Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- golgi 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G019280.1 | Barley | peroxisome, plasma membrane, vacuole | 99.17 | 46.3 |
| TraesCS7A01G085900.1 | Wheat | plasma membrane | 95.42 | 44.55 |
| TraesCS4A01G384900.1 | Wheat | peroxisome, plasma membrane, vacuole | 94.58 | 44.25 |
| TraesCS7D01G080200.1 | Wheat | peroxisome, plasma membrane, vacuole | 93.33 | 43.75 |
| EER89165 | Sorghum | cytosol, peroxisome, plasma membrane | 82.08 | 37.81 |
| Zm00001d045395_P001 | Maize | plasma membrane | 81.25 | 37.64 |
| CDY23062 | Canola | golgi, plasma membrane, vacuole | 59.17 | 33.26 |
| CDY02138 | Canola | golgi, plasma membrane, vacuole | 58.33 | 32.79 |
| HORVU3Hr1G018700.2 | Barley | golgi, mitochondrion, plasma membrane, vacuole | 65.42 | 30.66 |
| HORVU3Hr1G018740.2 | Barley | golgi, mitochondrion, plasma membrane, vacuole | 65.42 | 30.54 |
| Bra012948.1-P | Field mustard | plasma membrane | 60.42 | 28.54 |
| AT5G61520.1 | Thale cress | plasma membrane | 60.83 | 28.4 |
| HORVU1Hr1G092330.5 | Barley | golgi, plasma membrane | 60.0 | 28.24 |
| GSMUA_Achr6P36920_001 | Banana | plasma membrane | 53.75 | 27.98 |
| HORVU3Hr1G102860.5 | Barley | plasma membrane | 54.58 | 25.24 |
| HORVU5Hr1G054140.1 | Barley | golgi, mitochondrion, plastid | 55.0 | 25.05 |
| HORVU5Hr1G065630.4 | Barley | cytosol | 52.5 | 24.23 |
| HORVU2Hr1G041080.6 | Barley | plasma membrane | 53.33 | 24.11 |
| HORVU3Hr1G102840.5 | Barley | plasma membrane | 52.92 | 24.05 |
| HORVU5Hr1G000380.1 | Barley | golgi, plasma membrane | 51.67 | 23.89 |
| HORVU1Hr1G056010.7 | Barley | peroxisome, plasma membrane, vacuole | 52.5 | 23.86 |
| HORVU5Hr1G065660.1 | Barley | plasma membrane | 52.08 | 23.28 |
| HORVU7Hr1G069030.1 | Barley | plasma membrane | 51.67 | 23.22 |
| HORVU6Hr1G025520.1 | Barley | plasma membrane | 49.58 | 22.75 |
| HORVU1Hr1G075970.1 | Barley | peroxisome, plasma membrane | 50.0 | 21.78 |
| HORVU2Hr1G079790.7 | Barley | golgi | 46.25 | 21.55 |
| HORVU5Hr1G055850.2 | Barley | plasma membrane | 46.67 | 21.13 |
| HORVU1Hr1G013480.4 | Barley | plasma membrane | 45.0 | 20.61 |
| HORVU6Hr1G084290.24 | Barley | golgi, plasma membrane | 46.25 | 19.82 |
| HORVU2Hr1G079620.3 | Barley | golgi, plasma membrane | 40.83 | 19.41 |
| HORVU2Hr1G079690.3 | Barley | peroxisome, plasma membrane, vacuole | 38.33 | 17.8 |
| HORVU4Hr1G084740.3 | Barley | golgi, plasma membrane | 37.92 | 17.64 |
| HORVU2Hr1G064160.1 | Barley | peroxisome | 39.17 | 17.6 |
| HORVU2Hr1G079700.3 | Barley | cytosol, peroxisome | 40.42 | 17.11 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.1.6 | UniProt:A0A287VLD3 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
| EnsemblPlantsGene:HORVU7Hr1G019240 | EnsemblPlants:HORVU7Hr1G019240.1 | InterPro:IPR020846 | InterPro:MFS_dom | InterPro:MFS_sugar_transport-like | InterPro:MFS_trans_sf |
| PFAM:PF00083 | PRINTS:PR00171 | ScanProsite:PS00216 | PFscan:PS50850 | PANTHER:PTHR23500 | PANTHER:PTHR23500:SF30 |
| SUPFAM:SSF103473 | InterPro:Sugar/inositol_transpt | InterPro:Sugar_transporter_CS | TMHMM:TMhelix | UniParc:UPI000B4892D4 | SEG:seg |
Description
No Description!
Coordinates
chrchr7H:-:25672218..25673215
Molecular Weight (calculated)
26174.4 Da
IEP (calculated)
9.604
GRAVY (calculated)
0.692
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: GLRMLLTQQR YRPQLVMAVA IPFFQQVTGI NAIAFYAPVL LRTIGMGESA SLLSSVVTGV VGAASTLLSM FLVDRFGRRT LFLAGGTQML ASQLMIGAIL
101: AAKLGDDGAV SKEWAAALIF LIAVYVAGFG WSWGPLGWLV PSEIFPLEVR SAGQGVTVAT SFVFTVLVAQ TFLSMLCHMR AGIFFFFAAW LAAMTAFVYL
201: LLPETRGVPI EQVDRVWREH WFWRRVLGSD SEEAPASGKL
101: AAKLGDDGAV SKEWAAALIF LIAVYVAGFG WSWGPLGWLV PSEIFPLEVR SAGQGVTVAT SFVFTVLVAQ TFLSMLCHMR AGIFFFFAAW LAAMTAFVYL
201: LLPETRGVPI EQVDRVWREH WFWRRVLGSD SEEAPASGKL
001: MAGGAFVSEG GGGGNSYEGG VTVFVIMTCI VAAMGGLLFG YDLGISGGVT SMEEFLSKFF PEVDKQMHEA RRETAYCKFD NQLLQLFTSS LYLAALASSF
101: VASAVTRKYG RKISMFVGGV AFLIGSLFNA FATNVAMLIV GRLLLGVGVG FANQSTPVYL SEMAPAKIRG ALNIGFQMAI TIGILIANLI NYGTSQMAKN
201: GWRVSLGLAA VPAVIMVIGS FVLPDTPNSM LERGKYEQAR EMLQKIRGAD NVDEEFQDLC DACEAAKKVD NPWKNIFQQA KYRPALVFCS AIPFFQQITG
301: INVIMFYAPV LFKTLGFADD ASLISAVITG AVNVVSTLVS IYAVDRYGRR ILFLEGGIQM IVSQIVVGTL IGMKFGTTGS GTLTPATADW ILAFICLYVA
401: GFAWSWGPLG WLVPSEICPL EIRPAGQAIN VSVNMFFTFL IGQFFLTMLC HMKFGLFYFF GGMVAVMTVF IYFLLPETKG VPIEEMGRVW KQHPFWKRYM
501: PDDAVIGGGE ENYVKEV
101: VASAVTRKYG RKISMFVGGV AFLIGSLFNA FATNVAMLIV GRLLLGVGVG FANQSTPVYL SEMAPAKIRG ALNIGFQMAI TIGILIANLI NYGTSQMAKN
201: GWRVSLGLAA VPAVIMVIGS FVLPDTPNSM LERGKYEQAR EMLQKIRGAD NVDEEFQDLC DACEAAKKVD NPWKNIFQQA KYRPALVFCS AIPFFQQITG
301: INVIMFYAPV LFKTLGFADD ASLISAVITG AVNVVSTLVS IYAVDRYGRR ILFLEGGIQM IVSQIVVGTL IGMKFGTTGS GTLTPATADW ILAFICLYVA
401: GFAWSWGPLG WLVPSEICPL EIRPAGQAIN VSVNMFFTFL IGQFFLTMLC HMKFGLFYFF GGMVAVMTVF IYFLLPETKG VPIEEMGRVW KQHPFWKRYM
501: PDDAVIGGGE ENYVKEV
Arabidopsis Description
STP9STP9 [Source:UniProtKB/TrEMBL;Acc:A0A178WN25]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.