CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

nucleus 1
mitochondrion 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	golgi, mitochondrion, nucleus, plasma membrane, vacuole
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032906_P001	Maize	plasma membrane	92.18	95.08
TraesCS3B01G120300.1	Wheat	plasma membrane	65.46	74.4
TraesCS3A01G102800.1	Wheat	golgi, mitochondrion, plasma membrane, vacuole	72.14	74.12
TraesCS3D01G105000.1	Wheat	golgi, plasma membrane, vacuole	72.33	74.02
HORVU3Hr1G018700.2	Barley	golgi, mitochondrion, plasma membrane, vacuole	71.76	73.44
HORVU3Hr1G018740.2	Barley	golgi, mitochondrion, plasma membrane, vacuole	71.76	73.15
TraesCS1B01G454800.1	Wheat	golgi, plasma membrane, vacuole	69.47	72.22
HORVU1Hr1G092330.5	Barley	golgi, plasma membrane	68.51	70.39
Os11t0594000-01	Rice	cytosol, mitochondrion, plasma membrane, vacuole	69.85	70.11
EER89165	Sorghum	cytosol, peroxisome, plasma membrane	66.79	67.18
GSMUA_Achr6P36920_001	Banana	plasma membrane	54.77	62.26
EES18290	Sorghum	plasma membrane	53.24	58.12
KXG40430	Sorghum	plasma membrane	56.68	55.2
CDY23062	Canola	golgi, plasma membrane, vacuole	44.27	54.33
Bra012948.1-P	Field mustard	plasma membrane	52.29	53.94
CDY02138	Canola	golgi, plasma membrane, vacuole	43.89	53.86
OQU85892	Sorghum	plasma membrane	53.24	53.35
AT5G61520.1	Thale cress	plasma membrane	51.72	52.72
OQU92134	Sorghum	peroxisome, plasma membrane, vacuole	52.29	52.09
EES13444	Sorghum	plasma membrane	51.34	51.63
EER96733	Sorghum	mitochondrion, plasma membrane	50.76	51.35
EER97830	Sorghum	plasma membrane	50.57	50.96
EES03141	Sorghum	golgi, plasma membrane, vacuole	49.24	50.69
EER99540	Sorghum	golgi, plasma membrane, vacuole	50.95	50.28
OQU89290	Sorghum	golgi, peroxisome, plasma membrane	35.31	48.81
EER93920	Sorghum	golgi, plasma membrane, vacuole	49.05	48.22
EER98187	Sorghum	plasma membrane	46.76	47.85
EER92634	Sorghum	plasma membrane	46.56	47.2
EES10921	Sorghum	peroxisome, plasma membrane, vacuole	45.42	46.39
EES10919	Sorghum	peroxisome, plasma membrane, vacuole	43.89	45.01
KXG26442	Sorghum	peroxisome	45.61	44.1
OQU81689	Sorghum	extracellular, plasma membrane, vacuole	41.98	43.14
EES10920	Sorghum	plasma membrane	42.75	42.99
OQU85192	Sorghum	peroxisome, plasma membrane, vacuole	38.93	41.8
EES04558	Sorghum	plasma membrane	41.22	41.46
EES11734	Sorghum	plasma membrane	38.93	39.53
KXG25760	Sorghum	plasma membrane	38.55	39.53

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	UniProt:A0A1B6PT23	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0022891
GO:GO:0055085	InterPro:IPR020846	EnsemblPlants:KXG28819	ProteinID:KXG28819	ProteinID:KXG28819.1	InterPro:MFS_dom
InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00217	PFscan:PS50850
PANTHER:PTHR23500	PANTHER:PTHR23500:SF127	EnsemblPlantsGene:SORBI_3005G171200	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS
TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI00081ADD69	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:+:65094249..65096355

Molecular Weight (calculated)

56060.8 Da

IEP (calculated)

9.596

GRAVY (calculated)

0.509

Length

524 amino acids

Sequence
(BLAST)

001: MAVGLVDPGG SDGRQYGGRI TKFVALSCVT AAMGGAIFGY DLGTSGGVSS MGSFLEEFFP DVYRRMKGDV RVSNYCKFDS QLLTLFTSSL YIAGLLTAML
101: LSSWFTARRG RRPSMIIGGA AFLAGAAVSG GAVNVYMAIL GRALLGVGLG FANQAVLLYL SEMAPARYRG AFSNGFQLSL CLGSLAANII NYGAEKITGG
201: WGWRLSLGLA GVPAALFTLG AVFLPETPNS LVQQGEDRGR VRALLQKIRG TDDAAAVDAE LDDIVAANST AARGGGGRGD SGLRLILSRP RYRPQLAIAV
301: LMPAFTQLNG INAIGFYAPV LLRTVGMGES LALLSTVVTV VIYTASTVVF MFVIDRFGRR TLLIAGSIQM LVSEVMIGAV MAAKLGDEGG MPRGYAAALF
401: VLIGVYVAGY SWSWGPMTWL VPSEVFPLEI RSAGQSITVA SGFVFTIFIA QGFLAMLCRM RAWLFFFFAG WIVVMTAFVY MFLPETKGMP IEQIGKVWRE
501: HWFWGRVVGS SEELQATHKV SDNL

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.