CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, vacuole
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80558	Canola	plasma membrane	95.43	94.67
AT5G26340.1	Thale cress	plasma membrane	88.67	84.79
CDY19773	Canola	plasma membrane	89.66	84.77
CDX87052	Canola	peroxisome, plasma membrane, vacuole	89.46	84.59
KRH77866	Soybean	peroxisome, plasma membrane, vacuole	79.92	77.01
KRH27626	Soybean	peroxisome, plasma membrane, vacuole	79.52	76.63
Solyc09g075820.2.1	Tomato	nucleus	79.32	76.29
TraesCS4D01G243100.1	Wheat	plasma membrane	77.93	76.26
TraesCS4B01G243500.1	Wheat	plasma membrane	77.93	76.26
Zm00001d028230_P001	Maize	plasma membrane	77.93	76.26
PGSC0003DMT400081426	Potato	mitochondrion	79.13	76.1
Os03t0218400-01	Rice	plasma membrane	77.73	75.92
VIT_05s0020g03140.t01	Wine grape	plasma membrane	80.72	75.75
EER92634	Sorghum	plasma membrane	77.73	75.63
TraesCS4A01G066200.1	Wheat	plasma membrane	77.34	75.53
GSMUA_Achr7P27070_001	Banana	plasma membrane	71.77	75.21
GSMUA_Achr4P03620_001	Banana	plasma membrane	72.76	75.15
KRH35542	Soybean	plasma membrane	68.99	73.05
KRG91268	Soybean	plasma membrane	72.37	71.09
KRH35541	Soybean	peroxisome, plasma membrane, vacuole	70.18	70.6
TraesCS6A01G351600.1	Wheat	cytosol, peroxisome, plasma membrane	46.12	64.62
TraesCS6B01G384700.1	Wheat	plasma membrane	67.4	64.57
CDY07098	Canola	plasma membrane	59.64	59.06
CDY27726	Canola	golgi, plasma membrane, vacuole	58.25	58.13
CDX90958	Canola	plasma membrane	59.24	58.09
CDY22024	Canola	plasma membrane	58.65	58.07
CDY05216	Canola	plasma membrane	58.05	57.94
CDX88227	Canola	plasma membrane	57.46	57.92
CDY52634	Canola	plasma membrane	57.46	57.68
HORVU6Hr1G084290.24	Barley	golgi, plasma membrane	63.82	57.32
CDY49992	Canola	golgi, plasma membrane, vacuole	57.46	56.89
CDX74116	Canola	plasma membrane	57.06	56.5
CDY18836	Canola	plasma membrane	56.86	56.41
CDX82827	Canola	golgi, plasma membrane, vacuole	56.06	54.97
CDY62955	Canola	extracellular, plasma membrane	22.66	54.81
CDX79066	Canola	plasma membrane	55.67	54.58
CDX97945	Canola	plasma membrane	56.26	54.21
CDY34842	Canola	plasma membrane	55.86	53.93
CDY19352	Canola	plasma membrane	55.67	53.64
CDX87534	Canola	plasma membrane	50.89	53.22
CDY66084	Canola	golgi, plasma membrane, vacuole	38.97	53.12
CDY29325	Canola	golgi, plasma membrane, vacuole	54.47	53.1
CDY53930	Canola	golgi, plasma membrane, vacuole	54.47	53.1
CDY02218	Canola	plasma membrane	45.33	52.78
CDY68476	Canola	plasma membrane	11.53	52.73
CDY45759	Canola	plasma membrane	54.67	52.68
CDY26777	Canola	plasma membrane	48.11	52.61
CDY42509	Canola	golgi, plasma membrane, vacuole	53.28	51.94
CDY22788	Canola	golgi, plasma membrane, vacuole	53.28	51.94
CDY33432	Canola	plasma membrane	52.68	51.86
CDY33434	Canola	plasma membrane	52.68	51.86
CDY47467	Canola	plasma membrane	50.5	51.73
CDY33433	Canola	cytosol, peroxisome, plasma membrane	30.42	51.69
CDX88350	Canola	plasma membrane	52.09	51.27
CDX86492	Canola	plasma membrane	50.1	50.6
CDY06700	Canola	plasma membrane	50.1	50.5
CDX82272	Canola	plasma membrane	42.94	50.35
CDY34655	Canola	plasma membrane	55.67	50.27
CDY15608	Canola	plasma membrane	49.7	50.2
CDY62952	Canola	golgi, plasma membrane, vacuole	52.49	50.19
CDY33431	Canola	plasma membrane	42.74	50.12
CDY25359	Canola	plasma membrane	42.74	50.12
CDY62951	Canola	plasma membrane	43.34	50.11
CDY10269	Canola	plasma membrane	49.7	50.1
CDY36072	Canola	plasma membrane	42.54	49.88
CDY38688	Canola	plasma membrane	42.54	49.65
CDY24593	Canola	plasma membrane	42.74	48.86
CDY66862	Canola	plasma membrane	48.31	48.02
CDX91766	Canola	golgi, plasma membrane, vacuole	47.51	47.42
CDY23062	Canola	golgi, plasma membrane, vacuole	40.16	47.31
CDY02138	Canola	golgi, plasma membrane, vacuole	39.76	46.84
CDY62956	Canola	cytosol	3.58	43.9
CDX91815	Canola	plasma membrane	58.85	35.24

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	GO:A0A078JNZ4	UniProt:A0A078JNZ4	EnsemblPlants:CDY67102	ProteinID:CDY67102
ProteinID:CDY67102.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00058833001	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216
PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF70	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS
TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI0004EEF5DC	SEG:seg	:	:

Description

BnaA06g39540DBnaA06g39540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JNZ4]

Coordinates

chrLK035757:-:5546..8960

Molecular Weight (calculated)

55220.8 Da

IEP (calculated)

9.900

GRAVY (calculated)

0.655

Length

503 amino acids

Sequence
(BLAST)

001: MAAGFSTASA KGVDFEAKIT PIVIISSIMA ATGGLMFGYE VGVSGGVTAM PEFLKKFFPV VYGRVEVGAD KNNYYCKYDN QGLQIFTSSL YLAGLTATFF
101: ASYTTRTLGR RPTMLIAGVF YIIGVVLNAA AQDLAMLITG RILLGCGVGF ANQAVPLFLS EIAPTRIRGG LNILFQLNVT IGILFANLVN YGTAKIKGEW
201: GWRLSLGLAG IPALLLTVGA LLVTETPNSL VERGRLNEGK AVLRQIRGTV NVEPEFADLL KASRLAKEVK HPFRNLLQRR NRPHLLIAIA LQIFQQCTGI
301: NAIMFYAPVL FSTLGFGSDA SLYSAVLTGA VNVPSTLVSI YFVDKVGRRV LLLEAGVQMF FSQLVIAIVL GIKVADHSNN LSKGFAVLVV VMICTYVAAF
401: AWSWGPLGWL IPSEIFPLET RSAGQSVTVC VNLLFTFIIA QAFVLMLCHF KFGIFIFFCS WVLVMTLFVM FLLPETKNVP IEEMRESVWK KHWFWARFMV
501: IKM

Best Arabidopsis Sequence Match ( AT5G26340.1 )
(BLAST)

001: MTGGGFATSA NGVEFEAKIT PIVIISCIMA ATGGLMFGYD VGVSGGVTSM PDFLEKFFPV VYRKVVAGAD KDSNYCKYDN QGLQLFTSSL YLAGLTATFF
101: ASYTTRTLGR RLTMLIAGVF FIIGVALNAG AQDLAMLIAG RILLGCGVGF ANQAVPLFLS EIAPTRIRGG LNILFQLNVT IGILFANLVN YGTAKIKGGW
201: GWRLSLGLAG IPALLLTVGA LLVTETPNSL VERGRLDEGK AVLRRIRGTD NVEPEFADLL EASRLAKEVK HPFRNLLQRR NRPQLVIAVA LQIFQQCTGI
301: NAIMFYAPVL FSTLGFGSDA SLYSAVVTGA VNVLSTLVSI YSVDKVGRRV LLLEAGVQMF FSQVVIAIIL GVKVTDTSTN LSKGFAILVV VMICTYVAAF
401: AWSWGPLGWL IPSETFPLET RSAGQSVTVC VNLLFTFIIA QAFLSMLCHF KFGIFIFFSA WVLIMSVFVM FLLPETKNIP IEEMTERVWK KHWFWARFMD
501: DHNDHEFVNG EKSNGKSNGF DPSTRL

Arabidopsis Description

STP13STP13 [Source:UniProtKB/TrEMBL;Acc:A0A178UHA7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.