Skip to main content
crop-pal logo
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • golgi 2
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G079620.3 Barley golgi, plasma membrane 78.92 80.79
TraesCS2A01G340600.1 Wheat peroxisome, plasma membrane, vacuole 77.95 79.02
TraesCS2B01G338400.1 Wheat peroxisome, plasma membrane, vacuole 77.76 78.82
TraesCS2D01G318200.1 Wheat peroxisome, plasma membrane, vacuole 77.56 78.63
KXG26442 Sorghum peroxisome 79.11 75.46
Zm00001d003471_P001 Maize plasma membrane 79.11 73.43
Os04t0452600-00 Rice endoplasmic reticulum, plasma membrane, vacuole 60.54 65.48
GSMUA_Achr3P06440_001 Banana golgi, plasma membrane, vacuole 64.22 65.23
GSMUA_Achr3P06460_001 Banana peroxisome, plasma membrane, vacuole 60.15 62.2
Os04t0453400-02 Rice plasma membrane 58.61 59.18
Os04t0453200-01 Rice golgi, plasma membrane, vacuole 57.06 58.19
VIT_18s0001g05570.t01 Wine grape plasma membrane 53.19 55.0
Os02t0573500-01 Rice plasma membrane 55.13 54.08
CDY66862 Canola plasma membrane 52.61 53.75
AT1G34580.1 Thale cress cytosol, golgi, plasma membrane 52.42 53.56
KRH62357 Soybean plasma membrane 52.42 53.45
CDX91766 Canola golgi, plasma membrane, vacuole 51.45 52.78
KRH53073 Soybean plasma membrane 51.06 51.87
PGSC0003DMT400016373 Potato plasma membrane 51.45 51.75
KRH62355 Soybean plasma membrane 50.68 51.57
KRH62356 Soybean plasma membrane 50.48 51.28
KRH16713 Soybean plasma membrane 49.71 50.59
Os02t0574100-01 Rice cytosol, peroxisome, plasma membrane 50.68 50.58
Solyc04g074070.1.1 Tomato plasma membrane 49.71 50.49
KRH18902 Soybean plasma membrane 48.94 50.4
Os09t0297300-00 Rice plasma membrane 49.71 49.14
KRH16714 Soybean plasma membrane 48.16 49.11
Os07t0106200-02 Rice plasma membrane 48.74 48.65
Os07t0559700-00 Rice plasma membrane 49.52 48.3
Os04t0453300-00 Rice extracellular, golgi 16.25 48.28
Bra036755.1-P Field mustard plasma membrane 52.42 48.05
Os09t0416200-01 Rice plasma membrane 47.39 47.95
Os08t0178200-02 Rice golgi, plasma membrane, plastid, vacuole 47.78 47.59
Os01t0567600-00 Rice plasma membrane 46.62 47.07
Os01t0567500-01 Rice plasma membrane 46.23 46.59
Os03t0101300-02 Rice plasma membrane 45.84 45.66
Os03t0218400-01 Rice plasma membrane 44.87 45.05
Os11t0594000-01 Rice cytosol, mitochondrion, plasma membrane, vacuole 45.45 45.02
Os03t0594400-01 Rice plasma membrane 45.45 45.02
Os10t0561300-01 Rice plasma membrane 45.07 44.98
Os09t0268300-02 Rice plasma membrane 44.29 44.81
Os02t0160400-01 Rice plasma membrane 41.01 40.77
Os03t0101500-01 Rice cytosol 0.58 1.16
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6EntrezGene:4336012EMBL:AB052883ProteinID:BAF14868.1ProteinID:BAS89476.1
ProteinID:CAE04368.1ProteinID:CAE04369.1ProteinID:EEE56539.1GO:GO:0003674GO:GO:0005215GO:GO:0005351
GO:GO:0005355GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0008643GO:GO:0015293
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0046323GO:GO:0055085GO:GO:1902600
InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfEnsemblPlantsGene:Os04g0452700EnsemblPlants:Os04t0452700-01
PFAM:PF00083PRINTS:PR00171ScanProsite:PS00217PFscan:PS50850PANTHER:PTHR23500PANTHER:PTHR23500:SF73
UniProt:Q0JCR9SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879TMHMM:TMhelix
UniParc:UPI0000DD90E6RefSeq:XP_015636547.1SEG:seg:::
Description
monosaccharide transporter 1Similar to Monosaccharide transporter 1. (Os04t0452700-01)
Coordinates
chr4:+:22598600..22601272
Molecular Weight (calculated)
55244.1 Da
IEP (calculated)
10.194
GRAVY (calculated)
0.623
Length
517 amino acids
Sequence
(BLAST)
001: MAGGVIVAND GDGSAVDHGG RLTFSVVITC LVAASGGLIF GYDVGISGGV STMEPFLRRF FPGVVRRMAE ARPGNEYCVY DSQALTAFTS SLYVAGLVAS
101: LVASRVTRAM GRQAVMVMGG ALFFAGGAVT GFAVNIAMLI VGRMLLGFGV GFTNQAAPLF LAEMAPTRWR GSLTAGFQFF LAVGVVIATV TNYFASRVPW
201: GWRLSLGLAG APAVVIFLGA LFLTDTPSSL VMRGDTARAR AALLRVRGAG ADVEAELKGI VRAVEVARQG EDGAFRRMAA RREYRPYLVF AVAMPMFFQL
301: TGVIVISFFS PLVFRTVGFG SNAALMGNVI LGAVNLVCLM LSTLVIDRYG RKVLFMVGGA IMIIAQVGVA WIMGAQVGKN GSEAMARPYA VAVVAFTCLH
401: TAGFGWSWGP LGWVIPGEIF PVDIRSAGQA MNVSIGLGLT FVQTQSFLAM LCRFRYGTFA YYAAWVAVMT VFIAVFLPET KGVPLESMAT VWARHWYWKR
501: FAREQPKTSA DEPTGTY
Best Arabidopsis Sequence Match ( AT1G34580.1 )
(BLAST)
001: MAGGGLALDV SSAGNIDAKI TAAVVMSCIV AASCGLIFGY DIGISGGVTT MKPFLEKFFP SVLKKASEAK TNVYCVYDSQ LLTAFTSSLY VAGLVASLVA
101: SRLTAAYGRR TTMILGGFTF LFGALINGLA ANIAMLISGR ILLGFGVGFT NQAAPVYLSE VAPPRWRGAF NIGFSCFISM GVVAANLINY GTDSHRNGWR
201: ISLGLAAVPA AIMTVGCLFI SDTPSSLLAR GKHDEAHTSL LKLRGVENIA DVETELAELV RSSQLAIEAR AELFMKTILQ RRYRPHLVVA VVIPCFQQLT
301: GITVNAFYAP VLFRSVGFGS GPALIATFIL GFVNLGSLLL STMVIDRFGR RFLFIAGGIL MLLCQIAVAV LLAVTVGATG DGEMKKGYAV TVVVLLCIYA
401: AGFGWSWGPL SWLVPSEIFP LKIRPAGQSL SVAVNFAATF ALSQTFLATL CDFKYGAFLF YGGWIFTMTI FVIMFLPETK GIPVDSMYQV WEKHWYWQRF
501: TKPTST
Arabidopsis Description
STP5Sugar transport protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q93Y91]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.