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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • peroxisome 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra036575.1-P Field mustard peroxisome, plasma membrane, vacuole 99.81 99.81
CDX87052 Canola peroxisome, plasma membrane, vacuole 99.62 99.62
AT5G26340.1 Thale cress plasma membrane 94.17 95.25
CDY67102 Canola cytosol, plasma membrane, vacuole 84.77 89.66
CDX80558 Canola plasma membrane 84.59 88.76
KRH77866 Soybean peroxisome, plasma membrane, vacuole 82.71 84.29
KRH27626 Soybean peroxisome, plasma membrane, vacuole 81.77 83.33
Solyc09g075820.2.1 Tomato nucleus 81.58 82.98
PGSC0003DMT400081426 Potato mitochondrion 80.83 82.22
VIT_05s0020g03140.t01 Wine grape plasma membrane 82.71 82.09
TraesCS4D01G243100.1 Wheat plasma membrane 78.95 81.71
TraesCS4B01G243500.1 Wheat plasma membrane 78.95 81.71
Zm00001d028230_P001 Maize plasma membrane 78.76 81.52
EER92634 Sorghum plasma membrane 79.14 81.43
Os03t0218400-01 Rice plasma membrane 78.76 81.36
TraesCS4A01G066200.1 Wheat plasma membrane 78.38 80.97
GSMUA_Achr4P03620_001 Banana plasma membrane 72.37 79.06
GSMUA_Achr7P27070_001 Banana plasma membrane 71.24 78.96
KRH35542 Soybean plasma membrane 68.61 76.84
KRG91268 Soybean plasma membrane 72.56 75.39
KRH35541 Soybean peroxisome, plasma membrane, vacuole 69.17 73.6
TraesCS6B01G384700.1 Wheat plasma membrane 67.67 68.57
TraesCS6A01G351600.1 Wheat cytosol, peroxisome, plasma membrane 46.24 68.52
CDY07098 Canola plasma membrane 59.21 62.01
CDY22024 Canola plasma membrane 58.46 61.22
HORVU6Hr1G084290.24 Barley golgi, plasma membrane 64.29 61.07
CDX90958 Canola plasma membrane 58.65 60.82
CDX88227 Canola plasma membrane 56.2 59.92
CDY52634 Canola plasma membrane 56.39 59.88
CDY05216 Canola plasma membrane 56.2 59.33
CDY27726 Canola golgi, plasma membrane, vacuole 56.02 59.13
CDY18836 Canola plasma membrane 55.64 58.38
CDY49992 Canola golgi, plasma membrane, vacuole 55.64 58.27
CDX82827 Canola golgi, plasma membrane, vacuole 56.02 58.09
CDX74116 Canola plasma membrane 55.45 58.07
CDX97945 Canola plasma membrane 56.58 57.66
CDX79066 Canola plasma membrane 55.26 57.31
CDY34842 Canola plasma membrane 56.02 57.2
CDY19352 Canola plasma membrane 56.02 57.09
CDY66084 Canola golgi, plasma membrane, vacuole 39.29 56.64
CDX87534 Canola plasma membrane 50.94 56.34
CDY62955 Canola extracellular, plasma membrane 21.99 56.25
CDY45759 Canola plasma membrane 54.51 55.56
CDY29325 Canola golgi, plasma membrane, vacuole 53.76 55.43
CDY53930 Canola golgi, plasma membrane, vacuole 53.76 55.43
CDY02218 Canola plasma membrane 44.74 55.09
CDY33434 Canola plasma membrane 52.63 54.79
CDY33432 Canola plasma membrane 52.44 54.6
CDY22788 Canola golgi, plasma membrane, vacuole 52.82 54.46
CDY42509 Canola golgi, plasma membrane, vacuole 52.82 54.46
CDY26777 Canola plasma membrane 46.99 54.35
CDX88350 Canola plasma membrane 52.07 54.21
CDY47467 Canola plasma membrane 49.62 53.77
CDY33431 Canola plasma membrane 43.23 53.61
CDY62951 Canola plasma membrane 43.8 53.56
CDX82272 Canola plasma membrane 43.05 53.38
CDY33433 Canola cytosol, peroxisome, plasma membrane 29.7 53.38
CDY34655 Canola plasma membrane 55.83 53.32
CDY38688 Canola plasma membrane 43.05 53.13
CDY25359 Canola plasma membrane 42.67 52.91
CDY36072 Canola plasma membrane 42.67 52.91
CDY68476 Canola plasma membrane 10.9 52.73
CDY62952 Canola golgi, plasma membrane, vacuole 52.07 52.66
CDY06700 Canola plasma membrane 49.06 52.3
CDY10269 Canola plasma membrane 48.87 52.1
CDX86492 Canola plasma membrane 48.68 52.01
CDY15608 Canola plasma membrane 48.31 51.61
CDY24593 Canola plasma membrane 42.67 51.59
CDY66862 Canola plasma membrane 47.74 50.2
CDX91766 Canola golgi, plasma membrane, vacuole 47.18 49.8
CDY23062 Canola golgi, plasma membrane, vacuole 38.53 48.01
CDY02138 Canola golgi, plasma membrane, vacuole 38.53 48.01
CDY62956 Canola cytosol 3.57 46.34
CDX91815 Canola plasma membrane 58.08 36.79
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6GO:A0A078G4Y0UniProt:A0A078G4Y0EnsemblPlants:CDY19773ProteinID:CDY19773
ProteinID:CDY19773.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00009520001InterPro:IPR020846
InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PRINTS:PR00171ScanProsite:PS00216
PFscan:PS50850PANTHER:PTHR23500PANTHER:PTHR23500:SF70SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CS
TIGRFAMs:TIGR00879TMHMM:TMhelixUniParc:UPI0004EED4F6SEG:seg::
Description
BnaA09g04260DBnaA09g04260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G4Y0]
Coordinates
chrLK032100:+:300196..303881
Molecular Weight (calculated)
58024.5 Da
IEP (calculated)
9.578
GRAVY (calculated)
0.489
Length
532 amino acids
Sequence
(BLAST)
001: MAGGGFATAT ANGVEFEAKI TPIVIISCIM AATGGLMFGY DVGVSGGVTS MPDFLKKFFP VVHRKVEAGA DKNSNYCKYD NQGLQLFTSS LYLAGLTATF
101: FASYTTRTLG RRPTMLIAGV FFIIGVVLNA AAQDLAMLIA GRILLGCGVG FANQAVPLFL SEIAPTKIRG GLNILFQLNV TIGILFANLV NYGTAKIKGG
201: WGWRLSLGLA GVPALLLTVG ALLVTETPNS LVERGRLDEG KAVLRKIRGT DNVEPEFADL LEASRLAKEV KHPFRNLLQR RNRPQLVIAV ALQIFQQCTG
301: INAIMFYAPV LFSTLGFGND AALYSAVVTG AVNVLSTLVS IYSVDKVGRR VLLLEAGVQM FFSQVVIAII LGIKVTDHSQ NLSKGFAILV VVMICTYVAA
401: FAWSWGPLGW LIPSETFPLE TRSAGQSVTV CVNLLFTFII AQAFLSMLCH FKFGIFIFFS SWVLVMSFFV MFLLPETKNI PIEEMTERVW KKHWFWARFM
501: DDHHDDQVFA SGHVNGKKSN GKSNGFDPST RL
Best Arabidopsis Sequence Match ( AT5G26340.1 )
(BLAST)
001: MTGGGFATSA NGVEFEAKIT PIVIISCIMA ATGGLMFGYD VGVSGGVTSM PDFLEKFFPV VYRKVVAGAD KDSNYCKYDN QGLQLFTSSL YLAGLTATFF
101: ASYTTRTLGR RLTMLIAGVF FIIGVALNAG AQDLAMLIAG RILLGCGVGF ANQAVPLFLS EIAPTRIRGG LNILFQLNVT IGILFANLVN YGTAKIKGGW
201: GWRLSLGLAG IPALLLTVGA LLVTETPNSL VERGRLDEGK AVLRRIRGTD NVEPEFADLL EASRLAKEVK HPFRNLLQRR NRPQLVIAVA LQIFQQCTGI
301: NAIMFYAPVL FSTLGFGSDA SLYSAVVTGA VNVLSTLVSI YSVDKVGRRV LLLEAGVQMF FSQVVIAIIL GVKVTDTSTN LSKGFAILVV VMICTYVAAF
401: AWSWGPLGWL IPSETFPLET RSAGQSVTVC VNLLFTFIIA QAFLSMLCHF KFGIFIFFSA WVLIMSVFVM FLLPETKNIP IEEMTERVWK KHWFWARFMD
501: DHNDHEFVNG EKSNGKSNGF DPSTRL
Arabidopsis Description
STP13STP13 [Source:UniProtKB/TrEMBL;Acc:A0A178UHA7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.