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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • mitochondrion 1
  • golgi 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:golgi, mitochondrion, plasma membrane
iPSORT:mitochondrion
MultiLoc:golgi
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G338400.1 Wheat peroxisome, plasma membrane, vacuole 95.25 94.31
TraesCS2A01G340600.1 Wheat peroxisome, plasma membrane, vacuole 95.25 94.31
TraesCS2D01G318200.1 Wheat peroxisome, plasma membrane, vacuole 94.65 93.73
Os04t0452700-01 Rice plasma membrane 80.79 78.92
KXG26442 Sorghum peroxisome 83.76 78.04
Zm00001d003471_P001 Maize plasma membrane 82.77 75.04
HORVU4Hr1G084740.3 Barley golgi, plasma membrane 68.91 67.44
GSMUA_Achr3P06440_001 Banana golgi, plasma membrane, vacuole 65.35 64.83
GSMUA_Achr3P06460_001 Banana peroxisome, plasma membrane, vacuole 62.18 62.8
HORVU2Hr1G079790.7 Barley golgi 57.62 56.5
VIT_18s0001g05570.t01 Wine grape plasma membrane 55.05 55.6
AT1G34580.1 Thale cress cytosol, golgi, plasma membrane 54.65 54.55
CDY66862 Canola plasma membrane 54.65 54.55
CDX91766 Canola golgi, plasma membrane, vacuole 54.06 54.17
KRH62357 Soybean plasma membrane 53.86 53.65
PGSC0003DMT400016373 Potato plasma membrane 54.46 53.5
HORVU2Hr1G079690.3 Barley peroxisome, plasma membrane, vacuole 54.46 53.19
KRH16713 Soybean plasma membrane 52.87 52.56
Solyc04g074070.1.1 Tomato plasma membrane 52.87 52.46
KRH53073 Soybean plasma membrane 52.87 52.46
KRH62355 Soybean plasma membrane 52.08 51.77
KRH62356 Soybean plasma membrane 52.08 51.67
KRH18902 Soybean plasma membrane 51.29 51.59
KRH16714 Soybean plasma membrane 51.29 51.08
HORVU2Hr1G079700.3 Barley cytosol, peroxisome 57.23 50.97
HORVU1Hr1G013480.4 Barley plasma membrane 52.67 50.76
HORVU5Hr1G054140.1 Barley golgi, mitochondrion, plastid 52.67 50.47
Bra036755.1-P Field mustard plasma membrane 54.46 48.76
HORVU2Hr1G041080.6 Barley plasma membrane 50.89 48.4
HORVU5Hr1G000380.1 Barley golgi, plasma membrane 48.91 47.59
HORVU3Hr1G102860.5 Barley plasma membrane 48.32 47.01
HORVU7Hr1G069030.1 Barley plasma membrane 49.31 46.63
HORVU3Hr1G102840.5 Barley plasma membrane 48.71 46.59
HORVU5Hr1G065630.4 Barley cytosol 47.13 45.77
HORVU7Hr1G019280.1 Barley peroxisome, plasma membrane, vacuole 46.14 45.33
HORVU1Hr1G092330.5 Barley golgi, plasma membrane 45.35 44.9
HORVU3Hr1G018700.2 Barley golgi, mitochondrion, plasma membrane, vacuole 44.95 44.34
HORVU3Hr1G018740.2 Barley golgi, mitochondrion, plasma membrane, vacuole 44.95 44.16
HORVU1Hr1G056010.7 Barley peroxisome, plasma membrane, vacuole 45.94 43.94
HORVU5Hr1G055850.2 Barley plasma membrane 45.15 43.02
HORVU5Hr1G065660.1 Barley plasma membrane 44.75 42.09
HORVU1Hr1G075970.1 Barley peroxisome, plasma membrane 44.75 41.02
HORVU7Hr1G019240.1 Barley golgi, mitochondrion, plasma membrane 19.41 40.83
HORVU6Hr1G084290.24 Barley golgi, plasma membrane 44.95 40.54
HORVU6Hr1G025520.1 Barley plasma membrane 40.59 39.2
HORVU2Hr1G064160.1 Barley peroxisome 39.01 36.89
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6UniProt:A0A287IL22GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
EnsemblPlantsGene:HORVU2Hr1G079620EnsemblPlants:HORVU2Hr1G079620.3InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sf
PFAM:PF00083PRINTS:PR00171ScanProsite:PS00217PFscan:PS50850PANTHER:PTHR23500PANTHER:PTHR23500:SF73
SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879TMHMM:TMhelixUniParc:UPI000B467A4A
SEG:seg:::::
Description
No Description!
Coordinates
chrchr2H:+:576131440..576144306
Molecular Weight (calculated)
54182.1 Da
IEP (calculated)
9.776
GRAVY (calculated)
0.618
Length
505 amino acids
Sequence
(BLAST)
001: VVVNDGPAQD YGGRLTLSVL TTCLVAASGG LIFGYDIGIS GGVSQMEPFL RRFFPHVLEK MAVAKQNDYC LYDSQALTAF TSSLYVAGLL ASLVASRVTK
101: AIGRQRVMLM GGALFFAGGA ITGAAMNIAM LIIGRMLLGF GVGFTNQATP LFLSEMAPTQ WRGSLTAGFQ FFLALGVLIA NLTNYATARI SWGWRLSLGL
201: AGAPAVIIFL GALFLTDTPS SLVMRGKADD ARAALLRVRG AGADVDAELK EIVHAVEVAR ESEEGAFHRM ATRREYRPHL VLAVAVPMFF QLTGVIVLSF
301: FAPLVFRTVG FGSNAALMGA VILGGVNLGA LMLSTLVIDR YGRKVMFMVG GIQMIIAQVA MAWIMGAQVG KSGDAPMAKP YGVAILVFTC MHAAGFGWSW
401: GPLGWVVPGE IFPVDIRSAG QAMNVSIGLG LTFVQTQSFL PMLCSFKYAT FAYYAAWVAV MTVFIALFLP ETKGVPLESM GTVWVKHWYW KRFVQPQAQT
501: PHALT
Best Arabidopsis Sequence Match ( AT1G34580.1 )
(BLAST)
001: MAGGGLALDV SSAGNIDAKI TAAVVMSCIV AASCGLIFGY DIGISGGVTT MKPFLEKFFP SVLKKASEAK TNVYCVYDSQ LLTAFTSSLY VAGLVASLVA
101: SRLTAAYGRR TTMILGGFTF LFGALINGLA ANIAMLISGR ILLGFGVGFT NQAAPVYLSE VAPPRWRGAF NIGFSCFISM GVVAANLINY GTDSHRNGWR
201: ISLGLAAVPA AIMTVGCLFI SDTPSSLLAR GKHDEAHTSL LKLRGVENIA DVETELAELV RSSQLAIEAR AELFMKTILQ RRYRPHLVVA VVIPCFQQLT
301: GITVNAFYAP VLFRSVGFGS GPALIATFIL GFVNLGSLLL STMVIDRFGR RFLFIAGGIL MLLCQIAVAV LLAVTVGATG DGEMKKGYAV TVVVLLCIYA
401: AGFGWSWGPL SWLVPSEIFP LKIRPAGQSL SVAVNFAATF ALSQTFLATL CDFKYGAFLF YGGWIFTMTI FVIMFLPETK GIPVDSMYQV WEKHWYWQRF
501: TKPTST
Arabidopsis Description
STP5Sugar transport protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q93Y91]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.