CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, plasma membrane

Predictor Summary:

nucleus 1
plastid 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plasma membrane, vacuole
Any Predictor:	nucleus, peroxisome, plasma membrane, plastid, vacuole
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050860_P001	Maize	plasma membrane	91.6	85.8
HORVU1Hr1G013480.4	Barley	plasma membrane	80.74	75.19
Os02t0573500-01	Rice	plasma membrane	81.15	75.14
TraesCS1A01G064900.1	Wheat	plasma membrane	79.1	73.52
GSMUA_Achr3P06440_001	Banana	golgi, plasma membrane, vacuole	55.33	53.05
EES10921	Sorghum	peroxisome, plasma membrane, vacuole	54.3	51.66
GSMUA_Achr3P06460_001	Banana	peroxisome, plasma membrane, vacuole	52.25	51.0
OQU81689	Sorghum	extracellular, plasma membrane, vacuole	53.07	50.78
KXG26442	Sorghum	peroxisome	54.71	49.26
EES10920	Sorghum	plasma membrane	52.25	48.94
EES10919	Sorghum	peroxisome, plasma membrane, vacuole	51.23	48.92
EES11734	Sorghum	plasma membrane	50.2	47.48
KXG25760	Sorghum	plasma membrane	48.77	46.58
VIT_18s0001g05570.t01	Wine grape	plasma membrane	46.72	45.6
KRH62357	Soybean	plasma membrane	46.52	44.77
OQU85892	Sorghum	plasma membrane	47.54	44.36
PGSC0003DMT400016373	Potato	plasma membrane	46.31	43.97
AT1G34580.1	Thale cress	cytosol, golgi, plasma membrane	45.29	43.68
KRH53073	Soybean	plasma membrane	45.29	43.42
EER97830	Sorghum	plasma membrane	45.9	43.08
Solyc04g074070.1.1	Tomato	plasma membrane	44.88	43.03
KRH16714	Soybean	plasma membrane	44.67	43.0
KRH16713	Soybean	plasma membrane	44.67	42.91
CDY66862	Canola	plasma membrane	44.26	42.69
KRH62356	Soybean	plasma membrane	44.47	42.63
EES03141	Sorghum	golgi, plasma membrane, vacuole	44.47	42.63
KRH62355	Soybean	plasma membrane	44.26	42.52
EER99540	Sorghum	golgi, plasma membrane, vacuole	46.11	42.37
KRH18902	Soybean	plasma membrane	43.24	42.03
CDX91766	Canola	golgi, plasma membrane, vacuole	43.24	41.87
EES13444	Sorghum	plasma membrane	44.26	41.46
EER89165	Sorghum	cytosol, peroxisome, plasma membrane	43.24	40.5
EER96733	Sorghum	mitochondrion, plasma membrane	42.83	40.35
OQU89290	Sorghum	golgi, peroxisome, plasma membrane	31.15	40.11
EER93920	Sorghum	golgi, plasma membrane, vacuole	43.24	39.59
KXG40430	Sorghum	plasma membrane	43.44	39.41
EER92634	Sorghum	plasma membrane	41.39	39.07
KXG28819	Sorghum	golgi, plasma membrane, vacuole	41.8	38.93
Bra036755.1-P	Field mustard	plasma membrane	44.06	38.12
EES18290	Sorghum	plasma membrane	36.48	37.08
OQU92134	Sorghum	peroxisome, plasma membrane, vacuole	39.75	36.88
EER98187	Sorghum	plasma membrane	38.11	36.33
EES04558	Sorghum	plasma membrane	36.68	34.36

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	UniProt:A0A1Z5RN62	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	EnsemblPlants:OQU85192	ProteinID:OQU85192
ProteinID:OQU85192.1	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217	PFscan:PS50850
PANTHER:PTHR23500	PANTHER:PTHR23500:SF126	EnsemblPlantsGene:SORBI_3004G188701	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS
TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI000B8B9671	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:+:54068646..54073433

Molecular Weight (calculated)

53125.1 Da

IEP (calculated)

8.703

GRAVY (calculated)

0.460

Length

488 amino acids

Sequence
(BLAST)

001: MHGGGGGGDG YSSEITFTVV RSCLMAASGG LIFGYDISIT GGLTQMESFL KAFFPDILEK MNNATQDEYC IFDSQLLTTF VSSLYLAGMF ACLVAGHITR
101: KIGRRNSMLI GASLFFVGSV LNCTAVNVAM LVIGRVLLGF AVGFTNQSAP VYLAEIAPTR CRGAFTSIFH LFLNVGMFAA DLVNYRANTI AVWGWRLSLG
201: VGIVPATVIL VGAAFIPDSP NSLVLRGKPD AARASLQRIR GGRSAGVDVE LKDIMQAAEE DRRHESGAFR RIVRREYRPH LVMAIAIPVF FELTGMIVVT
301: LFTPLLFYTI GFTSQKAILG SIITDVVSLA SIAAAAAAVD RVGRRSLFMV GGAVLLACLV AMAWIFGAEP GTDDGEKAIP TPWRWWRCEI YPLEVRSAGQ
401: GMSEAISLAL TFVQTQSFLN MLCSFKYGAF AYNAGWVVVM TTFIFFFLPE TKGVPIESLR EVWARHWYWK RFVKPPPSAP KVVDGPEV

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.