CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35542	Soybean	plasma membrane	89.45	96.42
KRH27626	Soybean	peroxisome, plasma membrane, vacuole	82.03	80.46
KRH77866	Soybean	peroxisome, plasma membrane, vacuole	81.84	80.27
Solyc09g075820.2.1	Tomato	nucleus	77.15	75.53
PGSC0003DMT400081426	Potato	mitochondrion	76.56	74.95
Os03t0218400-01	Rice	plasma membrane	74.41	73.98
AT5G26340.1	Thale cress	plasma membrane	75.59	73.57
Zm00001d028230_P001	Maize	plasma membrane	73.63	73.35
EER92634	Sorghum	plasma membrane	74.02	73.31
TraesCS4D01G243100.1	Wheat	plasma membrane	73.44	73.15
TraesCS4B01G243500.1	Wheat	plasma membrane	73.44	73.15
VIT_05s0020g03140.t01	Wine grape	plasma membrane	76.37	72.95
Bra036575.1-P	Field mustard	peroxisome, plasma membrane, vacuole	75.39	72.56
CDX87052	Canola	peroxisome, plasma membrane, vacuole	75.39	72.56
CDY19773	Canola	plasma membrane	75.39	72.56
TraesCS4A01G066200.1	Wheat	plasma membrane	72.85	72.43
CDY67102	Canola	cytosol, plasma membrane, vacuole	71.09	72.37
GSMUA_Achr7P27070_001	Banana	plasma membrane	67.58	72.08
GSMUA_Achr4P03620_001	Banana	plasma membrane	67.97	71.46
CDX80558	Canola	plasma membrane	70.31	71.01
KRH35541	Soybean	peroxisome, plasma membrane, vacuole	67.19	68.8
TraesCS6A01G351600.1	Wheat	cytosol, peroxisome, plasma membrane	46.88	66.85
TraesCS6B01G384700.1	Wheat	plasma membrane	67.19	65.52
HORVU6Hr1G084290.24	Barley	golgi, plasma membrane	64.84	59.29
KRH12902	Soybean	plasma membrane	55.08	55.84
KRH36130	Soybean	plasma membrane	55.66	55.77
KRG90624	Soybean	plasma membrane	55.47	55.58
KRH40901	Soybean	plasma membrane	55.08	55.08
KRH40905	Soybean	plasma membrane	54.88	54.88
KRH49937	Soybean	endoplasmic reticulum	55.27	54.63
KRH41938	Soybean	mitochondrion, nucleus	55.08	54.34
KRH56314	Soybean	plasma membrane	52.93	54.09
KRH37895	Soybean	cytosol, peroxisome, plasma membrane	37.11	53.37
KRH71016	Soybean	plasma membrane	51.95	52.47
KRH56317	Soybean	plasma membrane	51.56	51.76
KRH76334	Soybean	plasma membrane	51.37	51.57
KRH27830	Soybean	plasma membrane	51.56	51.56
KRH60234	Soybean	mitochondrion	50.39	50.49
KRH39352	Soybean	plasma membrane	50.39	50.39
KRH41519	Soybean	plasma membrane	50.2	50.29
KRH62356	Soybean	plasma membrane	49.8	50.1
KRH53073	Soybean	plasma membrane	49.8	50.1
KRH75177	Soybean	plasma membrane	52.15	49.81
KRH07765	Soybean	plasma membrane	49.41	49.41
KRH62355	Soybean	plasma membrane	48.05	48.43
KRH62357	Soybean	plasma membrane	47.85	48.32
KRH16713	Soybean	plasma membrane	47.85	48.23
KRH16714	Soybean	plasma membrane	47.66	48.13
KRH18902	Soybean	plasma membrane	46.88	47.81

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:100799040	MapMan:24.2.2.1.6	EMBL:ACUP02012673	EnsemblPlantsGene:GLYMA_20G144300	GO:GO:0003674
GO:GO:0005215	GO:GO:0005351	GO:GO:0005355	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0035428	GO:GO:0046323
GO:GO:0055085	GO:GO:1902600	GO:GO:1904659	UniProt:I1NGC7	InterPro:IPR020846	EnsemblPlants:KRG91268
ProteinID:KRG91268	ProteinID:KRG91268.1	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083
PRINTS:PR00171	ScanProsite:PS00216	PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF70	SUPFAM:SSF103473
InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI00023DBE92	SEG:seg

Description

hypothetical protein

Coordinates

chr20:-:38268242..38275777

Molecular Weight (calculated)

56391.8 Da

IEP (calculated)

8.135

GRAVY (calculated)

0.527

Length

512 amino acids

Sequence
(BLAST)

001: MAGGGFTTSG GEFEAKITPI VILSCMMAAT GGLMFGYDIG VSGGVTSMPA FLKEFFPEVY RKTVEEEELD SNYCKYDNEK LQLFTSCLYL AGLMATFLAS
101: HITRRQGRRA TMLISGFIFI AGVAFNAAAQ NLAMLIIGRV LLGSGVGFAN QAVPVFLSEI APSRIRGALN ILFQLNITLG ILFSNLVNYA TNKIKGGWGW
201: RLSLGLGGLP ALLLTLGAFL VVDTPNSLIE RGHLEEGKSV LRKIRGIDNI EPEFLELLDA SRVAKEVKHP FRNILKRKNR PQLVISIALQ IFQQFTGINA
301: IMFYAPVLFN TLGFKNDASL YSAVITGAVN VVSTVVSIYS VDRLGRKMLL LEAGAQMFLS QLVIAVIIGM KVKDHSEDLS KGFAVLVVVL VCIFVSAFAW
401: SWGPLSWLIP SEIFPLETRS AGQSIAVCVN LLCTFVIAQA FLSMLCFFKF GIFLFFSGCV LIMSTFVLLL LPETKNVPIE EMTERVWKQH WLWNRFIDED
501: DCVKEEKVVT GN

Best Arabidopsis Sequence Match ( AT5G26340.1 )
(BLAST)

001: MTGGGFATSA NGVEFEAKIT PIVIISCIMA ATGGLMFGYD VGVSGGVTSM PDFLEKFFPV VYRKVVAGAD KDSNYCKYDN QGLQLFTSSL YLAGLTATFF
101: ASYTTRTLGR RLTMLIAGVF FIIGVALNAG AQDLAMLIAG RILLGCGVGF ANQAVPLFLS EIAPTRIRGG LNILFQLNVT IGILFANLVN YGTAKIKGGW
201: GWRLSLGLAG IPALLLTVGA LLVTETPNSL VERGRLDEGK AVLRRIRGTD NVEPEFADLL EASRLAKEVK HPFRNLLQRR NRPQLVIAVA LQIFQQCTGI
301: NAIMFYAPVL FSTLGFGSDA SLYSAVVTGA VNVLSTLVSI YSVDKVGRRV LLLEAGVQMF FSQVVIAIIL GVKVTDTSTN LSKGFAILVV VMICTYVAAF
401: AWSWGPLGWL IPSETFPLET RSAGQSVTVC VNLLFTFIIA QAFLSMLCHF KFGIFIFFSA WVLIMSVFVM FLLPETKNIP IEEMTERVWK KHWFWARFMD
501: DHNDHEFVNG EKSNGKSNGF DPSTRL

Arabidopsis Description

STP13STP13 [Source:UniProtKB/TrEMBL;Acc:A0A178UHA7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.