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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, vacuole, plasma membrane

Predictor Summary:
  • peroxisome 1
  • vacuole 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome, plasma membrane, vacuole
Any Predictor:peroxisome, plasma membrane, vacuole
MultiLoc:peroxisome
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G338600.1 Wheat plasma membrane 85.11 96.28
TraesCS2A01G340800.1 Wheat peroxisome, plasma membrane, vacuole 95.55 95.92
TraesCS2D01G318400.1 Wheat plasma membrane 91.68 92.04
Os04t0453300-00 Rice extracellular, golgi 27.08 80.46
EES10919 Sorghum peroxisome, plasma membrane, vacuole 78.72 79.65
GSMUA_Achr3P06440_001 Banana golgi, plasma membrane, vacuole 54.74 55.6
HORVU2Hr1G079620.3 Barley golgi, plasma membrane 53.19 54.46
GSMUA_Achr3P06460_001 Banana peroxisome, plasma membrane, vacuole 52.42 54.2
HORVU1Hr1G013480.4 Barley plasma membrane 52.61 51.91
VIT_18s0001g05570.t01 Wine grape plasma membrane 49.32 51.0
HORVU4Hr1G084740.3 Barley golgi, plasma membrane 49.9 50.0
HORVU2Hr1G079700.3 Barley cytosol, peroxisome 54.74 49.91
KRH16713 Soybean plasma membrane 48.94 49.8
HORVU2Hr1G079790.7 Barley golgi 49.52 49.71
AT1G34580.1 Thale cress cytosol, golgi, plasma membrane 48.55 49.6
CDY66862 Canola plasma membrane 47.78 48.81
KRH62357 Soybean plasma membrane 47.58 48.52
CDX91766 Canola golgi, plasma membrane, vacuole 47.2 48.41
KRH16714 Soybean plasma membrane 47.2 48.13
KRH18902 Soybean plasma membrane 46.62 48.01
Solyc04g074070.1.1 Tomato plasma membrane 46.03 46.76
KRH62356 Soybean plasma membrane 46.03 46.76
KRH53073 Soybean plasma membrane 46.03 46.76
PGSC0003DMT400016373 Potato plasma membrane 46.42 46.69
HORVU3Hr1G102860.5 Barley plasma membrane 46.81 46.63
KRH62355 Soybean plasma membrane 45.07 45.87
HORVU5Hr1G065630.4 Barley cytosol 44.68 44.42
HORVU3Hr1G102840.5 Barley plasma membrane 44.87 43.94
HORVU5Hr1G000380.1 Barley golgi, plasma membrane 44.1 43.93
HORVU5Hr1G054140.1 Barley golgi, mitochondrion, plastid 44.68 43.83
Bra036755.1-P Field mustard plasma membrane 47.58 43.62
HORVU2Hr1G041080.6 Barley plasma membrane 44.49 43.31
HORVU7Hr1G019280.1 Barley peroxisome, plasma membrane, vacuole 42.94 43.19
HORVU1Hr1G056010.7 Barley peroxisome, plasma membrane, vacuole 43.52 42.61
HORVU1Hr1G092330.5 Barley golgi, plasma membrane 41.78 42.35
HORVU7Hr1G069030.1 Barley plasma membrane 43.52 42.13
HORVU3Hr1G018700.2 Barley golgi, mitochondrion, plasma membrane, vacuole 41.59 41.99
HORVU3Hr1G018740.2 Barley golgi, mitochondrion, plasma membrane, vacuole 41.59 41.83
HORVU5Hr1G055850.2 Barley plasma membrane 42.75 41.7
HORVU5Hr1G065660.1 Barley plasma membrane 41.01 39.48
HORVU6Hr1G025520.1 Barley plasma membrane 38.88 38.43
HORVU7Hr1G019240.1 Barley golgi, mitochondrion, plasma membrane 17.8 38.33
HORVU1Hr1G075970.1 Barley peroxisome, plasma membrane 40.62 38.11
HORVU6Hr1G084290.24 Barley golgi, plasma membrane 41.2 38.04
HORVU2Hr1G064160.1 Barley peroxisome 36.56 35.39
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6UniProt:A0A287IKY3GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
EnsemblPlantsGene:HORVU2Hr1G079690EnsemblPlants:HORVU2Hr1G079690.3InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sf
PFAM:PF00083PRINTS:PR00171ScanProsite:PS00217PFscan:PS50850PANTHER:PTHR23500PANTHER:PTHR23500:SF45
SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879TMHMM:TMhelixUniParc:UPI000B45F9F4
SEG:seg:::::
Description
No Description!
Coordinates
chrchr2H:+:576500097..576506348
Molecular Weight (calculated)
56406.3 Da
IEP (calculated)
9.758
GRAVY (calculated)
0.505
Length
517 amino acids
Sequence
(BLAST)
001: MAGGGFVADD GRAQDYGGRM TFSVVVTSLM AASCGLIFGY DSGVTGGVTQ MESFLSKFFP EVQSRMKSPK RDAYCKYDNQ WLTAFTSSLF IAGTLSSLVA
101: SRVTRRVGRQ AIMMIGGVMF LAGSIINAAA VNIAMLIIGR ILLGFGLGFT LQAAPVYLSE TAPARWRGAF TSSYNTFVVI GILSATITNY FTNRIPGWGW
201: RVSLGLAAVP GVIIVVGAFF IPDTPSSLVL RGQPDRARAA LQRIRGEDTN IDAEFKDIVR AVDEARRNDV GSFRRLFSKQ YRHYLAVGLA IPIFFEFTGM
301: IVIAVFSPVL FRTVGFSSQK AILGSVINSM TNLVATVLST FVMDRTGRRF LLIVGGIGMM FCEVAISWVM AGHLGKHQGV TMPHGYATAV LVLICLCTFS
401: FGVSWAPLRW VVPSEIYPVE IRSAGQAMSI SVALCLSFVE LQVFIALLCA MKYGVFLFYA GWLLTMTIFV AAFLPETKGV PLEAMQSVWT GHWYWRKFVK
501: DADRDESQIT SGLSPST
Best Arabidopsis Sequence Match ( AT1G34580.1 )
(BLAST)
001: MAGGGLALDV SSAGNIDAKI TAAVVMSCIV AASCGLIFGY DIGISGGVTT MKPFLEKFFP SVLKKASEAK TNVYCVYDSQ LLTAFTSSLY VAGLVASLVA
101: SRLTAAYGRR TTMILGGFTF LFGALINGLA ANIAMLISGR ILLGFGVGFT NQAAPVYLSE VAPPRWRGAF NIGFSCFISM GVVAANLINY GTDSHRNGWR
201: ISLGLAAVPA AIMTVGCLFI SDTPSSLLAR GKHDEAHTSL LKLRGVENIA DVETELAELV RSSQLAIEAR AELFMKTILQ RRYRPHLVVA VVIPCFQQLT
301: GITVNAFYAP VLFRSVGFGS GPALIATFIL GFVNLGSLLL STMVIDRFGR RFLFIAGGIL MLLCQIAVAV LLAVTVGATG DGEMKKGYAV TVVVLLCIYA
401: AGFGWSWGPL SWLVPSEIFP LKIRPAGQSL SVAVNFAATF ALSQTFLATL CDFKYGAFLF YGGWIFTMTI FVIMFLPETK GIPVDSMYQV WEKHWYWQRF
501: TKPTST
Arabidopsis Description
STP5Sugar transport protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q93Y91]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.