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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • plastid 1
  • golgi 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:golgi, plasma membrane, plastid
iPSORT:plastid
MultiLoc:golgi
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G384700.1 Wheat plasma membrane 81.79 87.24
TraesCS6A01G351600.1 Wheat cytosol, peroxisome, plasma membrane 55.89 87.19
EER92634 Sorghum plasma membrane 68.75 74.47
Zm00001d028230_P001 Maize plasma membrane 68.21 74.32
GSMUA_Achr4P03620_001 Banana plasma membrane 61.07 70.23
GSMUA_Achr7P27070_001 Banana plasma membrane 59.64 69.58
KRH77866 Soybean peroxisome, plasma membrane, vacuole 63.93 68.58
KRH27626 Soybean peroxisome, plasma membrane, vacuole 63.75 68.39
PGSC0003DMT400081426 Potato mitochondrion 62.68 67.11
Solyc09g075820.2.1 Tomato nucleus 62.32 66.73
KRH35542 Soybean plasma membrane 56.25 66.32
KRG91268 Soybean plasma membrane 59.29 64.84
AT5G26340.1 Thale cress plasma membrane 60.89 64.83
VIT_05s0020g03140.t01 Wine grape plasma membrane 61.79 64.55
Bra036575.1-P Field mustard peroxisome, plasma membrane, vacuole 61.07 64.29
CDY19773 Canola plasma membrane 61.07 64.29
CDX87052 Canola peroxisome, plasma membrane, vacuole 60.89 64.1
CDY67102 Canola cytosol, plasma membrane, vacuole 57.32 63.82
KRH35541 Soybean peroxisome, plasma membrane, vacuole 56.79 63.6
CDX80558 Canola plasma membrane 57.32 63.31
HORVU3Hr1G102860.5 Barley plasma membrane 48.93 52.79
HORVU5Hr1G065630.4 Barley cytosol 48.93 52.69
HORVU5Hr1G000380.1 Barley golgi, plasma membrane 47.5 51.25
HORVU2Hr1G041080.6 Barley plasma membrane 48.57 51.22
HORVU1Hr1G075970.1 Barley peroxisome, plasma membrane 50.0 50.82
HORVU3Hr1G102840.5 Barley plasma membrane 47.86 50.76
HORVU5Hr1G054140.1 Barley golgi, mitochondrion, plastid 47.32 50.28
HORVU7Hr1G069030.1 Barley plasma membrane 45.54 47.75
HORVU5Hr1G065660.1 Barley plasma membrane 45.71 47.67
HORVU7Hr1G019240.1 Barley golgi, mitochondrion, plasma membrane 19.82 46.25
HORVU5Hr1G055850.2 Barley plasma membrane 43.75 46.23
HORVU7Hr1G019280.1 Barley peroxisome, plasma membrane, vacuole 42.14 45.91
HORVU3Hr1G018700.2 Barley golgi, mitochondrion, plasma membrane, vacuole 41.43 45.31
HORVU3Hr1G018740.2 Barley golgi, mitochondrion, plasma membrane, vacuole 41.43 45.14
HORVU2Hr1G079620.3 Barley golgi, plasma membrane 40.54 44.95
HORVU1Hr1G092330.5 Barley golgi, plasma membrane 40.54 44.51
HORVU1Hr1G056010.7 Barley peroxisome, plasma membrane, vacuole 41.43 43.94
HORVU4Hr1G084740.3 Barley golgi, plasma membrane 39.64 43.02
HORVU2Hr1G079790.7 Barley golgi 38.57 41.94
HORVU6Hr1G025520.1 Barley plasma membrane 38.57 41.3
HORVU2Hr1G079690.3 Barley peroxisome, plasma membrane, vacuole 38.04 41.2
HORVU2Hr1G064160.1 Barley peroxisome 38.75 40.64
HORVU1Hr1G013480.4 Barley plasma membrane 37.68 40.27
HORVU2Hr1G079700.3 Barley cytosol, peroxisome 38.93 38.45
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6UniProt:A0A287UZH5GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0035428
GO:GO:0055085GO:GO:1904659EnsemblPlantsGene:HORVU6Hr1G084290EnsemblPlants:HORVU6Hr1G084290.24InterPro:IPR020846InterPro:MFS_dom
InterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PRINTS:PR00171PFscan:PS50850PANTHER:PTHR23500
PANTHER:PTHR23500:SF70SUPFAM:SSF103473InterPro:Sugar/inositol_transptTMHMM:TMhelixUniParc:UPI000B46E837SEG:seg
Description
No Description!
Coordinates
chrchr6H:+:553915923..553918821
Molecular Weight (calculated)
62703.1 Da
IEP (calculated)
9.225
GRAVY (calculated)
0.346
Length
560 amino acids
Sequence
(BLAST)
001: RAKMPAGGFP ASSALLSGME FEAKITPMVI TTCVTAATGG LMFGYDIGIS GGVSSMEDFQ REFFPTVLHK RRENKRSNYC RYDNQGLQLF TSSLYLAALV
101: STLFASYTTR RRGRRATMRI AGAFFIVGAI FNGAARNLGM LIVGRILLGC GVGFANQAIP LFLSEVAPTT IRGGLNSLFQ LNITIGILFA SLVNYGTNKY
201: LLVERQPCFA YFSTINITGV HAYTHTNNRF LTSCRIHPWG WRLSLFLAGF PAVLFTLGTL FMVDTPNSLI ERGRQEEGKV VLKKIRGTDN VDPEFNEILE
301: ASRIAHDIKR PFHNLLQRCN RPLLMITILI QMFQQLSGIN AIMFYAPVLL TTLGFKTEAS LYSAVITGAV NVLSTFVSMY TVDRVGRQML LLDGGVQMLL
401: SLVAMAVVMR TKVTDRSDDL DHDWAIMVVV IICNFVSSFA WSWGPLGWLI PSEIFPLETR SVGQSISVCT NMLFTFVFAQ VFLSMLCHLK SFIFVFSSVC
501: VAIMSLFVIF FLPETNNIPM EEMAERVWKQ HWFWKRFMND GGDNHDVTRE RTPSIMSLFS
Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)
001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV
Arabidopsis Description
STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.