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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • peroxisome 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:peroxisome, plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra030678.1-P Field mustard plasma membrane 99.4 99.4
CDY15608 Canola plasma membrane 99.2 99.2
CDY10269 Canola plasma membrane 89.76 89.58
CDY06700 Canola plasma membrane 89.56 89.38
AT1G07340.1 Thale cress plasma membrane 84.54 84.54
CDX88227 Canola plasma membrane 58.03 57.92
CDY52634 Canola plasma membrane 57.83 57.48
CDY05216 Canola plasma membrane 56.02 55.36
CDY27726 Canola golgi, plasma membrane, vacuole 55.82 55.16
CDY18836 Canola plasma membrane 56.02 55.03
GSMUA_Achr9P11150_001 Banana plasma membrane 56.22 55.01
CDX74116 Canola plasma membrane 55.82 54.72
CDY49992 Canola golgi, plasma membrane, vacuole 55.62 54.53
CDY62956 Canola cytosol 4.42 53.66
TraesCS1A01G341100.1 Wheat plasma membrane 54.82 53.42
GSMUA_Achr11P... Banana plasma membrane 54.42 53.35
TraesCS1D01G343200.1 Wheat plasma membrane 54.42 53.03
TraesCS1B01G353800.1 Wheat plasma membrane 54.22 52.84
EER98187 Sorghum plasma membrane 54.22 52.73
CDY68476 Canola plasma membrane 11.24 50.91
Zm00001d019138_P001 Maize plasma membrane 52.21 50.68
CDY67102 Canola cytosol, plasma membrane, vacuole 50.6 50.1
CDY33434 Canola plasma membrane 51.2 49.9
CDY33432 Canola plasma membrane 51.2 49.9
CDY66084 Canola golgi, plasma membrane, vacuole 36.95 49.86
CDY02218 Canola plasma membrane 43.17 49.77
CDY53930 Canola golgi, plasma membrane, vacuole 51.2 49.42
CDY22788 Canola golgi, plasma membrane, vacuole 51.2 49.42
CDY42509 Canola golgi, plasma membrane, vacuole 51.2 49.42
CDY33433 Canola cytosol, peroxisome, plasma membrane 29.32 49.32
CDX79066 Canola plasma membrane 50.8 49.32
CDX80558 Canola plasma membrane 50.2 49.31
CDY45759 Canola plasma membrane 51.61 49.23
CDY62955 Canola extracellular, plasma membrane 20.48 49.04
CDY29325 Canola golgi, plasma membrane, vacuole 50.8 49.03
CDX82827 Canola golgi, plasma membrane, vacuole 50.4 48.93
HORVU1Hr1G075970.1 Barley peroxisome, plasma membrane 54.02 48.82
CDY19773 Canola plasma membrane 52.01 48.68
CDY22024 Canola plasma membrane 49.6 48.62
CDX87052 Canola peroxisome, plasma membrane, vacuole 51.81 48.5
CDY62952 Canola golgi, plasma membrane, vacuole 51.2 48.48
CDY07098 Canola plasma membrane 49.4 48.43
CDX90958 Canola plasma membrane 49.8 48.34
GSMUA_Achr11P... Banana plasma membrane 52.41 47.89
CDY36072 Canola plasma membrane 40.96 47.55
CDY34842 Canola plasma membrane 49.6 47.41
CDX82272 Canola plasma membrane 40.76 47.32
CDX97945 Canola plasma membrane 49.2 46.93
CDY19352 Canola plasma membrane 49.2 46.93
CDY25359 Canola plasma membrane 40.36 46.85
CDY33431 Canola plasma membrane 40.16 46.62
CDY62951 Canola plasma membrane 40.56 46.44
CDY38688 Canola plasma membrane 39.96 46.17
CDY24593 Canola plasma membrane 40.36 45.68
CDY26777 Canola plasma membrane 41.16 44.57
CDY23062 Canola golgi, plasma membrane, vacuole 38.15 44.5
CDY47467 Canola plasma membrane 43.37 43.99
CDY34655 Canola plasma membrane 49.2 43.99
CDX87534 Canola plasma membrane 42.37 43.87
CDY02138 Canola golgi, plasma membrane, vacuole 37.55 43.79
CDY66862 Canola plasma membrane 43.78 43.08
CDX91766 Canola golgi, plasma membrane, vacuole 43.57 43.06
CDX88350 Canola plasma membrane 43.78 42.66
CDX91815 Canola plasma membrane 49.8 29.52
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6GO:A0A078DBU3EnsemblPlants:CDX86492ProteinID:CDX86492ProteinID:CDX86492.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00145089001InterPro:IPR020846InterPro:MFS_dom
InterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PRINTS:PR00171ScanProsite:PS00216PFscan:PS50850
PANTHER:PTHR23500PANTHER:PTHR23500:SF91SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879
TMHMM:TMhelixUniParc:UPI0004EC131ESEG:seg:::
Description
BnaC08g02110D
Coordinates
chrLK031846:-:117096..119377
Molecular Weight (calculated)
55482.9 Da
IEP (calculated)
9.441
GRAVY (calculated)
0.501
Length
498 amino acids
Sequence
(BLAST)
001: MVMGVMNIEE GASLPAKNTF QVFMCSIIAA VGGLMFGYDI GISGGVTSMD TFLIKFFHHV YEKKHRVHEN NYCKFDDQLL QLFTSSLYLA GIFASLAASY
101: LSRRFGRKPI IMSASAFFLC GAILNFFAQE LGMLIGGRIL LGCGIGFGNQ TVPLFISEIA PARIRGGLNL MFQFLITIGI LAASYVNFLT STVKDGWRYS
201: LGGAAVPALI LLIGSFFIHE TPASLIERGK DEEGKRVLRK IRGLEDIELE FNEIKRATEI SNKVKSPFKE LFTKSENRPP LVCGTLLQFF QQFTGINVVM
301: FYAPVLFQTM GSGNNASLIS TVVTNGVNAV ATIIAVVMVD RLGRRFFLVE GATQMTATQI SIGALLLKHL HLIGPITSRS VPLIVLILIC IYVSGFAWSW
401: GPLGWLVPSE IYPLEVRNAG YFCAVAMNMV CTFVIGQFFL SALCRFRSGL FFFFAVMNVI MGLFVIFFLP ETKGVPIEDM AEQRWKKHWH WRKYFKQN
Best Arabidopsis Sequence Match ( AT1G07340.1 )
(BLAST)
001: MAVGSMNVEE GTKAFPAKLT GQVFLCCVIA AVGGLMFGYD IGISGGVTSM DTFLLDFFPH VYEKKHRVHE NNYCKFDDQL LQLFTSSLYL AGIFASFISS
101: YVSRAFGRKP TIMLASIFFL VGAILNLSAQ ELGMLIGGRI LLGFGIGFGN QTVPLFISEI APARYRGGLN VMFQFLITIG ILAASYVNYL TSTLKNGWRY
201: SLGGAAVPAL ILLIGSFFIH ETPASLIERG KDEKGKQVLR KIRGIEDIEL EFNEIKYATE VATKVKSPFK ELFTKSENRP PLVCGTLLQF FQQFTGINVV
301: MFYAPVLFQT MGSGDNASLI STVVTNGVNA IATVISLLVV DFAGRRCLLM EGALQMTATQ MTIGGILLAH LKLVGPITGH AVPLIVLILI CVYVSGFAWS
401: WGPLGWLVPS EIYPLEVRNA GYFCAVAMNM VCTFIIGQFF LSALCRFRSL LFFFFGIMNI IMGLFVVFFL PETKGVPIEE MAEKRWKTHP RWKKYFKD
Arabidopsis Description
STP2STP2 [Source:UniProtKB/TrEMBL;Acc:A0A178W5X1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.