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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • golgi 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, plasma membrane, plastid
iPSORT:plastid
MultiLoc:golgi
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G475200.1 Wheat plasma membrane 93.94 97.64
TraesCS3D01G470300.1 Wheat plasma membrane 93.56 97.24
TraesCS3B01G518800.1 Wheat plasma membrane 92.99 96.65
HORVU3Hr1G102860.5 Barley plasma membrane 85.04 86.51
Os07t0106200-02 Rice plasma membrane 77.27 78.76
EER97830 Sorghum plasma membrane 76.7 77.88
Zm00001d018627_P001 Maize plasma membrane 76.33 77.06
GSMUA_Achr9P24550_001 Banana golgi, plasma membrane, vacuole 71.97 73.08
GSMUA_Achr2P14120_001 Banana plasma membrane 71.78 72.61
GSMUA_Achr9P02830_001 Banana plasma membrane 65.91 72.05
GSMUA_Achr8P03770_001 Banana golgi, plasma membrane, vacuole 64.96 70.58
HORVU2Hr1G041080.6 Barley plasma membrane 69.89 69.49
HORVU5Hr1G054140.1 Barley golgi, mitochondrion, plastid 64.02 64.14
HORVU7Hr1G069030.1 Barley plasma membrane 63.83 63.11
HORVU5Hr1G000380.1 Barley golgi, plasma membrane 60.8 61.85
CDY68476 Canola plasma membrane 12.88 61.82
AT3G19930.1 Thale cress plasma membrane 59.28 60.89
Bra001766.1-P Field mustard plasma membrane 59.09 60.7
KRG90624 Soybean plasma membrane 58.52 60.47
AT1G50310.1 Thale cress plasma membrane 59.09 60.35
CDX82272 Canola plasma membrane 48.86 60.14
CDY25359 Canola plasma membrane 48.86 60.14
CDY36072 Canola plasma membrane 48.86 60.14
Bra039642.1-P Field mustard golgi, plasma membrane, vacuole 58.71 60.08
KRH40901 Soybean plasma membrane 58.14 59.96
CDY33431 Canola plasma membrane 48.67 59.91
CDY53930 Canola golgi, plasma membrane, vacuole 58.52 59.88
CDY29325 Canola golgi, plasma membrane, vacuole 58.52 59.88
Solyc01g008240.2.1 Tomato peroxisome, plasma membrane, vacuole 57.2 59.8
CDY62951 Canola plasma membrane 49.24 59.77
KRH40905 Soybean plasma membrane 57.95 59.77
Bra038242.1-P Field mustard plasma membrane 58.14 59.73
CDY42509 Canola golgi, plasma membrane, vacuole 58.14 59.5
Bra018841.1-P Field mustard golgi, plasma membrane, vacuole 58.14 59.5
CDY22788 Canola golgi, plasma membrane, vacuole 58.14 59.5
CDY38688 Canola plasma membrane 48.48 59.4
KRH36130 Soybean plasma membrane 57.2 59.1
PGSC0003DMT400042165 Potato peroxisome, plasma membrane, vacuole 56.63 59.09
AT3G19940.1 Thale cress plasma membrane 57.2 58.75
CDY62955 Canola extracellular, plasma membrane 23.11 58.65
AT5G23270.1 Thale cress plasma membrane 57.01 58.56
CDY24593 Canola plasma membrane 48.67 58.41
CDY33434 Canola plasma membrane 56.44 58.32
Bra038243.1-P Field mustard plasma membrane 56.44 58.32
CDY33432 Canola plasma membrane 56.44 58.32
Bra038245.1-P Field mustard plasma membrane 56.44 58.32
CDY45759 Canola plasma membrane 57.39 58.05
Bra022468.1-P Field mustard plasma membrane 53.03 57.97
HORVU2Hr1G064160.1 Barley peroxisome 58.52 57.87
CDY66084 Canola golgi, plasma membrane, vacuole 40.34 57.72
CDY02218 Canola plasma membrane 46.97 57.41
CDY33433 Canola cytosol, peroxisome, plasma membrane 31.82 56.76
HORVU5Hr1G065630.4 Barley cytosol 55.68 56.54
CDY62952 Canola golgi, plasma membrane, vacuole 56.06 56.27
Bra013029.1-P Field mustard golgi, plasma membrane, vacuole 39.96 55.97
HORVU7Hr1G019280.1 Barley peroxisome, plasma membrane, vacuole 51.52 52.92
HORVU7Hr1G019240.1 Barley golgi, mitochondrion, plasma membrane 24.05 52.92
HORVU5Hr1G065660.1 Barley plasma membrane 52.84 51.96
HORVU6Hr1G025520.1 Barley plasma membrane 50.95 51.43
HORVU1Hr1G056010.7 Barley peroxisome, plasma membrane, vacuole 50.95 50.95
HORVU5Hr1G055850.2 Barley plasma membrane 50.19 50.0
CDY62956 Canola cytosol 3.79 48.78
HORVU2Hr1G079620.3 Barley golgi, plasma membrane 46.59 48.71
HORVU1Hr1G092330.5 Barley golgi, plasma membrane 46.59 48.24
HORVU3Hr1G018700.2 Barley golgi, mitochondrion, plasma membrane, vacuole 46.59 48.05
HORVU3Hr1G018740.2 Barley golgi, mitochondrion, plasma membrane, vacuole 46.59 47.86
HORVU6Hr1G084290.24 Barley golgi, plasma membrane 50.76 47.86
HORVU1Hr1G075970.1 Barley peroxisome, plasma membrane 48.67 46.64
HORVU1Hr1G013480.4 Barley plasma membrane 45.45 45.8
HORVU2Hr1G079790.7 Barley golgi 44.32 45.44
HORVU4Hr1G084740.3 Barley golgi, plasma membrane 44.32 45.35
HORVU2Hr1G079690.3 Barley peroxisome, plasma membrane, vacuole 43.94 44.87
HORVU2Hr1G079700.3 Barley cytosol, peroxisome 45.08 41.98
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.1.6UniProt:A0A287MI90GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
EnsemblPlantsGene:HORVU3Hr1G102840EnsemblPlants:HORVU3Hr1G102840.5InterPro:IPR020846InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sf
PFAM:PF00083PRINTS:PR00171ScanProsite:PS00216ScanProsite:PS00217PFscan:PS50850PANTHER:PTHR23500
PANTHER:PTHR23500:SF336SUPFAM:SSF103473InterPro:Sugar/inositol_transptInterPro:Sugar_transporter_CSTIGRFAMs:TIGR00879TMHMM:TMhelix
UniParc:UPI000B47646ASEG:seg::::
Description
No Description!
Coordinates
chrchr3H:+:665057417..665062140
Molecular Weight (calculated)
58100.9 Da
IEP (calculated)
9.912
GRAVY (calculated)
0.467
Length
528 amino acids
Sequence
(BLAST)
001: MAGGVMMNTA GGKPYPGKLT LYVVFTCVVA STGGLIFGYD IGISGGVTSM DPFLLKFFPE VYWKKQEAST SNQYCRYDNQ LLQAFTSSLY LAALVASFFA
101: STVTRVLGRR WSMFAGGFAF LVGAALNGAA QNIAMLIVGR TLLGVGIGFA NQSVPLYMSE MAPARLRGML GTGFNLMITT GILTAELINY GTNKIKGGHG
201: WRFSLGLAAV PATVITLGSL FLPDTPNSLM ERGHPEASRR MLRRIRGTDD IGDEYADLVA AREVSKLVQH PWRNIVLRKY RAQLTMAVLI PFFQQLSGIN
301: VINFYAPVLF ETLGFKGDTS LVSSVMTGGV LVLGSLVTML IVDRLGRRKL FLQGGAQMLV SQVVVGTLIA ARFGMSGVGE MPKGYAAAVV LFICLYVAGF
401: VWSWGALGWL VPSEIFPLEI RSAAQSINVS VNMLFTFVIA QAFLTMLCHM KFGLFYFFAG WGVVMTAFVA LFLPETKNVP IEEMVLVWKG HWFWSRFVRD
501: DDIHVQNFPR IKLRPNEFYM VDTPRLME
Best Arabidopsis Sequence Match ( AT1G11260.1 )
(BLAST)
001: MPAGGFVVGD GQKAYPGKLT PFVLFTCVVA AMGGLIFGYD IGISGGVTSM PSFLKRFFPS VYRKQQEDAS TNQYCQYDSP TLTMFTSSLY LAALISSLVA
101: STVTRKFGRR LSMLFGGILF CAGALINGFA KHVWMLIVGR ILLGFGIGFA NQAVPLYLSE MAPYKYRGAL NIGFQLSITI GILVAEVLNY FFAKIKGGWG
201: WRLSLGGAVV PALIITIGSL VLPDTPNSMI ERGQHEEAKT KLRRIRGVDD VSQEFDDLVA ASKESQSIEH PWRNLLRRKY RPHLTMAVMI PFFQQLTGIN
301: VIMFYAPVLF NTIGFTTDAS LMSAVVTGSV NVAATLVSIY GVDRWGRRFL FLEGGTQMLI CQAVVAACIG AKFGVDGTPG ELPKWYAIVV VTFICIYVAG
401: FAWSWGPLGW LVPSEIFPLE IRSAAQSITV SVNMIFTFII AQIFLTMLCH LKFGLFLVFA FFVVVMSIFV YIFLPETKGI PIEEMGQVWR SHWYWSRFVE
501: DGEYGNALEM GKNSNQAGTK HV
Arabidopsis Description
STP1STP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ63]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.