Factsheet for PGSC0003DMT400057709

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 2
golgi 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g079220.2.1	Tomato	nucleus	97.32	97.32
PGSC0003DMT400012931	Potato	plasma membrane	86.23	86.07
KRH49937	Soybean	endoplasmic reticulum	78.97	79.73
VIT_00s0181g00010.t01	Wine grape	plasma membrane	78.97	79.58
Bra031762.1-P	Field mustard	plasma membrane	78.39	78.69
KRH41938	Soybean	mitochondrion, nucleus	78.01	78.61
CDY34842	Canola	plasma membrane	78.2	78.5
AT1G11260.1	Thale cress	plasma membrane	78.01	78.16
Bra019870.1-P	Field mustard	plasma membrane	78.01	78.16
CDX97945	Canola	plasma membrane	78.01	78.16
CDY19352	Canola	plasma membrane	77.63	77.78
AT4G21480.1	Thale cress	plasma membrane	74.0	77.09
Bra013529.1-P	Field mustard	plasma membrane	73.61	75.05
CDX82827	Canola	golgi, plasma membrane, vacuole	73.61	75.05
CDX79066	Canola	plasma membrane	73.61	75.05
CDY34655	Canola	plasma membrane	77.63	72.89
PGSC0003DMT400094737	Potato	golgi, plasma membrane, vacuole	68.07	67.42
PGSC0003DMT400064529	Potato	plasma membrane	60.99	62.3
PGSC0003DMT400064478	Potato	plasma membrane	60.8	62.11
PGSC0003DMT400042165	Potato	peroxisome, plasma membrane, vacuole	59.27	61.26
PGSC0003DMT400048537	Potato	plasma membrane	55.45	56.97
PGSC0003DMT400048280	Potato	plasma membrane	55.64	56.73
PGSC0003DMT400048535	Potato	peroxisome, plasma membrane, vacuole	54.3	55.8
PGSC0003DMT400081426	Potato	mitochondrion	55.45	55.45
PGSC0003DMT400000990	Potato	plasma membrane	48.95	55.41
PGSC0003DMT400070558	Potato	plasma membrane	53.54	54.26
PGSC0003DMT400034820	Potato	plasma membrane	47.61	51.13
PGSC0003DMT400016373	Potato	plasma membrane	49.33	50.19
PGSC0003DMT400030841	Potato	plasma membrane	46.65	49.9
PGSC0003DMT400034821	Potato	plasma membrane	44.74	49.89

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:102596883	MapMan:24.2.2.1.6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:IPR020846	UniProt:M1C1I0	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083
EnsemblPlantsGene:PGSC0003DMG400022402	PGSC:PGSC0003DMG400022402	EnsemblPlants:PGSC0003DMT400057709	PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217
PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF357	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS
TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI000294C3CD	RefSeq:XP_006347143.1	SEG:seg	:

Description

Hexose transporter 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400022402]

Coordinates

chr2:+:34969852..34973435

Molecular Weight (calculated)

57715.5 Da

IEP (calculated)

9.396

GRAVY (calculated)

0.561

Length

523 amino acids

Sequence
(BLAST)

001: MAGGGGIGPG NGKEYPGELT LYVTVTCIVA AMGGLIFGYD IGISGGVTSM DSFLSRFFPS VFRKQKADNS TNQYCKFDSQ TLTMFTSSLY LAALVSSLVA
101: STVTRKLGRR LSMLSGGILF CAGALINGFA QNVAMLIIGR IFLGFGIGFA NQSVPLYLSE MAPYKYRGAL NIGFQLSITI GILVASVLNY FFAKIHWGWR
201: LSLGGAMVPA LIITVGSLFL PETPNSMIER GNHDEAKARL KRIRGIENVD EEFNDLVVAS EASRKIEHPW RNLLQKKYRP HLTMAIMIPF FQQLTGINVI
301: MFYAPVLFKT IGFGTDASLM SAVITGGVNV IATVVSIYYV DKLGRRFLFL EGGIQMLFCQ IAVAILIAIK FGVNGTPGEL PKWYAIVVVI FICVYVAGFA
401: WSWGPLGWLV PSEIFPLEIR SAAQSINVSV NMIFTFAVAQ IFLTMLCHLK FGLFLFFAFF VVIMTVFIYF FLPETKNIPI EEMVIVWKEH WFWSKFMTEV
501: DYPGNRNGTG VEMAKGGAGY KIV

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.