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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • nucleus 1
  • plastid 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:golgi, nucleus, plasma membrane, vacuole
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra039642.1-P Field mustard golgi, plasma membrane, vacuole 99.61 99.61
CDY53930 Canola golgi, plasma membrane, vacuole 99.03 99.03
CDY22788 Canola golgi, plasma membrane, vacuole 94.96 94.96
CDY42509 Canola golgi, plasma membrane, vacuole 94.96 94.96
AT1G50310.1 Thale cress plasma membrane 92.44 92.26
CDY62955 Canola extracellular, plasma membrane 34.69 86.06
CDY33433 Canola cytosol, peroxisome, plasma membrane 48.84 85.14
CDY33432 Canola plasma membrane 83.91 84.74
CDY33434 Canola plasma membrane 83.72 84.54
CDY68476 Canola plasma membrane 17.64 82.73
CDY66084 Canola golgi, plasma membrane, vacuole 58.72 82.11
CDY62952 Canola golgi, plasma membrane, vacuole 83.33 81.75
CDY62956 Canola cytosol 6.2 78.05
CDY02218 Canola plasma membrane 59.3 70.83
CDY45759 Canola plasma membrane 69.96 69.16
KRH40901 Soybean plasma membrane 68.41 68.95
KRH40905 Soybean plasma membrane 68.22 68.75
KRG90624 Soybean plasma membrane 66.86 67.51
Solyc01g008240.2.1 Tomato peroxisome, plasma membrane, vacuole 65.89 67.33
KRH36130 Soybean plasma membrane 66.67 67.32
PGSC0003DMT400042165 Potato peroxisome, plasma membrane, vacuole 65.7 67.0
Os07t0106200-02 Rice plasma membrane 67.05 66.8
Zm00001d018627_P001 Maize plasma membrane 67.64 66.73
TraesCS2A01G259500.1 Wheat plasma membrane 66.67 66.54
TraesCS2B01G282400.1 Wheat plasma membrane 66.67 66.54
TraesCS2D01G264200.1 Wheat plasma membrane 66.67 66.54
EER97830 Sorghum plasma membrane 66.86 66.35
TraesCS2A01G205500.1 Wheat plasma membrane 65.12 63.88
TraesCS2B01G232900.1 Wheat plasma membrane 64.73 63.5
Os07t0559700-00 Rice plasma membrane 65.12 63.4
Zm00001d021775_P001 Maize plasma membrane 64.34 63.36
TraesCS3D01G470200.1 Wheat plasma membrane 62.6 62.84
HORVU2Hr1G041080.6 Barley plasma membrane 64.53 62.71
TraesCS3B01G518900.1 Wheat plasma membrane 62.4 62.65
HORVU3Hr1G102860.5 Barley plasma membrane 62.98 62.62
CDY62951 Canola plasma membrane 52.71 62.53
CDX82272 Canola plasma membrane 51.74 62.24
CDY25359 Canola plasma membrane 51.74 62.24
CDY33431 Canola plasma membrane 51.74 62.24
CDY36072 Canola plasma membrane 51.74 62.24
EER99540 Sorghum golgi, plasma membrane, vacuole 63.95 62.15
CDY38688 Canola plasma membrane 51.55 61.72
TraesCS3B01G518800.1 Wheat plasma membrane 60.47 61.42
TraesCS3D01G470300.1 Wheat plasma membrane 60.08 61.02
GSMUA_Achr2P10700_001 Banana golgi, plasma membrane, vacuole 56.59 60.96
CDY24593 Canola plasma membrane 51.94 60.91
CDX82827 Canola golgi, plasma membrane, vacuole 60.47 60.82
Os08t0178200-02 Rice golgi, plasma membrane, plastid, vacuole 61.05 60.69
TraesCS7D01G286600.1 Wheat plastid 60.08 60.67
TraesCS3A01G475200.1 Wheat plasma membrane 59.69 60.63
TraesCS7A01G288800.1 Wheat plastid 59.88 60.47
TraesCS7B01G185800.1 Wheat plastid 59.88 60.47
CDY34842 Canola plasma membrane 61.05 60.46
CDX79066 Canola plasma membrane 60.08 60.43
CDX97945 Canola plasma membrane 61.05 60.34
CDY19352 Canola plasma membrane 61.05 60.34
Zm00001d049467_P001 Maize plasma membrane 60.08 60.31
Os01t0567500-01 Rice plasma membrane 59.69 60.04
TraesCS3A01G475400.1 Wheat peroxisome 32.36 59.86
Os01t0567600-00 Rice plasma membrane 59.3 59.77
EES13444 Sorghum plasma membrane 60.27 59.69
OQU85892 Sorghum plasma membrane 60.27 59.46
EES03141 Sorghum golgi, plasma membrane, vacuole 58.33 59.14
Zm00001d044245_P001 Maize plasma membrane 58.33 59.14
GSMUA_Achr4P29880_001 Banana plasma membrane 55.23 58.76
Zm00001d032409_P001 Maize plasma membrane 60.85 58.58
HORVU3Hr1G102840.5 Barley plasma membrane 59.88 58.52
Zm00001d007078_P001 Maize golgi, plasma membrane, vacuole 55.23 58.16
HORVU7Hr1G069030.1 Barley plasma membrane 60.08 58.05
TraesCS5B01G001000.1 Wheat golgi, plasma membrane, vacuole 58.14 58.03
TraesCS5D01G001600.1 Wheat golgi, plasma membrane, vacuole 58.14 58.03
TraesCS5A01G001100.1 Wheat golgi, plasma membrane, vacuole 57.95 57.95
HORVU5Hr1G054140.1 Barley golgi, mitochondrion, plastid 59.11 57.87
HORVU5Hr1G000380.1 Barley golgi, plasma membrane 58.14 57.8
EER93920 Sorghum golgi, plasma membrane, vacuole 59.69 57.79
Os09t0297300-00 Rice plasma membrane 58.14 57.36
Os03t0594400-01 Rice plasma membrane 57.36 56.7
CDY22024 Canola plasma membrane 55.43 56.3
CDY34655 Canola plasma membrane 60.66 56.19
CDY07098 Canola plasma membrane 55.23 56.1
CDX90958 Canola plasma membrane 55.62 55.95
CDY18836 Canola plasma membrane 53.68 54.64
CDY67102 Canola cytosol, plasma membrane, vacuole 53.1 54.47
CDY05216 Canola plasma membrane 52.71 53.97
CDY27726 Canola golgi, plasma membrane, vacuole 52.71 53.97
CDY19773 Canola plasma membrane 55.43 53.76
CDY49992 Canola golgi, plasma membrane, vacuole 52.91 53.74
CDX80558 Canola plasma membrane 52.71 53.65
CDX87052 Canola peroxisome, plasma membrane, vacuole 55.04 53.38
CDX74116 Canola plasma membrane 52.33 53.15
CDX88227 Canola plasma membrane 51.36 53.11
CDY52634 Canola plasma membrane 51.16 52.69
Os02t0160400-01 Rice plasma membrane 52.52 52.12
TraesCS6D01G123300.1 Wheat plasma membrane 52.71 52.01
TraesCS6B01G162200.1 Wheat plasma membrane 52.52 51.82
EES04558 Sorghum plasma membrane 52.13 51.63
HORVU6Hr1G025520.1 Barley plasma membrane 52.33 51.63
TraesCS6A01G134000.1 Wheat plasma membrane 52.33 51.63
CDX87534 Canola plasma membrane 47.87 51.35
CDY10269 Canola plasma membrane 49.42 51.1
CDX86492 Canola plasma membrane 49.03 50.8
CDY06700 Canola plasma membrane 49.03 50.7
CDY47467 Canola plasma membrane 48.06 50.51
CDY15608 Canola plasma membrane 48.64 50.4
CDY66862 Canola plasma membrane 49.42 50.4
CDX91766 Canola golgi, plasma membrane, vacuole 48.84 50.0
CDY26777 Canola plasma membrane 44.38 49.78
CDX88350 Canola plasma membrane 49.22 49.71
CDY02138 Canola golgi, plasma membrane, vacuole 40.89 49.41
CDY23062 Canola golgi, plasma membrane, vacuole 40.7 49.18
Zm00001d053846_P001 Maize plasma membrane 52.13 48.82
HORVU2Hr1G064160.1 Barley peroxisome 50.39 48.69
CDX91815 Canola plasma membrane 55.62 34.17
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6GO:A0A078GS66UniProt:A0A078GS66EnsemblPlants:CDY29325ProteinID:CDY29325
ProteinID:CDY29325.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00042881001InterPro:IPR020846
InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PRINTS:PR00171ScanProsite:PS00216
ScanProsite:PS00217PFscan:PS50850PANTHER:PTHR23500PANTHER:PTHR23500:SF357SUPFAM:SSF103473InterPro:Sugar/inositol_transpt
InterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879TMHMM:TMhelixUniParc:UPI0004EDD423SEG:seg:
Description
BnaA05g15920DBnaA05g15920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GS66]
Coordinates
chrLK032235:-:84489..86949
Molecular Weight (calculated)
56105.2 Da
IEP (calculated)
7.281
GRAVY (calculated)
0.553
Length
516 amino acids
Sequence
(BLAST)
001: MAGGAFVSDG GGGGSYEGGV TGFVIITCIV AAMGGLLFGY DLGISGGVTS MEEFLSKFFP EVDRQMHNAK RETAYCKFDN QLLQLFTSSL YLAALVSSFA
101: ASVVTRKYGR KISMFVGGLS FLIGALINAF AVNVAMLIIG RLLLGVGVGF ANQSTPVYLS EMAPAKLRGA LNIGFQMAIT IGILIANLIN YGTSQMARNG
201: WRVSLGLAAV PAVVMVIGSF VLPDTPNSML ERGKYEQARE MLQKIRGADN VDEEFQDLCD ACEAAKKVEH PWKNLFLQAK YRPALAFCSA IPFFQQFTGI
301: NVIMFYAPVL FKTLGFADDA SLISAVITGV VNVVSTLVSI YAVDRYGRRI LFLEGGIQMI ICQIIVGSLI GAKFGTTGSG TLTPATADWV LAFICLYVAG
401: FAWSWGPLGW LVPSEICPLE IRPAGQAVNV SVNMFFTFLI GQFFLTMLCH MKFGLFYFFG GMVLIMTIFI YFLLPETKGV PIEEMGRVWK QHPFWKRYIP
501: DDAVIGGSEE TSVKEV
Best Arabidopsis Sequence Match ( AT1G50310.1 )
(BLAST)
001: MAGGAFVSEG GGGGNSYEGG VTVFVIMTCI VAAMGGLLFG YDLGISGGVT SMEEFLSKFF PEVDKQMHEA RRETAYCKFD NQLLQLFTSS LYLAALASSF
101: VASAVTRKYG RKISMFVGGV AFLIGSLFNA FATNVAMLIV GRLLLGVGVG FANQSTPVYL SEMAPAKIRG ALNIGFQMAI TIGILIANLI NYGTSQMAKN
201: GWRVSLGLAA VPAVIMVIGS FVLPDTPNSM LERGKYEQAR EMLQKIRGAD NVDEEFQDLC DACEAAKKVD NPWKNIFQQA KYRPALVFCS AIPFFQQITG
301: INVIMFYAPV LFKTLGFADD ASLISAVITG AVNVVSTLVS IYAVDRYGRR ILFLEGGIQM IVSQIVVGTL IGMKFGTTGS GTLTPATADW ILAFICLYVA
401: GFAWSWGPLG WLVPSEICPL EIRPAGQAIN VSVNMFFTFL IGQFFLTMLC HMKFGLFYFF GGMVAVMTVF IYFLLPETKG VPIEEMGRVW KQHPFWKRYM
501: PDDAVIGGGE ENYVKEV
Arabidopsis Description
STP9STP9 [Source:UniProtKB/TrEMBL;Acc:A0A178WN25]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.