CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, nucleus, plasma membrane
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031762.1-P	Field mustard	plasma membrane	99.62	99.62
CDX97945	Canola	plasma membrane	98.27	98.08
CDY19352	Canola	plasma membrane	98.08	97.89
AT1G11260.1	Thale cress	plasma membrane	97.12	96.93
CDY34655	Canola	plasma membrane	98.46	92.1
VIT_00s0181g00010.t01	Wine grape	plasma membrane	82.73	83.04
KRH49937	Soybean	endoplasmic reticulum	80.81	81.27
KRH41938	Soybean	mitochondrion, nucleus	79.65	79.96
CDX82827	Canola	golgi, plasma membrane, vacuole	78.5	79.73
CDX79066	Canola	plasma membrane	78.31	79.53
PGSC0003DMT400057709	Potato	plasma membrane	78.5	78.2
Solyc02g079220.2.1	Tomato	nucleus	77.93	77.63
Solyc03g006650.1.1	Tomato	plasma membrane	76.39	76.83
PGSC0003DMT400012931	Potato	plasma membrane	77.16	76.72
CDY62955	Canola	extracellular, plasma membrane	25.34	63.46
CDY33433	Canola	cytosol, peroxisome, plasma membrane	34.74	61.15
CDY53930	Canola	golgi, plasma membrane, vacuole	60.46	61.05
CDY29325	Canola	golgi, plasma membrane, vacuole	60.46	61.05
CDY66084	Canola	golgi, plasma membrane, vacuole	42.99	60.7
CDY33432	Canola	plasma membrane	59.31	60.47
CDY42509	Canola	golgi, plasma membrane, vacuole	59.88	60.47
CDY22788	Canola	golgi, plasma membrane, vacuole	59.88	60.47
CDY33434	Canola	plasma membrane	59.12	60.27
CDY36072	Canola	plasma membrane	49.52	60.14
CDY02218	Canola	plasma membrane	49.71	59.95
CDX82272	Canola	plasma membrane	49.33	59.91
CDY62951	Canola	plasma membrane	49.71	59.54
CDY25359	Canola	plasma membrane	48.94	59.44
CDY33431	Canola	plasma membrane	48.94	59.44
CDY38688	Canola	plasma membrane	48.75	58.93
CDY45759	Canola	plasma membrane	58.54	58.43
CDY68476	Canola	plasma membrane	12.28	58.18
CDY62952	Canola	golgi, plasma membrane, vacuole	58.73	58.17
CDY24593	Canola	plasma membrane	48.94	57.95
CDY07098	Canola	plasma membrane	55.47	56.89
CDY22024	Canola	plasma membrane	55.28	56.69
CDX90958	Canola	plasma membrane	55.28	56.14
CDY62956	Canola	cytosol	4.41	56.1
CDY19773	Canola	plasma membrane	57.2	56.02
CDX87052	Canola	peroxisome, plasma membrane, vacuole	57.2	56.02
CDY67102	Canola	cytosol, plasma membrane, vacuole	53.93	55.86
CDX80558	Canola	plasma membrane	53.55	55.03
CDX88227	Canola	plasma membrane	50.1	52.3
CDY52634	Canola	plasma membrane	50.1	52.1
CDY47467	Canola	plasma membrane	48.56	51.53
CDY23062	Canola	golgi, plasma membrane, vacuole	42.23	51.52
CDY26777	Canola	plasma membrane	45.3	51.3
CDY02138	Canola	golgi, plasma membrane, vacuole	42.03	51.29
CDY18836	Canola	plasma membrane	49.9	51.28
CDY27726	Canola	golgi, plasma membrane, vacuole	49.52	51.19
CDY05216	Canola	plasma membrane	49.52	51.19
CDY66862	Canola	plasma membrane	49.33	50.79
CDX91766	Canola	golgi, plasma membrane, vacuole	48.94	50.6
CDX87534	Canola	plasma membrane	46.45	50.31
CDY06700	Canola	plasma membrane	47.6	49.7
CDX74116	Canola	plasma membrane	48.37	49.61
CDY49992	Canola	golgi, plasma membrane, vacuole	48.37	49.61
CDX86492	Canola	plasma membrane	47.41	49.6
CDY10269	Canola	plasma membrane	47.41	49.5
CDX88350	Canola	plasma membrane	48.37	49.32
CDY15608	Canola	plasma membrane	47.02	49.2
CDX91815	Canola	plasma membrane	54.32	33.69

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	GO:A0A078HAQ7	UniProt:A0A078HAQ7	EnsemblPlants:CDY34842	ProteinID:CDY34842
ProteinID:CDY34842.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00057402001	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216
ScanProsite:PS00217	PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF357	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt
InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI0004EEEDA3	SEG:seg	:

Description

BnaA09g47680DBnaA09g47680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAQ7]

Coordinates

chrLK032342:-:135863..138943

Molecular Weight (calculated)

57533.0 Da

IEP (calculated)

9.305

GRAVY (calculated)

0.484

Length

521 amino acids

Sequence
(BLAST)

001: MPVGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLRRFFPS VYRKQQEDAT TNQYCQYDSP TLTLFTSSLY LAALVSSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQSVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITLGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWKNLLRRKY RPHLTMAIMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDKWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNGLEM GKSSNQGTKR V

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.