Factsheet for Solyc03g078600.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400064478	Potato	plasma membrane	89.47	76.37
PGSC0003DMT400064529	Potato	plasma membrane	89.24	76.17
VIT_14s0083g00020.t01	Wine grape	plasma membrane	63.16	57.14
VIT_14s0083g00030.t01	Wine grape	plasma membrane	63.62	52.95
Solyc03g006650.1.1	Tomato	plasma membrane	59.95	50.58
Solyc02g079220.2.1	Tomato	nucleus	59.5	49.71
VIT_14s0083g00040.t01	Wine grape	plasma membrane	60.41	49.35
Solyc08g080300.1.1	Tomato	golgi, plasma membrane, vacuole	57.21	47.35
Solyc01g008240.2.1	Tomato	peroxisome, plasma membrane, vacuole	53.78	46.53
Solyc09g075820.2.1	Tomato	nucleus	54.92	45.89
Solyc05g018230.2.1	Tomato	plasma membrane	41.88	44.63
Solyc03g093410.2.1	Tomato	plasma membrane	51.95	44.16
Solyc03g005140.1.1	Tomato	plasma membrane	48.05	43.12
Solyc07g006970.2.1	Tomato	plasma membrane	50.34	42.88
Solyc06g054270.2.1	Tomato	plasma membrane	47.37	42.33
Solyc01g010530.1.1	Tomato	plasma membrane	47.37	42.33
Solyc12g008320.1.1	Tomato	plasma membrane	48.74	41.36
Solyc03g005150.2.1	Tomato	plasma membrane	46.0	41.27
Solyc04g074070.1.1	Tomato	plasma membrane	43.94	37.72
Solyc03g093400.2.1	Tomato	plasma membrane	54.69	34.05

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	GO:GO:0003674	GO:GO:0005215	GO:GO:0005351	GO:GO:0005355
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0035428	GO:GO:0046323	GO:GO:0055085	GO:GO:1902600	GO:GO:1904659
InterPro:IPR020846	UniProt:K4BHT8	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083
PRINTS:PR00171	PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF357	SUPFAM:SSF103473	EnsemblPlantsGene:Solyc03g078600.1
EnsemblPlants:Solyc03g078600.1.1	InterPro:Sugar/inositol_transpt	TMHMM:TMhelix	UniParc:UPI0002767FBE	SEG:seg	:

Description

No Description!

Coordinates

chr3:+:51228904..51230368

Molecular Weight (calculated)

48457.9 Da

IEP (calculated)

8.331

GRAVY (calculated)

0.667

Length

437 amino acids

Sequence
(BLAST)

001: MAAMGGLNIG YDIGISGGVT SMDPFLKLFF PSVYRKEALD TSTNQYCKFD SQLLTLFTSS LYEAAFFTSF VASSVSKKHG RKVTMFLGGL FFLFGAVLNA
101: AAVHISMLIL GRILIGIGVG FANQDTFNVL FQLAITFGIL VANIVNFLSD KISAGWGWRV SLGGAAFLGV DNINAELKDL LEASEASKKV QHPWEVLFRV
201: RKYKPQLILS TLIPTFQQLT GINEVMFYAP LLFQTLGFKS NASLMSAVIT GAVNVGATLI SVYCTDRYGI KVLLLTDGVL MCVFQGLVAG LIGWKFITTG
301: MIPTVLPQSY AILVVLCICI FVTAFAFSWV PLGWLIPSEI SPLEVRSAAQ SITVSMNMLF TFGVAQVFLK MLCWMKFGLF IFFAAFVFIM TLFVYIYVPE
401: TKNIPIEEMS RVWRDHWYWK NYTDDVDTQS PAKEVVF

Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)

001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV

Arabidopsis Description

STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.