Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G001600.1 | Wheat | golgi, plasma membrane, vacuole | 97.1 | 97.1 |
| TraesCS5A01G001100.1 | Wheat | golgi, plasma membrane, vacuole | 96.33 | 96.51 |
| HORVU5Hr1G000380.1 | Barley | golgi, plasma membrane | 95.74 | 95.38 |
| EES03141 | Sorghum | golgi, plasma membrane, vacuole | 83.75 | 85.07 |
| Zm00001d007078_P001 | Maize | golgi, plasma membrane, vacuole | 80.46 | 84.9 |
| Os01t0567500-01 | Rice | plasma membrane | 83.56 | 84.21 |
| Zm00001d044245_P001 | Maize | plasma membrane | 82.79 | 84.09 |
| Os01t0567600-00 | Rice | plasma membrane | 81.04 | 81.84 |
| GSMUA_Achr8P01450_001 | Banana | golgi, plasma membrane, plastid, vacuole | 61.32 | 65.77 |
| TraesCS2B01G232900.1 | Wheat | plasma membrane | 66.34 | 65.21 |
| TraesCS7B01G185800.1 | Wheat | plastid | 64.02 | 64.77 |
| TraesCS2B01G282400.1 | Wheat | plasma membrane | 63.64 | 63.64 |
| TraesCS3B01G518900.1 | Wheat | plasma membrane | 62.86 | 63.23 |
| TraesCS3B01G518800.1 | Wheat | plasma membrane | 61.7 | 62.8 |
| KRG90624 | Soybean | plasma membrane | 60.15 | 60.86 |
| KRH36130 | Soybean | plasma membrane | 59.96 | 60.67 |
| CDY68476 | Canola | plasma membrane | 12.77 | 60.0 |
| PGSC0003DMT400042165 | Potato | peroxisome, plasma membrane, vacuole | 58.22 | 59.49 |
| KRH40901 | Soybean | plasma membrane | 58.61 | 59.18 |
| CDY66084 | Canola | golgi, plasma membrane, vacuole | 42.17 | 59.08 |
| KRH40905 | Soybean | plasma membrane | 58.41 | 58.98 |
| Solyc01g008240.2.1 | Tomato | peroxisome, plasma membrane, vacuole | 57.45 | 58.81 |
| CDY29325 | Canola | golgi, plasma membrane, vacuole | 58.03 | 58.14 |
| Bra039642.1-P | Field mustard | golgi, plasma membrane, vacuole | 58.03 | 58.14 |
| CDY53930 | Canola | golgi, plasma membrane, vacuole | 58.03 | 58.14 |
| AT3G19940.1 | Thale cress | plasma membrane | 57.64 | 57.98 |
| Bra013029.1-P | Field mustard | golgi, plasma membrane, vacuole | 41.97 | 57.56 |
| AT1G50310.1 | Thale cress | plasma membrane | 57.25 | 57.25 |
| CDY02218 | Canola | plasma membrane | 47.78 | 57.18 |
| Bra038245.1-P | Field mustard | plasma membrane | 56.48 | 57.14 |
| Bra038243.1-P | Field mustard | plasma membrane | 56.48 | 57.14 |
| CDY33434 | Canola | plasma membrane | 56.48 | 57.14 |
| CDY33432 | Canola | plasma membrane | 56.48 | 57.14 |
| AT5G23270.1 | Thale cress | plasma membrane | 56.67 | 57.0 |
| CDY22788 | Canola | golgi, plasma membrane, vacuole | 56.87 | 56.98 |
| Bra018841.1-P | Field mustard | golgi, plasma membrane, vacuole | 56.87 | 56.98 |
| CDY42509 | Canola | golgi, plasma membrane, vacuole | 56.87 | 56.98 |
| TraesCS5B01G225100.1 | Wheat | plasma membrane | 57.06 | 56.73 |
| Bra001766.1-P | Field mustard | plasma membrane | 56.09 | 56.42 |
| CDY62955 | Canola | extracellular, plasma membrane | 22.63 | 56.25 |
| AT3G19930.1 | Thale cress | plasma membrane | 55.9 | 56.23 |
| CDY62956 | Canola | cytosol | 4.45 | 56.1 |
| CDY36072 | Canola | plasma membrane | 46.42 | 55.94 |
| CDY45759 | Canola | plasma membrane | 56.48 | 55.94 |
| CDX82272 | Canola | plasma membrane | 46.23 | 55.71 |
| CDY62951 | Canola | plasma membrane | 46.62 | 55.4 |
| Bra038242.1-P | Field mustard | plasma membrane | 54.93 | 55.25 |
| CDY25359 | Canola | plasma membrane | 45.84 | 55.24 |
| CDY33431 | Canola | plasma membrane | 45.84 | 55.24 |
| CDY62952 | Canola | golgi, plasma membrane, vacuole | 56.09 | 55.13 |
| CDY33433 | Canola | cytosol, peroxisome, plasma membrane | 31.53 | 55.07 |
| CDY38688 | Canola | plasma membrane | 45.65 | 54.76 |
| TraesCS4B01G243500.1 | Wheat | plasma membrane | 53.97 | 54.28 |
| CDY24593 | Canola | plasma membrane | 45.84 | 53.86 |
| Bra022468.1-P | Field mustard | plasma membrane | 50.29 | 53.83 |
| TraesCS6B01G162200.1 | Wheat | plasma membrane | 53.97 | 53.35 |
| TraesCS5B01G225300.1 | Wheat | plasma membrane | 52.22 | 52.63 |
| TraesCS6B01G384700.1 | Wheat | plasma membrane | 52.8 | 52.0 |
| TraesCS1B01G454800.1 | Wheat | golgi, plasma membrane, vacuole | 50.68 | 51.98 |
| TraesCS1B01G353800.1 | Wheat | plasma membrane | 51.26 | 51.86 |
| TraesCS3B01G120300.1 | Wheat | plasma membrane | 45.84 | 51.41 |
| TraesCS2B01G339100.1 | Wheat | peroxisome, plasma membrane, vacuole | 50.87 | 51.27 |
| TraesCS5B01G225400.1 | Wheat | plasma membrane | 52.22 | 51.14 |
| TraesCS1B01G232900.1 | Wheat | plasma membrane | 50.87 | 50.48 |
| TraesCS5B01G180800.1 | Wheat | plasma membrane | 50.29 | 49.24 |
| TraesCS2B01G338400.1 | Wheat | peroxisome, plasma membrane, vacuole | 48.55 | 49.22 |
| TraesCS2B01G338500.1 | Wheat | plasma membrane | 45.65 | 45.91 |
| TraesCS4B01G346400.1 | Wheat | plasma membrane | 45.84 | 45.84 |
| TraesCS4B01G371700.2 | Wheat | plasma membrane | 52.61 | 44.23 |
| TraesCS2B01G338600.1 | Wheat | plasma membrane | 38.88 | 43.98 |
| TraesCS2B01G338700.1 | Wheat | vacuole | 44.87 | 42.88 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.1.6 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR020846 |
| InterPro:MFS_dom | InterPro:MFS_sugar_transport-like | InterPro:MFS_trans_sf | PFAM:PF00083 | PRINTS:PR00171 | ScanProsite:PS00216 |
| ScanProsite:PS00217 | PFscan:PS50850 | PANTHER:PTHR23500 | PANTHER:PTHR23500:SF10 | SUPFAM:SSF103473 | InterPro:Sugar/inositol_transpt |
| InterPro:Sugar_transporter_CS | TIGRFAMs:TIGR00879 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5B01G001000 | EnsemblPlants:TraesCS5B01G001000.1 | TIGR:cd06174 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:762936..764892
Molecular Weight (calculated)
56052.8 Da
IEP (calculated)
9.178
GRAVY (calculated)
0.654
Length
517 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVTGGLGKS DGDKDYPGNM TVFVFLACLV ASSGGLIFGY DIGISGGVTS MDPFLIRFFP SVYAKEQEVV DTNQYCKFDS VLLTLFTSSL YLAALVASLF
101: ASVITRKLGR RATMLGGGVV FLVGAILNGF AMNIAMLIIG RILLGVGVGF SNQAVPLYLS EMAPAKMRGM LNISFQLMIT VGILAANLIN YFTAKISGGW
201: GWRISLGLAA VPAVIMAGGS LFLPDTPNSL VARGKGEEAR AMLRRIRGTH DIGLEYDDLV AASEASKAIE NPWKTLLERR YRPQLAMAIL IPTLQQLTGI
301: NVVMFYAPVL FKTIGFGGTA SLMSSVISGG VNMLATFVSI ATVDRLGRRK LLLEGGCQMI LAQIVLGTLI WIKFGTDGVA TISRSYAIGV VFCICVFVSA
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSMVV VCNMAFTFII AQIFLMMLCR LKFGLFYLFG ACELLMTAFV CFFLPETKGI PIEEMDRIWA THWYWKRFVE
501: GNGGRRNVQL TSSSSAV
101: ASVITRKLGR RATMLGGGVV FLVGAILNGF AMNIAMLIIG RILLGVGVGF SNQAVPLYLS EMAPAKMRGM LNISFQLMIT VGILAANLIN YFTAKISGGW
201: GWRISLGLAA VPAVIMAGGS LFLPDTPNSL VARGKGEEAR AMLRRIRGTH DIGLEYDDLV AASEASKAIE NPWKTLLERR YRPQLAMAIL IPTLQQLTGI
301: NVVMFYAPVL FKTIGFGGTA SLMSSVISGG VNMLATFVSI ATVDRLGRRK LLLEGGCQMI LAQIVLGTLI WIKFGTDGVA TISRSYAIGV VFCICVFVSA
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSMVV VCNMAFTFII AQIFLMMLCR LKFGLFYLFG ACELLMTAFV CFFLPETKGI PIEEMDRIWA THWYWKRFVE
501: GNGGRRNVQL TSSSSAV
001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV
Arabidopsis Description
STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.