Factsheet for Solyc02g079220.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1
plastid 2
golgi 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400057709	Potato	plasma membrane	97.32	97.32
Solyc03g006650.1.1	Tomato	plasma membrane	84.89	85.71
VIT_00s0181g00010.t01	Wine grape	plasma membrane	78.39	79.0
KRH49937	Soybean	endoplasmic reticulum	78.01	78.76
KRH41938	Soybean	mitochondrion, nucleus	77.82	78.42
AT1G11260.1	Thale cress	plasma membrane	78.01	78.16
Bra031762.1-P	Field mustard	plasma membrane	77.82	78.12
CDY34842	Canola	plasma membrane	77.63	77.93
Bra019870.1-P	Field mustard	plasma membrane	77.44	77.59
CDX97945	Canola	plasma membrane	77.44	77.59
AT4G21480.1	Thale cress	plasma membrane	74.19	77.29
CDY19352	Canola	plasma membrane	77.06	77.2
Bra013529.1-P	Field mustard	plasma membrane	73.61	75.05
CDX79066	Canola	plasma membrane	73.61	75.05
CDX82827	Canola	golgi, plasma membrane, vacuole	73.23	74.66
CDY34655	Canola	plasma membrane	77.06	72.35
Solyc08g080300.1.1	Tomato	golgi, plasma membrane, vacuole	67.3	66.67
Solyc01g008240.2.1	Tomato	peroxisome, plasma membrane, vacuole	58.32	60.4
Solyc03g078600.1.1	Tomato	plasma membrane	49.71	59.5
Solyc05g018230.2.1	Tomato	plasma membrane	44.36	56.59
Solyc07g006970.2.1	Tomato	plasma membrane	55.26	56.34
Solyc12g008320.1.1	Tomato	plasma membrane	54.49	55.34
Solyc09g075820.2.1	Tomato	nucleus	54.68	54.68
Solyc03g093410.2.1	Tomato	plasma membrane	53.54	54.47
Solyc03g005140.1.1	Tomato	plasma membrane	47.8	51.33
Solyc06g054270.2.1	Tomato	plasma membrane	47.8	51.12
Solyc04g074070.1.1	Tomato	plasma membrane	48.76	50.1
Solyc01g010530.1.1	Tomato	plasma membrane	46.65	49.9
Solyc03g005150.2.1	Tomato	plasma membrane	45.7	49.08
Solyc03g093400.2.1	Tomato	plasma membrane	55.64	41.45

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	UniProt:D0EXD9	GO:GO:0003674	GO:GO:0005215	GO:GO:0005351
GO:GO:0005355	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0008643	GO:GO:0015992
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0035428	GO:GO:0046323	GO:GO:0055085
GO:GO:1902600	GO:GO:1904659	EMBL:GQ911580	InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like
InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217	PFscan:PS50850
PANTHER:PTHR23500	PANTHER:PTHR23500:SF357	SUPFAM:SSF103473	EnsemblPlantsGene:Solyc02g079220.2	EnsemblPlants:Solyc02g079220.2.1	InterPro:Sugar/inositol_transpt
InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI0001B9B1CA	SEG:seg	:

Description

Hexose transporter 1 [Source:UniProtKB/TrEMBL;Acc:D0EXD9]

Coordinates

chr2:+:43831629..43835183

Molecular Weight (calculated)

57859.7 Da

IEP (calculated)

9.366

GRAVY (calculated)

0.543

Length

523 amino acids

Sequence
(BLAST)

001: MAGGGGIGPG NGKEYPGELT LYVTMTCIVA AMGGLIFGYD IGISGGVTSM DTFLNRFFPS VYRKQKADNS TNQYCKFDSQ TLTMFTSSLY LAALVSSLVA
101: STVTRKLGRR LSMLSGGILF CAGALINGFA QNVAMLIIGR IFLGFGIGFA NQSVPLYLSE MAPYKYRGAL NIGFQLSITI GILVANVLNY FFAKIHWGWR
201: LSLGGAMVPA LIITIGSLFL PETPNSMIER GNHDEAKARL KRIRGIEDVD EEFNDLVIAS EASRKIEHPW RNLLQKKYRP HLTMAIMIPF FQQLTGINVI
301: MFYAPVLFKT IGFGTDASLM SAVITGGINV IATIVSIYYV DKLGRRFLFL EGGIQMLFSQ IAVAILIAIK FGVNGTPGEL PKWYAIVVVI FICVYVAGFA
401: WSWGPLGWLV PSEIFPLEIR SAAQSINVSV NMIFTFAVAQ VFLTMLCHLK FGLFLFFAFF VVIMTVFIYF FLPETKNIPI EEMVIVWKEH WFWSKFMTEV
501: DYPGTRNGTA VEMAKGGAGY KIV

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.