CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, plasma membrane

Predictor Summary:

nucleus 1
plastid 2
peroxisome 2
plasma membrane 2
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27626	Soybean	peroxisome, plasma membrane, vacuole	97.51	97.51
Solyc09g075820.2.1	Tomato	nucleus	86.02	85.85
PGSC0003DMT400081426	Potato	mitochondrion	85.25	85.09
KRH35542	Soybean	plasma membrane	76.44	84.0
Zm00001d028230_P001	Maize	plasma membrane	82.18	83.46
EER92634	Sorghum	plasma membrane	82.57	83.37
Os03t0218400-01	Rice	plasma membrane	82.18	83.3
AT5G26340.1	Thale cress	plasma membrane	83.91	83.27
Bra036575.1-P	Field mustard	peroxisome, plasma membrane, vacuole	84.29	82.71
CDY19773	Canola	plasma membrane	84.29	82.71
CDX87052	Canola	peroxisome, plasma membrane, vacuole	84.29	82.71
TraesCS4B01G243500.1	Wheat	plasma membrane	80.65	81.91
TraesCS4D01G243100.1	Wheat	plasma membrane	80.65	81.91
VIT_05s0020g03140.t01	Wine grape	plasma membrane	84.1	81.9
GSMUA_Achr7P27070_001	Banana	plasma membrane	75.29	81.88
KRG91268	Soybean	plasma membrane	80.27	81.84
GSMUA_Achr4P03620_001	Banana	plasma membrane	76.05	81.52
TraesCS4A01G066200.1	Wheat	plasma membrane	80.08	81.17
CDY67102	Canola	cytosol, plasma membrane, vacuole	77.01	79.92
CDX80558	Canola	plasma membrane	77.01	79.29
KRH35541	Soybean	peroxisome, plasma membrane, vacuole	72.22	75.4
TraesCS6A01G351600.1	Wheat	cytosol, peroxisome, plasma membrane	50.0	72.7
TraesCS6B01G384700.1	Wheat	plasma membrane	71.65	71.24
HORVU6Hr1G084290.24	Barley	golgi, plasma membrane	68.58	63.93
KRH40901	Soybean	plasma membrane	55.94	57.03
KRH12902	Soybean	plasma membrane	55.17	57.03
KRH36130	Soybean	plasma membrane	55.75	56.95
KRH40905	Soybean	plasma membrane	55.75	56.84
KRH49937	Soybean	endoplasmic reticulum	56.32	56.76
KRH41938	Soybean	mitochondrion, nucleus	55.94	56.26
KRG90624	Soybean	plasma membrane	54.98	56.16
KRH56314	Soybean	plasma membrane	53.64	55.89
KRH76334	Soybean	plasma membrane	54.21	55.49
KRH39352	Soybean	plasma membrane	53.45	54.49
KRH37895	Soybean	cytosol, peroxisome, plasma membrane	36.97	54.21
KRH56317	Soybean	plasma membrane	52.68	53.92
KRH27830	Soybean	plasma membrane	52.68	53.71
KRH41519	Soybean	plasma membrane	50.57	51.66
KRH71016	Soybean	plasma membrane	50.0	51.48
KRH60234	Soybean	mitochondrion	50.38	51.47
KRH53073	Soybean	plasma membrane	50.0	51.28
KRH07765	Soybean	plasma membrane	49.81	50.78
KRH62356	Soybean	plasma membrane	49.23	50.49
KRH75177	Soybean	plasma membrane	51.34	50.0
KRH62355	Soybean	plasma membrane	48.28	49.61
KRH62357	Soybean	plasma membrane	47.89	49.31
KRH16714	Soybean	plasma membrane	47.89	49.31
KRH16713	Soybean	plasma membrane	47.51	48.82
KRH18902	Soybean	plasma membrane	45.98	47.81

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:100810831	MapMan:24.2.2.1.6	UniProt:A0A0R0LF34	EMBL:ACUP02000685	EnsemblPlantsGene:GLYMA_01G238800
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0022891	GO:GO:0055085	InterPro:IPR020846	EnsemblPlants:KRH77866
ProteinID:KRH77866	ProteinID:KRH77866.1	InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083
PRINTS:PR00171	ScanProsite:PS00216	PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF70	SUPFAM:SSF103473
InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS	TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI00018C69A7	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:56316912..56322632

Molecular Weight (calculated)

57193.6 Da

IEP (calculated)

9.450

GRAVY (calculated)

0.511

Length

522 amino acids

Sequence
(BLAST)

001: MAGGGFTSGG GAGDFEAKIT PIVIISCIMA ATGGLMFGYD VGVSGGVTSM PPFLKKFFPT VYRKTVEEKG LDSNYCKYDN QGLQLFTSSL YLAGLTSTFF
101: ASYTTRRLGR RLTMLIAGVF FICGVVLNAA AQDLAMLIVG RILLGCGVGF ANQAVPVFLS EIAPSRIRGA LNILFQLNVT IGILFANLVN YGTNKIKGGW
201: GWRLSLGLAG IPAVLLTLGA LFVVDTPNSL IERGRLEEGK TVLKKIRGTD NIELEFQELL EASRVAKEVK HPFRNLLKRR NRPQLVISVA LQIFQQFTGI
301: NAIMFYAPVL FNTLGFKNDA SLYSAVITGA VNVLSTVVSI YSVDKVGRRI LLLEAGVQMF LSQVVIAIIL GIKVTDHSDD LSKGIAILVV VMVCTFVSSF
401: AWSWGPLGWL IPSETFPLET RSAGQSVTVC VNLLFTFVIA QAFLSMLCHF KFGIFLFFSG WVLVMSVFVL FLLPETKNVP IEEMTERVWK QHWFWKRFID
501: DAADEKVAHV SNGNGFDPTS RL

Best Arabidopsis Sequence Match ( AT5G26340.1 )
(BLAST)

001: MTGGGFATSA NGVEFEAKIT PIVIISCIMA ATGGLMFGYD VGVSGGVTSM PDFLEKFFPV VYRKVVAGAD KDSNYCKYDN QGLQLFTSSL YLAGLTATFF
101: ASYTTRTLGR RLTMLIAGVF FIIGVALNAG AQDLAMLIAG RILLGCGVGF ANQAVPLFLS EIAPTRIRGG LNILFQLNVT IGILFANLVN YGTAKIKGGW
201: GWRLSLGLAG IPALLLTVGA LLVTETPNSL VERGRLDEGK AVLRRIRGTD NVEPEFADLL EASRLAKEVK HPFRNLLQRR NRPQLVIAVA LQIFQQCTGI
301: NAIMFYAPVL FSTLGFGSDA SLYSAVVTGA VNVLSTLVSI YSVDKVGRRV LLLEAGVQMF FSQVVIAIIL GVKVTDTSTN LSKGFAILVV VMICTYVAAF
401: AWSWGPLGWL IPSETFPLET RSAGQSVTVC VNLLFTFIIA QAFLSMLCHF KFGIFIFFSA WVLIMSVFVM FLLPETKNIP IEEMTERVWK KHWFWARFMD
501: DHNDHEFVNG EKSNGKSNGF DPSTRL

Arabidopsis Description

STP13STP13 [Source:UniProtKB/TrEMBL;Acc:A0A178UHA7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.