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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • mitochondrion 1
  • golgi 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, mitochondrion, plasma membrane
iPSORT:mitochondrion
MultiLoc:golgi
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G470200.1 Wheat plasma membrane 96.34 97.28
TraesCS3B01G518900.1 Wheat plasma membrane 95.95 96.89
TraesCS3A01G475400.1 Wheat peroxisome 51.45 95.7
HORVU3Hr1G102840.5 Barley plasma membrane 86.51 85.04
Os07t0106200-02 Rice plasma membrane 81.12 81.27
EER97830 Sorghum plasma membrane 81.31 81.15
Zm00001d018627_P001 Maize plasma membrane 80.73 80.11
GSMUA_Achr2P14120_001 Banana plasma membrane 76.49 76.05
GSMUA_Achr9P02830_001 Banana plasma membrane 70.13 75.36
GSMUA_Achr9P24550_001 Banana golgi, plasma membrane, vacuole 74.95 74.81
GSMUA_Achr8P03770_001 Banana golgi, plasma membrane, vacuole 68.79 73.46
HORVU2Hr1G041080.6 Barley plasma membrane 73.8 72.13
HORVU5Hr1G054140.1 Barley golgi, mitochondrion, plastid 66.86 65.84
HORVU7Hr1G069030.1 Barley plasma membrane 66.67 64.79
CDY68476 Canola plasma membrane 13.68 64.55
Bra039642.1-P Field mustard golgi, plasma membrane, vacuole 62.62 62.98
CDY29325 Canola golgi, plasma membrane, vacuole 62.62 62.98
CDY53930 Canola golgi, plasma membrane, vacuole 62.62 62.98
AT1G50310.1 Thale cress plasma membrane 62.62 62.86
Solyc01g008240.2.1 Tomato peroxisome, plasma membrane, vacuole 61.08 62.77
AT3G19930.1 Thale cress plasma membrane 62.04 62.65
KRG90624 Soybean plasma membrane 61.66 62.62
HORVU5Hr1G000380.1 Barley golgi, plasma membrane 62.62 62.62
Bra001766.1-P Field mustard plasma membrane 61.66 62.26
PGSC0003DMT400042165 Potato peroxisome, plasma membrane, vacuole 60.69 62.25
CDY62955 Canola extracellular, plasma membrane 24.86 62.02
Bra018841.1-P Field mustard golgi, plasma membrane, vacuole 61.66 62.02
CDY42509 Canola golgi, plasma membrane, vacuole 61.66 62.02
CDY22788 Canola golgi, plasma membrane, vacuole 61.66 62.02
CDY33431 Canola plasma membrane 51.25 62.0
CDY62951 Canola plasma membrane 51.83 61.84
CDY36072 Canola plasma membrane 51.06 61.77
CDX82272 Canola plasma membrane 51.06 61.77
CDY25359 Canola plasma membrane 51.06 61.77
Bra038242.1-P Field mustard plasma membrane 61.08 61.67
AT3G19940.1 Thale cress plasma membrane 61.08 61.67
KRH36130 Soybean plasma membrane 60.69 61.64
CDY38688 Canola plasma membrane 51.06 61.48
AT5G23270.1 Thale cress plasma membrane 60.89 61.48
CDY33432 Canola plasma membrane 60.5 61.45
Bra038245.1-P Field mustard plasma membrane 60.31 61.25
Bra038243.1-P Field mustard plasma membrane 60.31 61.25
CDY33434 Canola plasma membrane 60.31 61.25
KRH40901 Soybean plasma membrane 60.31 61.13
KRH40905 Soybean plasma membrane 60.12 60.94
CDY66084 Canola golgi, plasma membrane, vacuole 42.97 60.43
CDY24593 Canola plasma membrane 50.87 60.0
Bra022468.1-P Field mustard plasma membrane 55.68 59.83
HORVU2Hr1G064160.1 Barley peroxisome 60.89 59.18
CDY62952 Canola golgi, plasma membrane, vacuole 59.92 59.13
CDY45759 Canola plasma membrane 59.15 58.81
CDY02218 Canola plasma membrane 48.94 58.8
CDY33433 Canola cytosol, peroxisome, plasma membrane 33.53 58.78
HORVU5Hr1G065630.4 Barley cytosol 58.38 58.27
Bra013029.1-P Field mustard golgi, plasma membrane, vacuole 41.81 57.56
HORVU7Hr1G019280.1 Barley peroxisome, plasma membrane, vacuole 54.14 54.67
HORVU7Hr1G019240.1 Barley golgi, mitochondrion, plasma membrane 25.24 54.58
HORVU6Hr1G025520.1 Barley plasma membrane 53.95 53.54
HORVU5Hr1G065660.1 Barley plasma membrane 54.72 52.89
HORVU1Hr1G056010.7 Barley peroxisome, plasma membrane, vacuole 53.37 52.46
HORVU1Hr1G092330.5 Barley golgi, plasma membrane 48.94 49.8
HORVU5Hr1G055850.2 Barley plasma membrane 50.67 49.62
HORVU3Hr1G018700.2 Barley golgi, mitochondrion, plasma membrane, vacuole 48.55 49.22
HORVU3Hr1G018740.2 Barley golgi, mitochondrion, plasma membrane, vacuole 48.55 49.03
HORVU6Hr1G084290.24 Barley golgi, plasma membrane 52.79 48.93
HORVU1Hr1G075970.1 Barley peroxisome, plasma membrane 51.45 48.46
HORVU2Hr1G079620.3 Barley golgi, plasma membrane 47.01 48.32
HORVU2Hr1G079790.7 Barley golgi 46.63 46.99
HORVU2Hr1G079690.3 Barley peroxisome, plasma membrane, vacuole 46.63 46.81
CDY62956 Canola cytosol 3.66 46.34
HORVU4Hr1G084740.3 Barley golgi, plasma membrane 45.86 46.12
HORVU1Hr1G013480.4 Barley plasma membrane 46.05 45.61
HORVU2Hr1G079700.3 Barley cytosol, peroxisome 46.82 42.86
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6UniProt:A0A287MI97GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
EnsemblPlantsGene:HORVU3Hr1G102860EnsemblPlants:HORVU3Hr1G102860.5InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sf
PFAM:PF00083PRINTS:PR00171ScanProsite:PS00216ScanProsite:PS00217PFscan:PS50850PANTHER:PTHR23500
PANTHER:PTHR23500:SF336SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879TMHMM:TMhelix
UniParc:UPI000B4785F2SEG:seg::::
Description
No Description!
Coordinates
chrchr3H:+:665065700..665071566
Molecular Weight (calculated)
56363.6 Da
IEP (calculated)
9.690
GRAVY (calculated)
0.555
Length
519 amino acids
Sequence
(BLAST)
001: MAGGAFVDTA GGKQYPGKLT LYVVFTCVVA STGGLIFGYD IGISGGVTSM DPFLLKFFPE VYRQKQAASK SNQYCQYDNQ LLQAFTSSLY LAALVASFFA
101: STVTRVLGRK WSMLAGGFTF LVGAALNGAA QNVAMLIVGR MLLGVGIGFA NQSVPVYLSE MAPAHLRGML NIGFQLMITI GILAAELINY GTNKIKGGHG
201: WRVSLALAAV PAVIITVGAL FLPDTPNSLM ERGHPEASRR MLRRIRGTDD IGEEYADLVA AREISKQVQH PWRNILMRKY RAQLTMAVLI PFFQQVSGIN
301: VINFYAPVLF ETLGFRGDAS LLSSVMTGGV LVLGSVVSMF TVDRLGRRKL FLQGGAQMLV SQIAVGTLIA VRFGTSGVGE MPRGYAAAVV LFICVYVAGF
401: VWSWGALGWL VPSEIFPLEI RSAGQSITVS VNMFFTFVIA QAFLTMLCHM KFGLFYFFAG WVVVMTTFVA FFLPETKNVP MEEMVLVWKG HWFWSRFIGD
501: ADDIHAGVSV IGKSGAAVD
Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)
001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV
Arabidopsis Description
STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.