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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 2
  • golgi 3
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:golgi
Predotar:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra020794.1-P Field mustard golgi, plasma membrane, vacuole 99.6 99.6
CDY27726 Canola golgi, plasma membrane, vacuole 99.6 99.6
CDY18836 Canola plasma membrane 93.45 92.9
AT3G05960.1 Thale cress plasma membrane 92.86 92.31
CDY49992 Canola golgi, plasma membrane, vacuole 90.48 89.76
CDX74116 Canola plasma membrane 90.08 89.37
CDY52634 Canola plasma membrane 81.55 82.04
CDX88227 Canola plasma membrane 80.56 81.36
GSMUA_Achr9P11150_001 Banana plasma membrane 66.07 65.42
GSMUA_Achr11P... Banana plasma membrane 65.87 65.35
TraesCS1D01G343200.1 Wheat plasma membrane 61.9 61.06
TraesCS1A01G341100.1 Wheat plasma membrane 61.9 61.06
TraesCS1B01G353800.1 Wheat plasma membrane 61.51 60.67
EER98187 Sorghum plasma membrane 61.11 60.16
Zm00001d019138_P001 Maize plasma membrane 60.32 59.26
CDY67102 Canola cytosol, plasma membrane, vacuole 57.94 58.05
GSMUA_Achr11P... Banana plasma membrane 62.1 57.43
CDX80558 Canola plasma membrane 57.34 57.0
HORVU1Hr1G075970.1 Barley peroxisome, plasma membrane 62.1 56.81
CDY10269 Canola plasma membrane 56.15 56.71
CDY06700 Canola plasma membrane 55.95 56.51
CDY68476 Canola plasma membrane 12.3 56.36
CDY19773 Canola plasma membrane 59.33 56.2
CDX86492 Canola plasma membrane 55.36 56.02
CDX87052 Canola peroxisome, plasma membrane, vacuole 59.13 56.02
CDY15608 Canola plasma membrane 54.96 55.62
CDY62955 Canola extracellular, plasma membrane 22.62 54.81
CDY53930 Canola golgi, plasma membrane, vacuole 53.97 52.71
CDY29325 Canola golgi, plasma membrane, vacuole 53.97 52.71
CDY22024 Canola plasma membrane 52.78 52.36
CDY07098 Canola plasma membrane 52.78 52.36
CDX90958 Canola plasma membrane 52.98 52.05
CDY66084 Canola golgi, plasma membrane, vacuole 38.1 52.03
CDY42509 Canola golgi, plasma membrane, vacuole 53.17 51.94
CDY22788 Canola golgi, plasma membrane, vacuole 53.17 51.94
CDY33432 Canola plasma membrane 52.58 51.86
CDY33434 Canola plasma membrane 52.58 51.86
CDX82272 Canola plasma membrane 43.06 50.58
CDY33433 Canola cytosol, peroxisome, plasma membrane 29.56 50.34
CDY62952 Canola golgi, plasma membrane, vacuole 52.38 50.19
CDY33431 Canola plasma membrane 42.66 50.12
CDY36072 Canola plasma membrane 42.66 50.12
CDY62951 Canola plasma membrane 43.25 50.11
CDX79066 Canola plasma membrane 50.99 50.1
CDX82827 Canola golgi, plasma membrane, vacuole 50.79 49.9
CDY25359 Canola plasma membrane 42.46 49.88
CDY38688 Canola plasma membrane 42.46 49.65
CDX97945 Canola plasma membrane 51.39 49.62
CDY02218 Canola plasma membrane 42.46 49.54
CDY34842 Canola plasma membrane 51.19 49.52
CDY19352 Canola plasma membrane 50.79 49.04
CDY47467 Canola plasma membrane 47.42 48.68
CDY24593 Canola plasma membrane 42.46 48.64
CDY26777 Canola plasma membrane 44.25 48.48
CDY45759 Canola plasma membrane 50.0 48.28
CDX87534 Canola plasma membrane 45.44 47.61
CDX88350 Canola plasma membrane 47.22 46.58
CDY34655 Canola plasma membrane 50.79 45.96
CDY66862 Canola plasma membrane 45.24 45.06
CDX91766 Canola golgi, plasma membrane, vacuole 44.64 44.64
CDY23062 Canola golgi, plasma membrane, vacuole 36.51 43.09
CDY02138 Canola golgi, plasma membrane, vacuole 36.31 42.86
CDY62956 Canola cytosol 3.37 41.46
CDX91815 Canola plasma membrane 52.58 31.55
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6GO:A0A078EVD7EnsemblPlants:CDY05216ProteinID:CDY05216ProteinID:CDY05216.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00120025001InterPro:IPR020846InterPro:MFS_dom
InterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PRINTS:PR00171ScanProsite:PS00217PFscan:PS50850
PANTHER:PTHR23500PANTHER:PTHR23500:SF77SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879
TMHMM:TMhelixUniParc:UPI0004EDC49BSEG:seg:::
Description
BnaC05g45870D
Coordinates
chrLK031960:-:396182..398330
Molecular Weight (calculated)
55579.9 Da
IEP (calculated)
8.134
GRAVY (calculated)
0.653
Length
504 amino acids
Sequence
(BLAST)
001: MAVVVTSNGN APAFEAKLTV YVFICVVIAA FGGLIFGYDI GISGGVTAMD DFLKEFFPAV WERKKHAHEN NYCKYDNQFL QLFTSSLYLA ALVASFFASA
101: VCSKLGRKPT MQFASIFFLI GVGLTAGAVN LIMLIFGRIL LGFGVGFGNQ AVPLFLSEIA PAQLRGGLNI VFQLMVTIGI LIANLVNYFT AKVHPYGWRI
201: ALGGAAIPAV FLLFGSLIIC ETPTSLIERN KNEEGKEALR KIRGVEDINE EYESIVHACD IASQVKDPFR KLLKPASRPP FVIGMLLQLF QQFTGINAIM
301: FYAPVLFQTV GFGSEAALLS AVITGTINVL STFVGIYLVD KTGRRFLLLQ SSVHMLICQL IIGIILAKDL GTTGTLGKPQ ALVVVIFVCV YVMGFAWSWG
401: PLGWLIPSET FPLETRSAGF AVAVSCNMFF TFVIAQAFLS MLCGMRSGIF FFFSAWIVVM GLFAMFFIPE TKGVAIDDMR ESVWKPHWFW KRYMLDEDDV
501: EKRN
Best Arabidopsis Sequence Match ( AT3G05960.1 )
(BLAST)
001: MAVVVSNANA PAFEAKMTVY VFICVMIAAV GGLIFGYDIG ISGGVSAMDD FLKEFFPAVW ERKKHVHENN YCKYDNQFLQ LFTSSLYLAA LVASFVASAT
101: CSKLGRRPTM QFASIFFLIG VGLTAGAVNL VMLIIGRLFL GFGVGFGNQA VPLFLSEIAP AQLRGGLNIV FQLMVTIGIL IANIVNYFTA TVHPYGWRIA
201: LGGAGIPAVI LLFGSLLIIE TPTSLIERNK NEEGKEALRK IRGVDDINDE YESIVHACDI ASQVKDPYRK LLKPASRPPF IIGMLLQLFQ QFTGINAIMF
301: YAPVLFQTVG FGSDAALLSA VITGSINVLA TFVGIYLVDR TGRRFLLLQS SVHMLICQLI IGIILAKDLG VTGTLGRPQA LVVVIFVCVY VMGFAWSWGP
401: LGWLIPSETF PLETRSAGFA VAVSCNMFFT FVIAQAFLSM LCGMRSGIFF FFSGWIIVMG LFAFFFIPET KGIAIDDMRE SVWKPHWFWK RYMLPEDDHH
501: DIEKRNA
Arabidopsis Description
STP6Sugar transport protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFG0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.