Factsheet for Solyc09g075820.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
peroxisome 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400081426	Potato	mitochondrion	97.51	97.51
KRH77866	Soybean	peroxisome, plasma membrane, vacuole	85.85	86.02
KRH27626	Soybean	peroxisome, plasma membrane, vacuole	85.66	85.82
Os03t0218400-01	Rice	plasma membrane	80.5	81.75
Bra036575.1-P	Field mustard	peroxisome, plasma membrane, vacuole	82.98	81.58
CDX87052	Canola	peroxisome, plasma membrane, vacuole	82.98	81.58
CDY19773	Canola	plasma membrane	82.98	81.58
AT5G26340.1	Thale cress	plasma membrane	81.84	81.37
Zm00001d028230_P001	Maize	plasma membrane	79.73	81.13
EER92634	Sorghum	plasma membrane	79.92	80.85
VIT_05s0020g03140.t01	Wine grape	plasma membrane	82.79	80.78
TraesCS4D01G243100.1	Wheat	plasma membrane	78.78	80.16
TraesCS4B01G243500.1	Wheat	plasma membrane	78.78	80.16
GSMUA_Achr7P27070_001	Banana	plasma membrane	73.04	79.58
TraesCS4A01G066200.1	Wheat	plasma membrane	78.2	79.42
CDY67102	Canola	cytosol, plasma membrane, vacuole	76.29	79.32
GSMUA_Achr4P03620_001	Banana	plasma membrane	73.42	78.85
KRH35542	Soybean	plasma membrane	71.13	78.32
CDX80558	Canola	plasma membrane	75.91	78.3
KRG91268	Soybean	plasma membrane	75.53	77.15
KRH35541	Soybean	peroxisome, plasma membrane, vacuole	68.26	71.4
TraesCS6A01G351600.1	Wheat	cytosol, peroxisome, plasma membrane	47.61	69.36
TraesCS6B01G384700.1	Wheat	plasma membrane	69.41	69.14
HORVU6Hr1G084290.24	Barley	golgi, plasma membrane	66.73	62.32
Solyc03g005140.1.1	Tomato	plasma membrane	55.83	59.96
Solyc01g010530.1.1	Tomato	plasma membrane	54.68	58.49
Solyc06g054270.2.1	Tomato	plasma membrane	54.49	58.28
Solyc05g018230.2.1	Tomato	plasma membrane	45.32	57.8
Solyc07g006970.2.1	Tomato	plasma membrane	54.68	55.75
Solyc03g005150.2.1	Tomato	plasma membrane	51.82	55.65
Solyc12g008320.1.1	Tomato	plasma membrane	54.49	55.34
Solyc01g008240.2.1	Tomato	peroxisome, plasma membrane, vacuole	53.15	55.05
Solyc03g006650.1.1	Tomato	plasma membrane	54.49	55.02
Solyc03g078600.1.1	Tomato	plasma membrane	45.89	54.92
Solyc02g079220.2.1	Tomato	nucleus	54.68	54.68
Solyc03g093410.2.1	Tomato	plasma membrane	52.58	53.5
Solyc08g080300.1.1	Tomato	golgi, plasma membrane, vacuole	51.24	50.76
Solyc04g074070.1.1	Tomato	plasma membrane	46.65	47.94
Solyc03g093400.2.1	Tomato	plasma membrane	54.68	40.74

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	EMBL:AJ132224	GO:GO:0003674	GO:GO:0005215	GO:GO:0005351
GO:GO:0005355	GO:GO:0005358	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810
GO:GO:0006950	GO:GO:0008150	GO:GO:0008643	GO:GO:0008645	GO:GO:0009414	GO:GO:0009506
GO:GO:0009628	GO:GO:0009651	GO:GO:0009679	GO:GO:0009719	GO:GO:0009737	GO:GO:0015145
GO:GO:0015749	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0035428
GO:GO:0046323	GO:GO:0055085	GO:GO:1902600	GO:GO:1904659	InterPro:IPR020846	InterPro:MFS_dom
InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216	PFscan:PS50850
PANTHER:PTHR23500	PANTHER:PTHR23500:SF70	UniProt:Q9STA8	SUPFAM:SSF103473	EnsemblPlantsGene:Solyc09g075820.2	EnsemblPlants:Solyc09g075820.2.1
InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI00000A930B	SEG:seg

Description

Hexose transporter [Source:UniProtKB/TrEMBL;Acc:Q9STA8]

Coordinates

chr9:-:67433422..67439302

Molecular Weight (calculated)

57579.0 Da

IEP (calculated)

9.096

GRAVY (calculated)

0.487

Length

523 amino acids

Sequence
(BLAST)

001: MAGGGFTTSG NGGTHFEAKI TPIVIISCIM AATGGLMFGY DVGVSGGVTS MDPFLKKFFP TVYKRTKEPG LDSNYCKYDN QGLQLFTSSL YLAGLTATFF
101: ASYTTRKLGR RLTMLIAGCF FIIGVVLNAA AQDLAMLIIG RILLGCGVGF ANQAVPLFLS EIAPTRIRGG LNILFQLNVT IGILFANLVN YGTAKISGGW
201: GWRLSLGLAG FPAVLLTLGA LFVVETPNSL IERGYLEEGK EVLRKIRGTD NIEPEFLELV EASRVAKQVK HPFRNLLQRK NRPQLIISVA LQIFQQFTGI
301: NAIMFYAPVL FSTLGFGNSA ALYSAVITGA VNVLSTVVSV YSVDKLGRRV LLLEAGVQML LSQIIIAIIL GIKVTDHSDN LSHGWGIFVV VLICTYVSAF
401: AWSWGPLGWL IPSETFPLET RSAGQSVTVC VNLLFTFVMA QAFLSMLCHF KYGIFLFFSG WIFVMSLFVF FLLPETKNVP IEEMTERVWK QHWLWKRFMV
501: DEDDVDMIKK NGHANGYDPT SRL

Best Arabidopsis Sequence Match ( AT5G26340.1 )
(BLAST)

001: MTGGGFATSA NGVEFEAKIT PIVIISCIMA ATGGLMFGYD VGVSGGVTSM PDFLEKFFPV VYRKVVAGAD KDSNYCKYDN QGLQLFTSSL YLAGLTATFF
101: ASYTTRTLGR RLTMLIAGVF FIIGVALNAG AQDLAMLIAG RILLGCGVGF ANQAVPLFLS EIAPTRIRGG LNILFQLNVT IGILFANLVN YGTAKIKGGW
201: GWRLSLGLAG IPALLLTVGA LLVTETPNSL VERGRLDEGK AVLRRIRGTD NVEPEFADLL EASRLAKEVK HPFRNLLQRR NRPQLVIAVA LQIFQQCTGI
301: NAIMFYAPVL FSTLGFGSDA SLYSAVVTGA VNVLSTLVSI YSVDKVGRRV LLLEAGVQMF FSQVVIAIIL GVKVTDTSTN LSKGFAILVV VMICTYVAAF
401: AWSWGPLGWL IPSETFPLET RSAGQSVTVC VNLLFTFIIA QAFLSMLCHF KFGIFIFFSA WVLIMSVFVM FLLPETKNIP IEEMTERVWK KHWFWARFMD
501: DHNDHEFVNG EKSNGKSNGF DPSTRL

Arabidopsis Description

STP13STP13 [Source:UniProtKB/TrEMBL;Acc:A0A178UHA7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.