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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • peroxisome 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:peroxisome, plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra030678.1-P Field mustard plasma membrane 99.8 99.8
CDX86492 Canola plasma membrane 99.2 99.2
CDY10269 Canola plasma membrane 89.56 89.38
CDY06700 Canola plasma membrane 89.36 89.18
AT1G07340.1 Thale cress plasma membrane 84.14 84.14
CDX88227 Canola plasma membrane 57.63 57.52
CDY52634 Canola plasma membrane 57.43 57.09
CDY05216 Canola plasma membrane 55.62 54.96
CDY27726 Canola golgi, plasma membrane, vacuole 55.42 54.76
CDY18836 Canola plasma membrane 55.62 54.64
GSMUA_Achr9P11150_001 Banana plasma membrane 55.82 54.62
CDX74116 Canola plasma membrane 55.62 54.53
CDY49992 Canola golgi, plasma membrane, vacuole 55.42 54.33
CDY62956 Canola cytosol 4.42 53.66
TraesCS1A01G341100.1 Wheat plasma membrane 54.42 53.03
GSMUA_Achr11P... Banana plasma membrane 54.02 52.95
TraesCS1D01G343200.1 Wheat plasma membrane 54.02 52.64
TraesCS1B01G353800.1 Wheat plasma membrane 53.82 52.45
EER98187 Sorghum plasma membrane 53.82 52.34
CDY68476 Canola plasma membrane 11.24 50.91
Zm00001d019138_P001 Maize plasma membrane 51.81 50.29
CDY67102 Canola cytosol, plasma membrane, vacuole 50.2 49.7
CDY66084 Canola golgi, plasma membrane, vacuole 36.75 49.59
CDY33434 Canola plasma membrane 50.8 49.51
CDY33432 Canola plasma membrane 50.8 49.51
CDY02218 Canola plasma membrane 42.77 49.31
CDY53930 Canola golgi, plasma membrane, vacuole 50.8 49.03
CDY22788 Canola golgi, plasma membrane, vacuole 50.8 49.03
CDY42509 Canola golgi, plasma membrane, vacuole 50.8 49.03
CDX79066 Canola plasma membrane 50.4 48.93
CDX80558 Canola plasma membrane 49.8 48.92
CDY45759 Canola plasma membrane 51.2 48.85
CDY33433 Canola cytosol, peroxisome, plasma membrane 28.92 48.65
CDY29325 Canola golgi, plasma membrane, vacuole 50.4 48.64
CDX82827 Canola golgi, plasma membrane, vacuole 50.0 48.54
HORVU1Hr1G075970.1 Barley peroxisome, plasma membrane 53.61 48.46
CDY19773 Canola plasma membrane 51.61 48.31
CDY22024 Canola plasma membrane 49.2 48.23
CDX87052 Canola peroxisome, plasma membrane, vacuole 51.41 48.12
CDY62952 Canola golgi, plasma membrane, vacuole 50.8 48.1
CDY62955 Canola extracellular, plasma membrane 20.08 48.08
CDY07098 Canola plasma membrane 49.0 48.03
CDX90958 Canola plasma membrane 49.4 47.95
GSMUA_Achr11P... Banana plasma membrane 52.01 47.52
CDY36072 Canola plasma membrane 40.56 47.09
CDY34842 Canola plasma membrane 49.2 47.02
CDX82272 Canola plasma membrane 40.36 46.85
CDX97945 Canola plasma membrane 48.8 46.55
CDY19352 Canola plasma membrane 48.8 46.55
CDY25359 Canola plasma membrane 39.96 46.39
CDY33431 Canola plasma membrane 39.76 46.15
CDY62951 Canola plasma membrane 40.16 45.98
CDY38688 Canola plasma membrane 39.76 45.94
CDY24593 Canola plasma membrane 39.96 45.23
CDY23062 Canola golgi, plasma membrane, vacuole 38.15 44.5
CDY26777 Canola plasma membrane 40.76 44.13
CDY02138 Canola golgi, plasma membrane, vacuole 37.55 43.79
CDY34655 Canola plasma membrane 48.8 43.63
CDY47467 Canola plasma membrane 42.97 43.58
CDX87534 Canola plasma membrane 41.97 43.45
CDY66862 Canola plasma membrane 43.37 42.69
CDX91766 Canola golgi, plasma membrane, vacuole 43.17 42.66
CDX88350 Canola plasma membrane 43.37 42.27
CDX91815 Canola plasma membrane 49.4 29.29
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6GO:A0A078FTI4UniProt:A0A078FTI4EnsemblPlants:CDY15608ProteinID:CDY15608
ProteinID:CDY15608.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00089794001InterPro:IPR020846
InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PRINTS:PR00171ScanProsite:PS00216
PFscan:PS50850PANTHER:PTHR23500PANTHER:PTHR23500:SF91SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CS
TIGRFAMs:TIGR00879TMHMM:TMhelixUniParc:UPI0004EE5EAESEG:seg::
Description
BnaA08g28920DBnaA08g28920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FTI4]
Coordinates
chrLK032055:+:703345..705615
Molecular Weight (calculated)
55422.8 Da
IEP (calculated)
9.459
GRAVY (calculated)
0.509
Length
498 amino acids
Sequence
(BLAST)
001: MVTGVMNIEE GASLPAKNTF QVFMCSIIAA VGGLMFGYDI GISGGVTSMD TFLIKFFHHV YEKKHRVHEN NYCKFDDQLL QLFTSSLYLA GIFASLAASY
101: LSRRFGRKPI IMSASAFFLC GAILNFFAQE LGMLIGGRIL LGCGIGFGNQ TVPLFISEIA PARIRGGLNL MFQFLITIGI LAASYVNFLT STVKDGWRFS
201: LGGAAVPALI LLIGSFFIHE TPASLIERGK DEEGKRVLRK IRGLEDIELE FNEIKRATEI SNKVKSPFKE LFTKSENRPP LVCGTLLQFF QQFTGINVVM
301: FYAPVLFQTM GSGNNASLIS TVVTNGVNAV ATIIAVVMVD RLGRKFFLVE GATQMTATQI SIGALLLKHL HLIGPITSRS VPLIVLILIC IYVSGFAWSW
401: GPLGWLVPSE IYPLEVRNAG YFCAVAMNMV CTFVIGQFFL SALCRFRSAL FFFFAVMNVI MGLFVIFFLP ETKGVPIEDM AEQRWKKHWH WRKYFKQN
Best Arabidopsis Sequence Match ( AT1G07340.1 )
(BLAST)
001: MAVGSMNVEE GTKAFPAKLT GQVFLCCVIA AVGGLMFGYD IGISGGVTSM DTFLLDFFPH VYEKKHRVHE NNYCKFDDQL LQLFTSSLYL AGIFASFISS
101: YVSRAFGRKP TIMLASIFFL VGAILNLSAQ ELGMLIGGRI LLGFGIGFGN QTVPLFISEI APARYRGGLN VMFQFLITIG ILAASYVNYL TSTLKNGWRY
201: SLGGAAVPAL ILLIGSFFIH ETPASLIERG KDEKGKQVLR KIRGIEDIEL EFNEIKYATE VATKVKSPFK ELFTKSENRP PLVCGTLLQF FQQFTGINVV
301: MFYAPVLFQT MGSGDNASLI STVVTNGVNA IATVISLLVV DFAGRRCLLM EGALQMTATQ MTIGGILLAH LKLVGPITGH AVPLIVLILI CVYVSGFAWS
401: WGPLGWLVPS EIYPLEVRNA GYFCAVAMNM VCTFIIGQFF LSALCRFRSL LFFFFGIMNI IMGLFVVFFL PETKGVPIEE MAEKRWKTHP RWKKYFKD
Arabidopsis Description
STP2STP2 [Source:UniProtKB/TrEMBL;Acc:A0A178W5X1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.