Skip to main content
crop-pal logo
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 1
  • plasma membrane 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER96733 Sorghum mitochondrion, plasma membrane 90.61 89.38
TraesCS5A01G226500.1 Wheat plasma membrane 91.0 89.25
TraesCS5B01G225100.1 Wheat plasma membrane 90.61 89.04
TraesCS5D01G233900.1 Wheat plasma membrane 90.41 88.85
HORVU5Hr1G065630.4 Barley cytosol 90.02 88.46
Zm00001d020463_P002 Maize plasma membrane 90.02 87.95
TraesCS4A01G314900.1 Wheat plasma membrane 83.95 83.46
TraesCS5D01G234100.1 Wheat plasma membrane 83.95 82.5
TraesCS5A01G226700.1 Wheat plasma membrane 83.95 82.5
TraesCS5D01G549900.1 Wheat plasma membrane 82.97 82.49
TraesCS5B01G225300.1 Wheat plasma membrane 82.0 81.68
TraesCS5D01G558100.1 Wheat plasma membrane 80.04 81.15
TraesCS5D01G234200.1 Wheat plasma membrane 83.17 80.49
GSMUA_Achr9P13110_001 Banana plasma membrane 75.34 80.21
TraesCS5B01G225400.1 Wheat plasma membrane 82.78 80.11
TraesCS5A01G226800.1 Wheat plasma membrane 82.78 80.11
HORVU5Hr1G065660.1 Barley plasma membrane 83.17 79.14
CDY22024 Canola plasma membrane 76.91 77.36
Bra036297.1-P Field mustard plasma membrane 76.91 77.36
CDX90958 Canola plasma membrane 76.91 76.61
CDY07098 Canola plasma membrane 76.13 76.57
Bra000898.1-P Field mustard plasma membrane 76.71 76.41
AT4G02050.1 Thale cress plasma membrane 76.32 76.02
KRH12902 Soybean plasma membrane 74.95 75.84
Solyc07g006970.2.1 Tomato plasma membrane 75.73 75.44
PGSC0003DMT400048280 Potato plasma membrane 75.54 75.24
KRH37895 Soybean cytosol, peroxisome, plasma membrane 51.27 73.6
VIT_11s0149g00050.t01 Wine grape plasma membrane 75.73 73.57
CDY26777 Canola plasma membrane 59.69 66.3
CDY47467 Canola plasma membrane 63.01 65.58
Bra037298.1-P Field mustard plasma membrane 62.82 65.38
Os07t0106200-02 Rice plasma membrane 60.27 59.46
Os01t0567500-01 Rice plasma membrane 57.93 57.7
Os08t0178200-02 Rice golgi, plasma membrane, plastid, vacuole 58.51 57.61
Os01t0567600-00 Rice plasma membrane 57.53 57.42
Os03t0218400-01 Rice plasma membrane 57.34 56.89
Os07t0559700-00 Rice plasma membrane 58.71 56.6
Os09t0297300-00 Rice plasma membrane 57.14 55.83
Os03t0594400-01 Rice plasma membrane 55.58 54.41
Os03t0101300-02 Rice plasma membrane 52.25 51.45
Os09t0268300-02 Rice plasma membrane 50.68 50.68
Os10t0561300-01 Rice plasma membrane 51.27 50.58
Os04t0452700-01 Rice plasma membrane 47.95 47.39
Os04t0453200-01 Rice golgi, plasma membrane, vacuole 46.97 47.34
CDX91815 Canola plasma membrane 76.71 46.67
Os11t0594000-01 Rice cytosol, mitochondrion, plasma membrane, vacuole 47.55 46.55
Os02t0160400-01 Rice plasma membrane 46.97 46.15
Os04t0453300-00 Rice extracellular, golgi 15.66 45.98
Os04t0453400-02 Rice plasma membrane 45.99 45.9
Os04t0452600-00 Rice endoplasmic reticulum, plasma membrane, vacuole 42.66 45.61
Os02t0573500-01 Rice plasma membrane 45.99 44.59
Os02t0574100-01 Rice cytosol, peroxisome, plasma membrane 44.23 43.63
Os03t0101500-01 Rice cytosol 0.39 0.77
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6EntrezGene:4347061EMBL:AK065807ProteinID:BAD28916.1ProteinID:BAD29256.1
ProteinID:BAF25090.1ProteinID:BAT08085.1ProteinID:EEE69705.1GO:GO:0003674GO:GO:0005215GO:GO:0005351
GO:GO:0005355GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0008150
GO:GO:0008643GO:GO:0012505GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0042882
GO:GO:0042900GO:GO:0046323GO:GO:0055085GO:GO:0090406GO:GO:1902600InterPro:IPR020846
InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfEnsemblPlantsGene:Os09g0416200EnsemblPlants:Os09t0416200-01PFAM:PF00083
PRINTS:PR00171ScanProsite:PS00217PFscan:PS50850PANTHER:PTHR23500PANTHER:PTHR23500:SF12UniProt:Q6EQ14
SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879TMHMM:TMhelixUniParc:UPI00003CE841
RefSeq:XP_015612499.1SEG:seg::::
Description
Similar to Glucose transporter (Fragment). (Os09t0416200-01)
Coordinates
chr9:+:14887140..14893226
Molecular Weight (calculated)
55287.4 Da
IEP (calculated)
9.314
GRAVY (calculated)
0.522
Length
511 amino acids
Sequence
(BLAST)
001: MAGGGVAALG VKKERAAEYK GRMTLAVGMA CLVAAVGGAI FGYDIGISGG VTSMDPFLKK FFPVVFRKKN DDGQNNYCKY DNQGLSAFTS SLYLAGLVSS
101: LAASPVTRNY GRRASIVCGG LSFLAGATLN AAAVNLVMLI LGRILLGVGI GFGNQAVPLY LSEMAPAHLR GALNMMFQLA TTLGIFTANM INYGTQHIRP
201: WGWRLSLGLA AAPALLMTVG GLLLPETPNS LIERGRVEEG RRVLERIRGT ADVDAEFTDM AEASELANSI EHPFRNILEP RNRPQLVMAV CMPAFQILTG
301: INSILFYAPV LFQSMGFGGS ASLYSSVLTG AVLFSSTIIS ISTVDRLGRR KLLISGGIQM IICQVIVAVI LGVKFGTDKE LTRSYSIAVV VVICLFVLAF
401: GWSWGPLGWT VPSEIFPLET RSAGQSITVA VNLFFTFVIA QAFLSLLCAL KFGIFLFFAG WITVMTVFVH VFLPETKGVP IEEMVLLWRK HWFWKKVMPD
501: LPLEDGDSHH K
Best Arabidopsis Sequence Match ( AT4G02050.2 )
(BLAST)
001: MAGGSFGPTG VAKERAEQYQ GKVTSYVIIA CLVAAIGGSI FGYDIGISGG VTSMDEFLEE FFHTVYEKKK QAHESNYCKY DNQGLAAFTS SLYLAGLVST
101: LVASPITRNY GRRASIVCGG ISFLIGSGLN AGAVNLAMLL AGRIMLGVGI GFGNQAVPLY LSEVAPTHLR GGLNMMFQLA TTIGIFTANM VNYGTQQLKP
201: WGWRLSLGLA AFPALLMTLG GYFLPETPNS LVERGLTERG RRVLVKLRGT ENVNAELQDM VDASELANSI KHPFRNILQK RHRPQLVMAI CMPMFQILTG
301: INSILFYAPV LFQTMGFGGN ASLYSSALTG AVLVLSTFIS IGLVDRLGRR ALLITGGIQM IICQVIVAVI LGVKFGDNQE LSKGYSVIVV IFICLFVVAF
401: GWSWGPLGWT IPSEIFPLET RSAGQSITVA VNLLFTFIIA QAFLGLLCAF KFGIFLFFAG WVTVMTIFVY FLLPETKGVP IEEMTLLWSK HWFWKKVLPD
501: ATNLEDESKN VSV
Arabidopsis Description
STP7Sugar transport protein 7 [Source:UniProtKB/Swiss-Prot;Acc:O04249]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.