Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 4
- golgi 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19773 | Canola | plasma membrane | 95.25 | 94.17 |
| CDX87052 | Canola | peroxisome, plasma membrane, vacuole | 95.25 | 94.17 |
| Bra036575.1-P | Field mustard | peroxisome, plasma membrane, vacuole | 95.25 | 94.17 |
| CDY67102 | Canola | cytosol, plasma membrane, vacuole | 84.79 | 88.67 |
| CDX80558 | Canola | plasma membrane | 84.6 | 87.77 |
| KRH77866 | Soybean | peroxisome, plasma membrane, vacuole | 83.27 | 83.91 |
| KRH27626 | Soybean | peroxisome, plasma membrane, vacuole | 82.13 | 82.76 |
| TraesCS4D01G243100.1 | Wheat | plasma membrane | 80.8 | 82.68 |
| TraesCS4B01G243500.1 | Wheat | plasma membrane | 80.8 | 82.68 |
| TraesCS4A01G066200.1 | Wheat | plasma membrane | 80.61 | 82.33 |
| Zm00001d028230_P001 | Maize | plasma membrane | 80.42 | 82.3 |
| VIT_05s0020g03140.t01 | Wine grape | plasma membrane | 83.65 | 82.09 |
| PGSC0003DMT400081426 | Potato | mitochondrion | 81.56 | 82.03 |
| Solyc09g075820.2.1 | Tomato | nucleus | 81.37 | 81.84 |
| EER92634 | Sorghum | plasma membrane | 80.23 | 81.62 |
| Os03t0218400-01 | Rice | plasma membrane | 79.85 | 81.55 |
| GSMUA_Achr4P03620_001 | Banana | plasma membrane | 73.57 | 79.47 |
| GSMUA_Achr7P27070_001 | Banana | plasma membrane | 72.24 | 79.17 |
| KRH35542 | Soybean | plasma membrane | 69.2 | 76.63 |
| KRG91268 | Soybean | plasma membrane | 73.57 | 75.59 |
| KRH35541 | Soybean | peroxisome, plasma membrane, vacuole | 70.72 | 74.4 |
| TraesCS6B01G384700.1 | Wheat | plasma membrane | 68.44 | 68.57 |
| TraesCS6A01G351600.1 | Wheat | cytosol, peroxisome, plasma membrane | 46.39 | 67.97 |
| HORVU6Hr1G084290.24 | Barley | golgi, plasma membrane | 64.83 | 60.89 |
| AT4G02050.1 | Thale cress | plasma membrane | 59.13 | 60.62 |
| AT5G26250.1 | Thale cress | plasma membrane | 56.27 | 58.38 |
| AT3G05960.1 | Thale cress | plasma membrane | 55.51 | 57.59 |
| AT4G21480.1 | Thale cress | plasma membrane | 54.94 | 57.57 |
| AT1G11260.1 | Thale cress | plasma membrane | 56.84 | 57.28 |
| AT5G23270.1 | Thale cress | plasma membrane | 54.94 | 56.23 |
| AT1G77210.1 | Thale cress | plasma membrane | 53.61 | 55.95 |
| AT1G50310.1 | Thale cress | plasma membrane | 53.99 | 54.93 |
| AT3G19940.1 | Thale cress | plasma membrane | 53.23 | 54.47 |
| AT3G19930.1 | Thale cress | plasma membrane | 52.09 | 53.31 |
| AT1G07340.1 | Thale cress | plasma membrane | 50.19 | 53.01 |
| AT1G34580.1 | Thale cress | cytosol, golgi, plasma membrane | 47.72 | 49.6 |
| AT5G61520.1 | Thale cress | plasma membrane | 47.34 | 48.44 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.1.6 | EntrezGene:832703 | UniProt:A0A178UHA7 | ProteinID:AAC26243.1 | ProteinID:AED93553.1 |
| EMBL:AF250340 | EMBL:AJ344338 | EMBL:AK230023 | ArrayExpress:AT5G26340 | EnsemblPlantsGene:AT5G26340 | RefSeq:AT5G26340 |
| TAIR:AT5G26340 | RefSeq:AT5G26340-TAIR-G | EnsemblPlants:AT5G26340.1 | TAIR:AT5G26340.1 | EMBL:AY045591 | EMBL:AY052692 |
| EMBL:AY143909 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005358 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008643 | GO:GO:0009414 |
| GO:GO:0009506 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009679 | GO:GO:0009719 | GO:GO:0009737 |
| GO:GO:0015145 | GO:GO:0015293 | GO:GO:0015749 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 |
| GO:GO:0035428 | GO:GO:0046323 | GO:GO:0055085 | GO:GO:1904659 | InterPro:IPR020846 | InterPro:MFS_dom |
| InterPro:MFS_sugar_transport-like | InterPro:MFS_trans_sf | Symbol:MSS1 | RefSeq:NP_198006.1 | ProteinID:OAO92031.1 | PFAM:PF00083 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000054 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001185 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00171 | ScanProsite:PS00216 | PFscan:PS50850 |
| PANTHER:PTHR23500 | PANTHER:PTHR23500:SF70 | UniProt:Q94AZ2 | SUPFAM:SSF103473 | InterPro:Sugar/inositol_transpt | InterPro:Sugar_transporter_CS |
| TIGRFAMs:TIGR00879 | TMHMM:TMhelix | UniParc:UPI0000052A3A | SEG:seg | : | : |
Description
STP13STP13 [Source:UniProtKB/TrEMBL;Acc:A0A178UHA7]
Coordinates
chr5:-:9243398..9247540
Molecular Weight (calculated)
57422.7 Da
IEP (calculated)
8.978
GRAVY (calculated)
0.520
Length
526 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGGGFATSA NGVEFEAKIT PIVIISCIMA ATGGLMFGYD VGVSGGVTSM PDFLEKFFPV VYRKVVAGAD KDSNYCKYDN QGLQLFTSSL YLAGLTATFF
101: ASYTTRTLGR RLTMLIAGVF FIIGVALNAG AQDLAMLIAG RILLGCGVGF ANQAVPLFLS EIAPTRIRGG LNILFQLNVT IGILFANLVN YGTAKIKGGW
201: GWRLSLGLAG IPALLLTVGA LLVTETPNSL VERGRLDEGK AVLRRIRGTD NVEPEFADLL EASRLAKEVK HPFRNLLQRR NRPQLVIAVA LQIFQQCTGI
301: NAIMFYAPVL FSTLGFGSDA SLYSAVVTGA VNVLSTLVSI YSVDKVGRRV LLLEAGVQMF FSQVVIAIIL GVKVTDTSTN LSKGFAILVV VMICTYVAAF
401: AWSWGPLGWL IPSETFPLET RSAGQSVTVC VNLLFTFIIA QAFLSMLCHF KFGIFIFFSA WVLIMSVFVM FLLPETKNIP IEEMTERVWK KHWFWARFMD
501: DHNDHEFVNG EKSNGKSNGF DPSTRL
101: ASYTTRTLGR RLTMLIAGVF FIIGVALNAG AQDLAMLIAG RILLGCGVGF ANQAVPLFLS EIAPTRIRGG LNILFQLNVT IGILFANLVN YGTAKIKGGW
201: GWRLSLGLAG IPALLLTVGA LLVTETPNSL VERGRLDEGK AVLRRIRGTD NVEPEFADLL EASRLAKEVK HPFRNLLQRR NRPQLVIAVA LQIFQQCTGI
301: NAIMFYAPVL FSTLGFGSDA SLYSAVVTGA VNVLSTLVSI YSVDKVGRRV LLLEAGVQMF FSQVVIAIIL GVKVTDTSTN LSKGFAILVV VMICTYVAAF
401: AWSWGPLGWL IPSETFPLET RSAGQSVTVC VNLLFTFIIA QAFLSMLCHF KFGIFIFFSA WVLIMSVFVM FLLPETKNIP IEEMTERVWK KHWFWARFMD
501: DHNDHEFVNG EKSNGKSNGF DPSTRL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.