CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
golgi 1
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89165	Sorghum	cytosol, peroxisome, plasma membrane	66.46	61.23
CDY23062	Canola	golgi, plasma membrane, vacuole	49.79	55.97
CDY02138	Canola	golgi, plasma membrane, vacuole	49.58	55.74
GSMUA_Achr6P36920_001	Banana	plasma membrane	52.29	54.45
KXG28819	Sorghum	golgi, plasma membrane, vacuole	58.12	53.24
Bra012948.1-P	Field mustard	plasma membrane	53.96	50.98
AT5G61520.1	Thale cress	plasma membrane	54.58	50.97
OQU85892	Sorghum	plasma membrane	51.04	46.85
EES13444	Sorghum	plasma membrane	50.62	46.64
OQU92134	Sorghum	peroxisome, plasma membrane, vacuole	50.83	46.39
KXG40430	Sorghum	plasma membrane	51.46	45.91
EER97830	Sorghum	plasma membrane	49.58	45.77
EES03141	Sorghum	golgi, plasma membrane, vacuole	47.71	44.99
EER96733	Sorghum	mitochondrion, plasma membrane	48.33	44.79
EER99540	Sorghum	golgi, plasma membrane, vacuole	48.96	44.26
EES10921	Sorghum	peroxisome, plasma membrane, vacuole	46.04	43.08
EER98187	Sorghum	plasma membrane	45.62	42.77
EER93920	Sorghum	golgi, plasma membrane, vacuole	47.29	42.59
EER92634	Sorghum	plasma membrane	45.62	42.36
OQU81689	Sorghum	extracellular, plasma membrane, vacuole	42.92	40.39
OQU89290	Sorghum	golgi, peroxisome, plasma membrane	31.88	40.37
KXG26442	Sorghum	peroxisome	44.38	39.3
EES04558	Sorghum	plasma membrane	42.5	39.16
EES10919	Sorghum	peroxisome, plasma membrane, vacuole	41.25	38.75
EES10920	Sorghum	plasma membrane	41.04	37.81
EES11734	Sorghum	plasma membrane	39.38	36.63
OQU85192	Sorghum	peroxisome, plasma membrane, vacuole	37.08	36.48
KXG25760	Sorghum	plasma membrane	38.75	36.4

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	UniProt:C5YYP0	EnsemblPlants:EES18290	ProteinID:EES18290	ProteinID:EES18290.2
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0022891	GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom
InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217
PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF30	EnsemblPlantsGene:SORBI_3009G152800	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt
InterPro:Sugar_transporter_CS	TMHMM:TMhelix	UniParc:UPI00081ADAC3	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:-:50914823..50926418

Molecular Weight (calculated)

51532.8 Da

IEP (calculated)

8.571

GRAVY (calculated)

0.420

Length

480 amino acids

Sequence
(BLAST)

001: MALGGATPER QEPPRRYSGR ITAFVVLSCV AAGMGGVIFG YDIGVSGGVS SMDAFLERFF PEVYRRMKGG GGERVSNYCR FDSQLLTAFT SSLYVAGLVS
101: TFFASSVTAR CGRRPSMIVA GVVIIAGAAI GGSAVHISML ILSRVLLGVG LGFGNQAVPL YLSEMAPPSR RGAFSNGFQL CVGLGSLAAQ LTPNSLVQQG
201: RDRDQVRDLL RKIRGGTDRD NKWVEDEVDD MVAVAARSSS SSKLVMAVMI PFFQQVTGIN AIAFYAPELL RTVGVGESAA LLAVVAKQTV GVGATLASMF
301: AVDRFGRRTL FLAGGLQMLV SQVLIGGIMA SQLGDDDGNG EVSKACAVAL IALIAVYQAG FGWSWGPLGW LVPNEIFPLE VRSAGQSIAV AVNFLLTTAV
401: AQSFLAVLCH LNAGIFFFFA AWLVIMTVFV YLFLPETKGL PIEQVDRLWA HHWFWNKFVE TNHQRTEEQS ILVERKIQTA

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.