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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • mitochondrion 1
  • golgi 2
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 plasma membrane: 28056797
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU6Hr1G025520.1 Barley plasma membrane 83.46 82.98
TraesCS6A01G134000.1 Wheat plasma membrane 82.88 82.41
TraesCS6B01G162200.1 Wheat plasma membrane 82.69 82.22
TraesCS6D01G123300.1 Wheat plasma membrane 82.5 82.03
EES04558 Sorghum plasma membrane 78.85 78.69
Zm00001d053846_P001 Maize plasma membrane 79.04 74.59
CDY62955 Canola extracellular, plasma membrane 22.69 56.73
GSMUA_Achr5P26540_001 Banana extracellular, plasma membrane, vacuole 48.85 56.7
Os01t0567500-01 Rice plasma membrane 55.58 56.34
Os08t0178200-02 Rice golgi, plasma membrane, plastid, vacuole 56.15 56.26
Os07t0106200-02 Rice plasma membrane 55.38 55.6
GSMUA_Achr11P... Banana plasma membrane 50.0 54.97
Os07t0559700-00 Rice plasma membrane 55.96 54.91
Os01t0567600-00 Rice plasma membrane 53.85 54.69
CDY33433 Canola cytosol, peroxisome, plasma membrane 30.96 54.39
GSMUA_Achr11P... Banana golgi, plasma membrane, plastid, vacuole 45.38 53.64
KRG90624 Soybean plasma membrane 52.5 53.42
CDY53930 Canola golgi, plasma membrane, vacuole 52.31 52.71
Bra039642.1-P Field mustard golgi, plasma membrane, vacuole 52.31 52.71
Os03t0594400-01 Rice plasma membrane 52.88 52.68
KRH36130 Soybean plasma membrane 51.73 52.64
AT3G19940.1 Thale cress plasma membrane 51.92 52.53
CDY29325 Canola golgi, plasma membrane, vacuole 52.12 52.52
CDY22788 Canola golgi, plasma membrane, vacuole 51.92 52.33
Bra018841.1-P Field mustard golgi, plasma membrane, vacuole 51.92 52.33
CDY42509 Canola golgi, plasma membrane, vacuole 51.92 52.33
CDY02218 Canola plasma membrane 43.46 52.31
KRH40901 Soybean plasma membrane 51.35 52.15
KRH40905 Soybean plasma membrane 51.15 51.95
AT5G23270.1 Thale cress plasma membrane 51.35 51.95
Solyc01g008240.2.1 Tomato peroxisome, plasma membrane, vacuole 50.38 51.88
PGSC0003DMT400042165 Potato peroxisome, plasma membrane, vacuole 50.38 51.78
AT1G50310.1 Thale cress plasma membrane 51.35 51.64
Bra038243.1-P Field mustard plasma membrane 50.38 51.27
CDY33432 Canola plasma membrane 50.38 51.27
Bra038245.1-P Field mustard plasma membrane 50.38 51.27
CDY33434 Canola plasma membrane 50.19 51.08
Os09t0297300-00 Rice plasma membrane 51.35 51.05
CDY45759 Canola plasma membrane 51.15 50.96
AT3G19930.1 Thale cress plasma membrane 49.42 50.0
CDY66084 Canola golgi, plasma membrane, vacuole 35.38 49.86
Bra001766.1-P Field mustard plasma membrane 49.23 49.81
CDY62952 Canola golgi, plasma membrane, vacuole 50.0 49.43
Bra038242.1-P Field mustard plasma membrane 48.85 49.42
GSMUA_Achr10P... Banana plasma membrane 47.69 49.3
Bra013029.1-P Field mustard golgi, plasma membrane, vacuole 35.58 49.07
CDY62951 Canola plasma membrane 40.96 48.97
CDY36072 Canola plasma membrane 40.38 48.95
CDX82272 Canola plasma membrane 40.19 48.72
CDY25359 Canola plasma membrane 40.19 48.72
CDY33431 Canola plasma membrane 40.0 48.48
CDY38688 Canola plasma membrane 39.81 48.03
Bra022468.1-P Field mustard plasma membrane 44.23 47.62
CDY24593 Canola plasma membrane 40.19 47.5
Os09t0416200-01 Rice plasma membrane 46.15 46.97
Os03t0218400-01 Rice plasma membrane 45.38 45.83
Os09t0268300-02 Rice plasma membrane 44.62 45.4
CDY68476 Canola plasma membrane 9.42 44.55
CDY62956 Canola cytosol 3.46 43.9
Os03t0101300-02 Rice plasma membrane 43.27 43.35
Os10t0561300-01 Rice plasma membrane 42.69 42.86
Os04t0452700-01 Rice plasma membrane 40.77 41.01
Os04t0453200-01 Rice golgi, plasma membrane, vacuole 39.62 40.63
Os11t0594000-01 Rice cytosol, mitochondrion, plasma membrane, vacuole 40.38 40.23
Os04t0453400-02 Rice plasma membrane 38.85 39.45
Os02t0573500-01 Rice plasma membrane 39.23 38.71
Os02t0574100-01 Rice cytosol, peroxisome, plasma membrane 37.88 38.03
Os04t0452600-00 Rice endoplasmic reticulum, plasma membrane, vacuole 32.88 35.77
Os04t0453300-00 Rice extracellular, golgi 11.15 33.33
Os03t0101500-01 Rice cytosol 0.38 0.77
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6EntrezGene:4328379EMBL:AK070615EMBL:AK119771ProteinID:BAD25203.1
ProteinID:BAD28051.1ProteinID:BAF07884.1ProteinID:BAS77104.1GO:GO:0003674GO:GO:0005215GO:GO:0005351
GO:GO:0005355GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0022857GO:GO:0046323GO:GO:0055085GO:GO:1902600InterPro:IPR020846InterPro:MFS_dom
InterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfEnsemblPlantsGene:Os02g0160400EnsemblPlants:Os02t0160400-01PFAM:PF00083PRINTS:PR00171
ScanProsite:PS00216ScanProsite:PS00217PFscan:PS50850PANTHER:PTHR23500PANTHER:PTHR23500:SF178UniProt:Q6H7U6
SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879TMHMM:TMhelixUniParc:UPI00003B43B4
RefSeq:XP_015625676.1SEG:seg::::
Description
Similar to Monosaccharide transporter 3. (Os02t0160400-01)
Coordinates
chr2:+:3266011..3268700
Molecular Weight (calculated)
56925.4 Da
IEP (calculated)
8.754
GRAVY (calculated)
0.689
Length
520 amino acids
Sequence
(BLAST)
001: MPGAVIVHHH TRYKTYPGEV TGFVFFCCLI ASVGGCIFGY DIGLTAGLTS TESFLAMFFP VIFEQQQERV ITNQYCKFDS QVLTLFGSSL FLSAMVAGIF
101: ASPMSRAFGR KWTLFVAAVA YLIGAILGAI SFNFIVLLTG RLLLGVGVGV CIHASPLYIS EMAPAQQRGM LNILFQLMIT VGILSASLTT YWTSKIAGGW
201: GWRVGLAFGT VPAAVIALGS LAIPDTPVSL IARGEGEAAR ATLAKIRGVD DVRAEFEDLT TASEESKAVA HPWRELFFGG RYKPQLAFAV LIPFFQQLTG
301: INVIMFYAPV LFKTVGFRQD ASLVSSVITG LVNVFSTFVA VMTADKVGRR ALFLQGGTQM IISQILVGTF IGLQFGVSGT GAMSEQYAMC IVLFVCVYVA
401: GFAWSWGPMG WLIPSEVYPL AVRSAAQSVT VAVNMFFTAF ISQIFLTLLC HLRFGLFYFF GAWVLLMTVF IATLLPETKC VPLEEVAHVW RKHWFWRKFI
501: VDSPDRGGAE MRKRIALEMS
Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)
001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV
Arabidopsis Description
STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.