NCAAVNIYML VIGRIFLGFA VGFTNQQSAP VYLAEIAPAR WRGAFTSIFH FFLNVGMFVA DLVNYRANTI
201: PGWGWRLSLG VGIIPAVVIL VGAVFIPDSP NSLVLRGKVE EARHSLRRIR GPAADVDMEL KDIMRAAEEG GRHKSGAFRR IMLREYRPHL VMAIAIPLFF
301: ELTGMIVVTL FAPLLFYTIG FTSQKAILGS IITDVVSLAS ISVAAFSVDR FGRRFLFKLG GGVLLACLVG MTWIFGAELG TDGGKAMPRP YAVAVVALAC
401: LFVAGFGVSW GPLKWIIPSE IFPLEVRSAG QSMSESISLT LTFVQTQSFL AMLCSFKYGS FAYNAGWVVV MTAFIIAFLP ETKGVPIEAM GAVWARHWYW
501: KRFVKPAPAP EPTPDKQTDG SLEM
Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)
001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV
Arabidopsis Description
STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.