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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY67102 Canola cytosol, plasma membrane, vacuole 94.67 95.43
AT5G26340.1 Thale cress plasma membrane 87.77 84.6
CDY19773 Canola plasma membrane 88.76 84.59
CDX87052 Canola peroxisome, plasma membrane, vacuole 88.56 84.4
KRH77866 Soybean peroxisome, plasma membrane, vacuole 79.29 77.01
KRH27626 Soybean peroxisome, plasma membrane, vacuole 78.5 76.25
Os03t0218400-01 Rice plasma membrane 77.12 75.92
Solyc09g075820.2.1 Tomato nucleus 78.3 75.91
Zm00001d028230_P001 Maize plasma membrane 76.92 75.88
VIT_05s0020g03140.t01 Wine grape plasma membrane 80.08 75.75
PGSC0003DMT400081426 Potato mitochondrion 78.11 75.72
TraesCS4B01G243500.1 Wheat plasma membrane 76.73 75.68
TraesCS4D01G243100.1 Wheat plasma membrane 76.73 75.68
EER92634 Sorghum plasma membrane 76.73 75.24
TraesCS4A01G066200.1 Wheat plasma membrane 76.13 74.95
GSMUA_Achr7P27070_001 Banana plasma membrane 70.41 74.38
GSMUA_Achr4P03620_001 Banana plasma membrane 71.01 73.92
KRH35542 Soybean plasma membrane 67.06 71.58
KRG91268 Soybean plasma membrane 71.01 70.31
KRH35541 Soybean peroxisome, plasma membrane, vacuole 68.84 69.8
TraesCS6B01G384700.1 Wheat plasma membrane 66.86 64.57
TraesCS6A01G351600.1 Wheat cytosol, peroxisome, plasma membrane 44.97 63.51
CDY07098 Canola plasma membrane 58.19 58.07
CDY27726 Canola golgi, plasma membrane, vacuole 57.2 57.54
CDY22024 Canola plasma membrane 57.59 57.48
CDY05216 Canola plasma membrane 57.0 57.34
HORVU6Hr1G084290.24 Barley golgi, plasma membrane 63.31 57.32
CDX88227 Canola plasma membrane 56.21 57.11
CDX90958 Canola plasma membrane 57.59 56.92
CDY52634 Canola plasma membrane 56.21 56.89
CDY49992 Canola golgi, plasma membrane, vacuole 56.61 56.5
CDY18836 Canola plasma membrane 56.21 56.21
CDX74116 Canola plasma membrane 56.21 56.1
CDY62955 Canola extracellular, plasma membrane 22.49 54.81
CDX82827 Canola golgi, plasma membrane, vacuole 55.03 54.39
CDX79066 Canola plasma membrane 54.64 54.0
CDX97945 Canola plasma membrane 55.42 53.83
CDY34842 Canola plasma membrane 55.03 53.55
CDY19352 Canola plasma membrane 54.83 53.26
CDY66084 Canola golgi, plasma membrane, vacuole 38.46 52.85
CDY68476 Canola plasma membrane 11.44 52.73
CDY29325 Canola golgi, plasma membrane, vacuole 53.65 52.71
CDY53930 Canola golgi, plasma membrane, vacuole 53.65 52.71
CDY26777 Canola plasma membrane 47.73 52.61
CDY47467 Canola plasma membrane 50.3 51.93
CDY02218 Canola plasma membrane 44.18 51.85
CDX87534 Canola plasma membrane 49.11 51.77
CDY45759 Canola plasma membrane 53.25 51.72
CDY33433 Canola cytosol, peroxisome, plasma membrane 30.18 51.69
CDY33432 Canola plasma membrane 52.07 51.66
CDY33434 Canola plasma membrane 52.07 51.66
CDY42509 Canola golgi, plasma membrane, vacuole 52.47 51.55
CDY22788 Canola golgi, plasma membrane, vacuole 52.47 51.55
CDX82272 Canola plasma membrane 42.8 50.58
CDY25359 Canola plasma membrane 42.6 50.35
CDX86492 Canola plasma membrane 49.31 50.2
CDY33431 Canola plasma membrane 42.41 50.12
CDY36072 Canola plasma membrane 42.41 50.12
CDY62951 Canola plasma membrane 43.0 50.11
CDX88350 Canola plasma membrane 50.49 50.1
CDY62952 Canola golgi, plasma membrane, vacuole 51.87 50.0
CDY34655 Canola plasma membrane 54.83 49.91
CDY06700 Canola plasma membrane 49.11 49.9
CDY15608 Canola plasma membrane 48.92 49.8
CDY38688 Canola plasma membrane 42.21 49.65
CDY10269 Canola plasma membrane 48.72 49.5
CDY24593 Canola plasma membrane 42.6 49.09
CDY66862 Canola plasma membrane 48.13 48.22
CDX91766 Canola golgi, plasma membrane, vacuole 47.34 47.62
CDY23062 Canola golgi, plasma membrane, vacuole 39.05 46.37
CDY62956 Canola cytosol 3.75 46.34
CDY02138 Canola golgi, plasma membrane, vacuole 38.66 45.9
CDX91815 Canola plasma membrane 57.2 34.52
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6GO:A0A078CZP8EnsemblPlants:CDX80558ProteinID:CDX80558ProteinID:CDX80558.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00133676001InterPro:IPR020846InterPro:MFS_dom
InterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PRINTS:PR00171ScanProsite:PS00216PFscan:PS50850
PANTHER:PTHR23500PANTHER:PTHR23500:SF70SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879
TMHMM:TMhelixUniParc:UPI0004EB88ACSEG:seg:::
Description
BnaC07g28860D
Coordinates
chrLK031821:-:1341351..1344629
Molecular Weight (calculated)
55711.0 Da
IEP (calculated)
9.525
GRAVY (calculated)
0.552
Length
507 amino acids
Sequence
(BLAST)
001: MAAGFSTASA KGVDFEAKIT PIVIISSIIA ATGGLMFGYE VGVSGGVTAM PEFLKKFFPV VYGRVEVGAD KNNYYCKYDK QGLQIFTSSL YLAGLTATFF
101: ASYTTRTLGR RPTMLIAGVF YIIGVVLNAA AQDLAMLITG RILLGCGVGF ANQAVPLFLS EIAPTRIRGG LNTLFQLNVT IGILFANLVN YGTAKIKGEW
201: GWRLSLGLAG IPALLLTVGA LLVTDTPNSL VERGRLNEGK AVLRQIRGTV NVEPEFADLL EASSLAKEVK HPFRNLLQRR NRPHVALQIF QQCTGINAIM
301: FYAPVLFSTL GFGSDASLYS AVLTGAVNVP STLVSIYLVD KVGRRVLLLE AGLQMFFSQL VIAIVLGIKV TDHSNNLSKG FAVLVVVMIC TYVAAFAWSW
401: GPLGWLIPSE VFPLETRSAG QSVTVCVNLL FTFIIAQAFL LMLCHFKFGI FIFFSSWVLV MTLFVMFLLP ETKNIPIEEM RERVWKKHWF WTRFMVMGDQ
501: SCNRQEE
Best Arabidopsis Sequence Match ( AT5G26340.1 )
(BLAST)
001: MTGGGFATSA NGVEFEAKIT PIVIISCIMA ATGGLMFGYD VGVSGGVTSM PDFLEKFFPV VYRKVVAGAD KDSNYCKYDN QGLQLFTSSL YLAGLTATFF
101: ASYTTRTLGR RLTMLIAGVF FIIGVALNAG AQDLAMLIAG RILLGCGVGF ANQAVPLFLS EIAPTRIRGG LNILFQLNVT IGILFANLVN YGTAKIKGGW
201: GWRLSLGLAG IPALLLTVGA LLVTETPNSL VERGRLDEGK AVLRRIRGTD NVEPEFADLL EASRLAKEVK HPFRNLLQRR NRPQLVIAVA LQIFQQCTGI
301: NAIMFYAPVL FSTLGFGSDA SLYSAVVTGA VNVLSTLVSI YSVDKVGRRV LLLEAGVQMF FSQVVIAIIL GVKVTDTSTN LSKGFAILVV VMICTYVAAF
401: AWSWGPLGWL IPSETFPLET RSAGQSVTVC VNLLFTFIIA QAFLSMLCHF KFGIFIFFSA WVLIMSVFVM FLLPETKNIP IEEMTERVWK KHWFWARFMD
501: DHNDHEFVNG EKSNGKSNGF DPSTRL
Arabidopsis Description
STP13STP13 [Source:UniProtKB/TrEMBL;Acc:A0A178UHA7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.