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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • nucleus 1
  • plastid 2
  • golgi 2
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:plastid
iPSORT:plastid
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra018841.1-P Field mustard golgi, plasma membrane, vacuole 100.0 100.0
CDY22788 Canola golgi, plasma membrane, vacuole 100.0 100.0
CDY53930 Canola golgi, plasma membrane, vacuole 95.54 95.54
CDY29325 Canola golgi, plasma membrane, vacuole 94.96 94.96
AT1G50310.1 Thale cress plasma membrane 93.41 93.23
CDY62955 Canola extracellular, plasma membrane 34.5 85.58
CDY33433 Canola cytosol, peroxisome, plasma membrane 48.45 84.46
CDY33432 Canola plasma membrane 82.75 83.56
CDY33434 Canola plasma membrane 82.56 83.37
CDY66084 Canola golgi, plasma membrane, vacuole 57.75 80.76
CDY62952 Canola golgi, plasma membrane, vacuole 82.17 80.61
CDY68476 Canola plasma membrane 16.86 79.09
CDY62956 Canola cytosol 6.2 78.05
CDY02218 Canola plasma membrane 58.33 69.68
CDY45759 Canola plasma membrane 69.57 68.77
KRH40901 Soybean plasma membrane 68.02 68.55
KRH40905 Soybean plasma membrane 67.83 68.36
KRG90624 Soybean plasma membrane 67.05 67.71
KRH36130 Soybean plasma membrane 65.89 66.54
Solyc01g008240.2.1 Tomato peroxisome, plasma membrane, vacuole 65.12 66.53
PGSC0003DMT400042165 Potato peroxisome, plasma membrane, vacuole 64.92 66.21
Os07t0106200-02 Rice plasma membrane 66.09 65.83
EER97830 Sorghum plasma membrane 66.28 65.77
Zm00001d018627_P001 Maize plasma membrane 66.28 65.39
TraesCS2A01G259500.1 Wheat plasma membrane 65.31 65.18
TraesCS2B01G282400.1 Wheat plasma membrane 65.31 65.18
TraesCS2D01G264200.1 Wheat plasma membrane 65.31 65.18
TraesCS2A01G205500.1 Wheat plasma membrane 64.34 63.12
Zm00001d021775_P001 Maize plasma membrane 63.95 62.98
TraesCS2B01G232900.1 Wheat plasma membrane 63.76 62.55
CDY62951 Canola plasma membrane 52.52 62.3
CDY25359 Canola plasma membrane 51.74 62.24
Os07t0559700-00 Rice plasma membrane 63.76 62.08
TraesCS3D01G470200.1 Wheat plasma membrane 61.82 62.06
CDY33431 Canola plasma membrane 51.55 62.0
CDY36072 Canola plasma membrane 51.55 62.0
HORVU2Hr1G041080.6 Barley plasma membrane 63.76 61.96
TraesCS3B01G518900.1 Wheat plasma membrane 61.63 61.87
CDX82272 Canola plasma membrane 51.36 61.77
HORVU3Hr1G102860.5 Barley plasma membrane 62.02 61.66
CDY38688 Canola plasma membrane 51.36 61.48
EER99540 Sorghum golgi, plasma membrane, vacuole 63.18 61.39
Zm00001d049467_P001 Maize plasma membrane 60.47 60.7
Os08t0178200-02 Rice golgi, plasma membrane, plastid, vacuole 61.05 60.69
CDY24593 Canola plasma membrane 51.74 60.68
TraesCS7D01G286600.1 Wheat plastid 60.08 60.67
TraesCS3B01G518800.1 Wheat plasma membrane 59.69 60.63
GSMUA_Achr2P10700_001 Banana golgi, plasma membrane, vacuole 56.2 60.54
TraesCS7A01G288800.1 Wheat plastid 59.88 60.47
TraesCS7B01G185800.1 Wheat plastid 59.88 60.47
TraesCS3D01G470300.1 Wheat plasma membrane 59.5 60.43
TraesCS3A01G475200.1 Wheat plasma membrane 59.11 60.04
CDX82827 Canola golgi, plasma membrane, vacuole 59.69 60.04
CDY34842 Canola plasma membrane 60.47 59.88
CDX97945 Canola plasma membrane 60.47 59.77
CDY19352 Canola plasma membrane 60.47 59.77
EES13444 Sorghum plasma membrane 60.27 59.69
OQU85892 Sorghum plasma membrane 60.47 59.66
CDX79066 Canola plasma membrane 59.3 59.65
TraesCS3A01G475400.1 Wheat peroxisome 31.98 59.14
Os01t0567500-01 Rice plasma membrane 58.72 59.06
HORVU5Hr1G054140.1 Barley golgi, mitochondrion, plastid 59.88 58.63
GSMUA_Achr4P29880_001 Banana plasma membrane 55.04 58.56
EES03141 Sorghum golgi, plasma membrane, vacuole 57.56 58.35
HORVU3Hr1G102840.5 Barley plasma membrane 59.5 58.14
HORVU7Hr1G069030.1 Barley plasma membrane 60.08 58.05
Zm00001d032409_P001 Maize plasma membrane 60.27 58.02
Os01t0567600-00 Rice plasma membrane 57.56 58.01
Zm00001d044245_P001 Maize plasma membrane 57.17 57.96
Os09t0297300-00 Rice plasma membrane 58.33 57.55
TraesCS5A01G001100.1 Wheat golgi, plasma membrane, vacuole 56.98 56.98
Zm00001d007078_P001 Maize golgi, plasma membrane, vacuole 54.07 56.94
TraesCS5B01G001000.1 Wheat golgi, plasma membrane, vacuole 56.98 56.87
EER93920 Sorghum golgi, plasma membrane, vacuole 58.72 56.85
TraesCS5D01G001600.1 Wheat golgi, plasma membrane, vacuole 56.78 56.67
HORVU5Hr1G000380.1 Barley golgi, plasma membrane 56.4 56.07
Os03t0594400-01 Rice plasma membrane 56.59 55.94
CDY34655 Canola plasma membrane 60.08 55.66
CDX90958 Canola plasma membrane 54.46 54.78
CDY07098 Canola plasma membrane 53.88 54.72
CDY22024 Canola plasma membrane 53.88 54.72
CDY18836 Canola plasma membrane 52.91 53.85
CDY49992 Canola golgi, plasma membrane, vacuole 52.52 53.35
CDY67102 Canola cytosol, plasma membrane, vacuole 51.94 53.28
CDY05216 Canola plasma membrane 51.94 53.17
CDX88227 Canola plasma membrane 51.36 53.11
CDY27726 Canola golgi, plasma membrane, vacuole 51.74 52.98
CDY19773 Canola plasma membrane 54.46 52.82
CDX74116 Canola plasma membrane 51.94 52.76
CDY52634 Canola plasma membrane 50.97 52.49
CDX80558 Canola plasma membrane 51.55 52.47
CDX87052 Canola peroxisome, plasma membrane, vacuole 54.07 52.44
TraesCS6D01G123300.1 Wheat plasma membrane 53.1 52.39
TraesCS6B01G162200.1 Wheat plasma membrane 52.91 52.2
Os02t0160400-01 Rice plasma membrane 52.33 51.92
HORVU6Hr1G025520.1 Barley plasma membrane 52.33 51.63
TraesCS6A01G134000.1 Wheat plasma membrane 52.33 51.63
CDY10269 Canola plasma membrane 49.81 51.5
CDX86492 Canola plasma membrane 49.42 51.2
CDY06700 Canola plasma membrane 49.42 51.1
EES04558 Sorghum plasma membrane 51.55 51.06
CDX87534 Canola plasma membrane 47.48 50.94
CDY15608 Canola plasma membrane 49.03 50.8
CDY47467 Canola plasma membrane 47.67 50.1
CDY26777 Canola plasma membrane 44.38 49.78
CDY66862 Canola plasma membrane 48.64 49.6
CDX88350 Canola plasma membrane 48.84 49.32
CDX91766 Canola golgi, plasma membrane, vacuole 48.06 49.21
CDY02138 Canola golgi, plasma membrane, vacuole 40.5 48.95
CDY23062 Canola golgi, plasma membrane, vacuole 40.31 48.71
Zm00001d053846_P001 Maize plasma membrane 51.16 47.91
HORVU2Hr1G064160.1 Barley peroxisome 49.22 47.57
CDX91815 Canola plasma membrane 54.84 33.69
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6GO:A0A078HYX0UniProt:A0A078HYX0ProteinID:CDY22788.1EnsemblPlants:CDY42509
ProteinID:CDY42509ProteinID:CDY42509.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00074958001
InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PRINTS:PR00171
ScanProsite:PS00216ScanProsite:PS00217PFscan:PS50850PANTHER:PTHR23500PANTHER:PTHR23500:SF357SUPFAM:SSF103473
InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879TMHMM:TMhelixUniParc:UPI00019AA883SEG:seg
Description
BnaC06g03490DBnaA06g02890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HYX0]
Coordinates
chrLK032527:-:70455..73035
Molecular Weight (calculated)
56276.3 Da
IEP (calculated)
7.281
GRAVY (calculated)
0.531
Length
516 amino acids
Sequence
(BLAST)
001: MAGGAFVSEG SGGGSYEGGV TGFVIMTCIV AAMGGLLFGY DLGISGGVTS MEEFLSKFFP EVDRQMHNAR RETAYCKFDN QLLQLFTSSL YLAALVSSFA
101: ASAVTRKYGR KISMFVGGVA FLIGSLFNAF ATNVAMLIIG RLLLGVGVGF ANQSTPVYLS EMAPAKIRGA LNIGFQMAIT IGILIANLIN YGTSQMARNG
201: WRVSLGLAAV PAVVMVIGSF VLPDTPNSML ERGKYEQARE MLQKIRGADN VDEEFQDLCD ACESAKKVEH PWKNIFQEAK YRPALVFCSM IPFFQQFTGI
301: NVIMFYAPVL FKTLGFADDA SLISAVITGV VNVVSTLVSI YAVDRYGRRL LFLEGGIQMI ICQIIVGSLI GAKFGTTGSG TLTPATADWV LAFICIYVAG
401: FAWSWGPLGW LVPSEICPLE VRPAGQAINV SVNMFFTFLI GQFFLTMLCH MKFGLFYFFG GMVLIMTIFI YFLFPETKGV PIEEMGRVWK AHPFWKRYVP
501: DDAVIGGSGE TYVKEV
Best Arabidopsis Sequence Match ( AT1G50310.1 )
(BLAST)
001: MAGGAFVSEG GGGGNSYEGG VTVFVIMTCI VAAMGGLLFG YDLGISGGVT SMEEFLSKFF PEVDKQMHEA RRETAYCKFD NQLLQLFTSS LYLAALASSF
101: VASAVTRKYG RKISMFVGGV AFLIGSLFNA FATNVAMLIV GRLLLGVGVG FANQSTPVYL SEMAPAKIRG ALNIGFQMAI TIGILIANLI NYGTSQMAKN
201: GWRVSLGLAA VPAVIMVIGS FVLPDTPNSM LERGKYEQAR EMLQKIRGAD NVDEEFQDLC DACEAAKKVD NPWKNIFQQA KYRPALVFCS AIPFFQQITG
301: INVIMFYAPV LFKTLGFADD ASLISAVITG AVNVVSTLVS IYAVDRYGRR ILFLEGGIQM IVSQIVVGTL IGMKFGTTGS GTLTPATADW ILAFICLYVA
401: GFAWSWGPLG WLVPSEICPL EIRPAGQAIN VSVNMFFTFL IGQFFLTMLC HMKFGLFYFF GGMVAVMTVF IYFLLPETKG VPIEEMGRVW KQHPFWKRYM
501: PDDAVIGGGE ENYVKEV
Arabidopsis Description
STP9STP9 [Source:UniProtKB/TrEMBL;Acc:A0A178WN25]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.