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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d018627_P001 Maize plasma membrane 95.19 94.65
Os07t0106200-02 Rice plasma membrane 87.5 87.84
TraesCS2A01G259500.1 Wheat plasma membrane 85.0 85.49
TraesCS2D01G264200.1 Wheat plasma membrane 85.0 85.49
TraesCS2B01G282400.1 Wheat plasma membrane 84.62 85.11
GSMUA_Achr2P14120_001 Banana plasma membrane 82.69 82.38
TraesCS3D01G470200.1 Wheat plasma membrane 80.96 81.91
TraesCS3B01G518900.1 Wheat plasma membrane 80.96 81.91
HORVU3Hr1G102860.5 Barley plasma membrane 81.15 81.31
GSMUA_Achr9P02830_001 Banana plasma membrane 75.19 80.95
TraesCS3B01G518800.1 Wheat plasma membrane 78.08 79.92
GSMUA_Achr9P24550_001 Banana golgi, plasma membrane, vacuole 79.81 79.81
TraesCS3D01G470300.1 Wheat plasma membrane 77.88 79.72
TraesCS3A01G475200.1 Wheat plasma membrane 77.88 79.72
TraesCS3A01G475400.1 Wheat peroxisome 42.31 78.85
GSMUA_Achr8P03770_001 Banana golgi, plasma membrane, vacuole 72.88 77.98
HORVU3Hr1G102840.5 Barley plasma membrane 77.88 76.7
EER99540 Sorghum golgi, plasma membrane, vacuole 78.27 76.65
OQU85892 Sorghum plasma membrane 70.38 69.98
CDY62955 Canola extracellular, plasma membrane 27.5 68.75
EES13444 Sorghum plasma membrane 68.85 68.71
CDY29325 Canola golgi, plasma membrane, vacuole 66.35 66.86
CDY53930 Canola golgi, plasma membrane, vacuole 66.35 66.86
Bra039642.1-P Field mustard golgi, plasma membrane, vacuole 66.35 66.86
KRH40901 Soybean plasma membrane 65.58 66.6
KRH40905 Soybean plasma membrane 65.38 66.41
CDY68476 Canola plasma membrane 14.04 66.36
CDY22788 Canola golgi, plasma membrane, vacuole 65.77 66.28
CDY42509 Canola golgi, plasma membrane, vacuole 65.77 66.28
Bra018841.1-P Field mustard golgi, plasma membrane, vacuole 65.77 66.28
EES03141 Sorghum golgi, plasma membrane, vacuole 64.62 66.01
AT1G50310.1 Thale cress plasma membrane 65.58 65.96
AT3G19940.1 Thale cress plasma membrane 65.19 65.95
KRG90624 Soybean plasma membrane 64.81 65.95
PGSC0003DMT400042165 Potato peroxisome, plasma membrane, vacuole 64.04 65.81
CDY33432 Canola plasma membrane 64.62 65.75
Solyc01g008240.2.1 Tomato peroxisome, plasma membrane, vacuole 63.85 65.74
CDY33434 Canola plasma membrane 64.42 65.56
Bra038245.1-P Field mustard plasma membrane 64.42 65.56
Bra038243.1-P Field mustard plasma membrane 64.42 65.56
EER93920 Sorghum golgi, plasma membrane, vacuole 67.12 65.48
CDY33433 Canola cytosol, peroxisome, plasma membrane 37.12 65.2
KRH36130 Soybean plasma membrane 63.85 64.97
AT5G23270.1 Thale cress plasma membrane 63.85 64.59
CDY66084 Canola golgi, plasma membrane, vacuole 45.58 64.23
AT3G19930.1 Thale cress plasma membrane 63.27 64.01
CDY62951 Canola plasma membrane 53.08 63.45
Bra001766.1-P Field mustard plasma membrane 62.69 63.42
CDY62952 Canola golgi, plasma membrane, vacuole 64.04 63.31
CDY33431 Canola plasma membrane 52.12 63.17
CDY25359 Canola plasma membrane 51.92 62.94
CDY36072 Canola plasma membrane 51.92 62.94
Bra038242.1-P Field mustard plasma membrane 62.12 62.84
CDY02218 Canola plasma membrane 52.12 62.73
CDX82272 Canola plasma membrane 51.73 62.7
CDY38688 Canola plasma membrane 51.92 62.65
CDY45759 Canola plasma membrane 62.69 62.45
EER96733 Sorghum mitochondrion, plasma membrane 61.54 61.78
CDY24593 Canola plasma membrane 52.12 61.59
Bra013029.1-P Field mustard golgi, plasma membrane, vacuole 44.42 61.27
Bra022468.1-P Field mustard plasma membrane 56.54 60.87
HORVU2Hr1G064160.1 Barley peroxisome 62.12 60.49
CDY62956 Canola cytosol 4.62 58.54
EER92634 Sorghum plasma membrane 57.88 58.22
EES04558 Sorghum plasma membrane 55.96 55.85
EER89165 Sorghum cytosol, peroxisome, plasma membrane 54.62 54.51
EER98187 Sorghum plasma membrane 51.92 52.73
KXG40430 Sorghum plasma membrane 54.42 52.6
OQU89290 Sorghum golgi, peroxisome, plasma membrane 38.27 52.51
EES10921 Sorghum peroxisome, plasma membrane, vacuole 51.15 51.85
KXG28819 Sorghum golgi, plasma membrane, vacuole 50.96 50.57
OQU92134 Sorghum peroxisome, plasma membrane, vacuole 50.96 50.38
EES18290 Sorghum plasma membrane 45.77 49.58
KXG26442 Sorghum peroxisome 50.96 48.89
OQU81689 Sorghum extracellular, plasma membrane, vacuole 47.31 48.24
EES10920 Sorghum plasma membrane 46.92 46.83
EES10919 Sorghum peroxisome, plasma membrane, vacuole 45.19 45.99
OQU85192 Sorghum peroxisome, plasma membrane, vacuole 43.08 45.9
EES11734 Sorghum plasma membrane 43.65 43.99
KXG25760 Sorghum plasma membrane 43.08 43.84
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6UniProt:C5X761EnsemblPlants:EER97830ProteinID:EER97830ProteinID:EER97830.2
GO:GO:0003674GO:GO:0005215GO:GO:0005351GO:GO:0005355GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0015992GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0035428
GO:GO:0046323GO:GO:0055085GO:GO:1902600GO:GO:1904659InterPro:IPR020846InterPro:MFS_dom
InterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PRINTS:PR00171ScanProsite:PS00216ScanProsite:PS00217
PFscan:PS50850PANTHER:PTHR23500PANTHER:PTHR23500:SF336EnsemblPlantsGene:SORBI_3002G004900SUPFAM:SSF103473unigene:Sbi.18751
InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879TMHMM:TMhelixUniParc:UPI0009DC92A8RefSeq:XP_002461309.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr2:-:521396..526917
Molecular Weight (calculated)
56895.3 Da
IEP (calculated)
9.485
GRAVY (calculated)
0.503
Length
520 amino acids
Sequence
(BLAST)
001: MAGGAIVNTG GGKDYPGKLT LFVLLTCIVA ATGGLIFGYD IGISGGVTSM DPFLEKFFPE VFRKKQEAKT NQYCKYDNQL LQTFTSSLYL AALVASFFAA
101: TVTRVLGRKW SMLVGGLTFL VGAALNGAAQ NVAMLIIGRI LLGVGVGFAN QSVPVYLSEM APARLRGMLN IGFQLMITIG ILAAELINYG TNKIKAGYGW
201: RVSLALAAVP AAIITLGSLF LPDTPNSLLE RGHPEEARRM LRRIRGTEDI GEEYADLVAA SEEARQVQHP WRNIVRRRYR AQLTMAVMIP FFQQLTGINV
301: IMFYAPVLFE TLGFKNDASL MSSVITGLVN VFATVVSIVT VDRVGRRKLF LQGGAQMIVC QLVVGTLIAA KFGTSGTGDI ARGYAAVVVV FICAYVAGFA
401: WSWGPLGWLV PSEIFPLEIR PAGQSINVSV NMFFTFCIAQ AFLTMLCHFK FGLFYFFAGW VVIMTVFIAL FLPETKNVPI EEMVLVWKSH WFWKKFIADD
501: DVHVGGNHLQ MDKNVKGADA
Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)
001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV
Arabidopsis Description
STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.