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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX82272 Canola plasma membrane 99.07 99.07
CDY25359 Canola plasma membrane 96.27 96.27
CDY33431 Canola plasma membrane 96.04 96.04
CDY38688 Canola plasma membrane 95.8 95.36
CDY62951 Canola plasma membrane 95.34 94.02
CDY24593 Canola plasma membrane 96.04 93.64
AT3G19930.1 Thale cress plasma membrane 94.64 78.99
CDY68476 Canola plasma membrane 15.15 59.09
CDY62955 Canola extracellular, plasma membrane 26.57 54.81
CDY02218 Canola plasma membrane 55.01 54.63
TraesCS2A01G259500.1 Wheat plasma membrane 64.8 53.77
TraesCS2D01G264200.1 Wheat plasma membrane 64.8 53.77
Os07t0106200-02 Rice plasma membrane 64.8 53.67
TraesCS2B01G282400.1 Wheat plasma membrane 64.57 53.58
Zm00001d018627_P001 Maize plasma membrane 63.64 52.2
TraesCS3B01G518900.1 Wheat plasma membrane 62.47 52.14
CDY53930 Canola golgi, plasma membrane, vacuole 62.7 52.13
TraesCS3D01G470200.1 Wheat plasma membrane 62.24 51.95
EER97830 Sorghum plasma membrane 62.94 51.92
Zm00001d021775_P001 Maize plasma membrane 63.4 51.91
CDY29325 Canola golgi, plasma membrane, vacuole 62.24 51.74
GSMUA_Achr2P10700_001 Banana golgi, plasma membrane, vacuole 57.58 51.57
CDY22788 Canola golgi, plasma membrane, vacuole 62.0 51.55
CDY42509 Canola golgi, plasma membrane, vacuole 62.0 51.55
TraesCS2B01G232900.1 Wheat plasma membrane 63.17 51.52
TraesCS2A01G205500.1 Wheat plasma membrane 62.94 51.33
TraesCS3D01G470300.1 Wheat plasma membrane 60.61 51.18
Os07t0559700-00 Rice plasma membrane 63.17 51.13
CDY33432 Canola plasma membrane 60.84 51.08
CDY33434 Canola plasma membrane 60.84 51.08
HORVU3Hr1G102860.5 Barley plasma membrane 61.77 51.06
EER99540 Sorghum golgi, plasma membrane, vacuole 63.17 51.04
TraesCS3B01G518800.1 Wheat plasma membrane 60.37 50.98
TraesCS3A01G475200.1 Wheat plasma membrane 60.14 50.79
CDY66084 Canola golgi, plasma membrane, vacuole 43.59 50.68
HORVU2Hr1G041080.6 Barley plasma membrane 62.47 50.47
TraesCS7A01G288800.1 Wheat plastid 59.91 50.29
TraesCS7D01G286600.1 Wheat plastid 59.91 50.29
TraesCS7B01G185800.1 Wheat plastid 59.44 49.9
Solyc01g008240.2.1 Tomato peroxisome, plasma membrane, vacuole 58.51 49.7
Zm00001d049467_P001 Maize plasma membrane 59.44 49.61
CDY34842 Canola plasma membrane 60.14 49.52
CDY62952 Canola golgi, plasma membrane, vacuole 60.61 49.43
CDX97945 Canola plasma membrane 60.14 49.43
Os08t0178200-02 Rice golgi, plasma membrane, plastid, vacuole 59.67 49.33
CDY19352 Canola plasma membrane 59.91 49.23
CDX82827 Canola golgi, plasma membrane, vacuole 58.74 49.12
OQU85892 Sorghum plasma membrane 59.67 48.95
GSMUA_Achr4P29880_001 Banana plasma membrane 55.24 48.87
HORVU3Hr1G102840.5 Barley plasma membrane 60.14 48.86
CDY45759 Canola plasma membrane 59.44 48.85
PGSC0003DMT400042165 Potato peroxisome, plasma membrane, vacuole 57.58 48.81
CDX79066 Canola plasma membrane 58.28 48.73
EES13444 Sorghum plasma membrane 58.74 48.37
Os01t0567500-01 Rice plasma membrane 57.81 48.34
Os01t0567600-00 Rice plasma membrane 57.58 48.24
TraesCS3A01G475400.1 Wheat peroxisome 31.24 48.03
HORVU5Hr1G054140.1 Barley golgi, mitochondrion, plastid 58.97 48.01
HORVU7Hr1G069030.1 Barley plasma membrane 59.44 47.75
EES03141 Sorghum golgi, plasma membrane, vacuole 55.94 47.15
Os09t0297300-00 Rice plasma membrane 57.11 46.85
CDY02138 Canola golgi, plasma membrane, vacuole 46.62 46.84
CDY23062 Canola golgi, plasma membrane, vacuole 46.62 46.84
TraesCS5D01G001600.1 Wheat golgi, plasma membrane, vacuole 56.41 46.81
Zm00001d044245_P001 Maize plasma membrane 55.48 46.76
TraesCS5A01G001100.1 Wheat golgi, plasma membrane, vacuole 56.18 46.71
HORVU5Hr1G000380.1 Barley golgi, plasma membrane 56.41 46.63
CDY33433 Canola cytosol, peroxisome, plasma membrane 32.17 46.62
Os03t0594400-01 Rice plasma membrane 56.64 46.55
TraesCS5B01G001000.1 Wheat golgi, plasma membrane, vacuole 55.94 46.42
CDY34655 Canola plasma membrane 59.67 45.96
Zm00001d007078_P001 Maize golgi, plasma membrane, vacuole 52.45 45.92
Zm00001d032409_P001 Maize plasma membrane 57.11 45.71
EER93920 Sorghum golgi, plasma membrane, vacuole 56.64 45.59
CDY07098 Canola plasma membrane 52.45 44.29
CDY22024 Canola plasma membrane 52.45 44.29
CDX90958 Canola plasma membrane 52.21 43.66
CDY18836 Canola plasma membrane 51.05 43.2
CDY27726 Canola golgi, plasma membrane, vacuole 50.58 43.06
CDY66862 Canola plasma membrane 50.58 42.89
CDX87052 Canola peroxisome, plasma membrane, vacuole 52.91 42.67
CDY19773 Canola plasma membrane 52.91 42.67
CDX91766 Canola golgi, plasma membrane, vacuole 50.12 42.66
CDY05216 Canola plasma membrane 50.12 42.66
CDY67102 Canola cytosol, plasma membrane, vacuole 49.88 42.54
CDX74116 Canola plasma membrane 50.35 42.52
CDY49992 Canola golgi, plasma membrane, vacuole 50.35 42.52
CDY52634 Canola plasma membrane 49.65 42.52
CDX88227 Canola plasma membrane 49.42 42.48
CDX80558 Canola plasma membrane 50.12 42.41
EES04558 Sorghum plasma membrane 50.35 41.46
CDY10269 Canola plasma membrane 48.02 41.28
CDY06700 Canola plasma membrane 47.79 41.08
CDX86492 Canola plasma membrane 47.55 40.96
CDY15608 Canola plasma membrane 47.09 40.56
Os02t0160400-01 Rice plasma membrane 48.95 40.38
HORVU6Hr1G025520.1 Barley plasma membrane 49.18 40.34
TraesCS6D01G123300.1 Wheat plasma membrane 49.18 40.34
TraesCS6A01G134000.1 Wheat plasma membrane 48.95 40.15
TraesCS6B01G162200.1 Wheat plasma membrane 48.95 40.15
HORVU2Hr1G064160.1 Barley peroxisome 49.88 40.07
CDY47467 Canola plasma membrane 44.99 39.31
CDY26777 Canola plasma membrane 41.96 39.13
Zm00001d053846_P001 Maize plasma membrane 49.65 38.66
CDX87534 Canola plasma membrane 42.19 37.63
CDX88350 Canola plasma membrane 43.82 36.79
CDX91815 Canola plasma membrane 51.75 26.43
CDY62956 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:1.20.1250.20MapMan:35.1GO:A0A078HE49UniProt:A0A078HE49EnsemblPlants:CDY36072ProteinID:CDY36072
ProteinID:CDY36072.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00059904001InterPro:IPR020846
InterPro:MFS_domInterPro:MFS_sugar_transport-likeInterPro:MFS_trans_sfPFAM:PF00083PRINTS:PR00171ScanProsite:PS00216
ScanProsite:PS00217PFscan:PS50850PANTHER:PTHR23500PANTHER:PTHR23500:SF357SUPFAM:SSF103473InterPro:Sugar/inositol_transpt
InterPro:Sugar_transporter_CSTMHMM:TMhelixUniParc:UPI0004EE312ESEG:seg::
Description
BnaC03g41260DBnaC03g41260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HE49]
Coordinates
chrLK032366:-:355077..357080
Molecular Weight (calculated)
47600.2 Da
IEP (calculated)
9.679
GRAVY (calculated)
0.648
Length
429 amino acids
Sequence
(BLAST)
001: MAGGFVSQTP GVRNYNYKLT PKVFITCFIG AFGGLIFGYD LGISGGVTSM EPFLEEFFPH VYKKMKSAHE NEYCRFDSEL LTLFTSSLYL AALVSSLFAS
101: TITRIFGRKW SMFLGGFTFF VGSAFNGFAQ NIAMLLIGRI LLGFGVGFAN QSVPVYLSEM APPNLRGAFN NGFQVAIIFG IVVATIINYF TAQMKGNIGW
201: RISLGLACES KQVKHPWKNI LLPRYRPQLI MTCSIPFFQQ LTGINVITFY APVLFQTLGF GSKASLLSAM VTGIIELLCT FVAVFTVDRF GRRVLFLQGG
301: IQMLISQIAI GAMIGVKFGT VGTGNIGKTD ANVIVALICI YVAGFAWSWG PLGWLLFLTM LCHMKFGLFF FFAVFVLIMT IFIYLMLPET KNVPIEEMNR
401: VWKAHWFWGR FIPDEAVGVS AAELQQKAV
Best Arabidopsis Sequence Match ( AT3G19930.1 )
(BLAST)
001: MAGGFVSQTP GVRNYNYKLT PKVFVTCFIG AFGGLIFGYD LGISGGVTSM EPFLEEFFPY VYKKMKSAHE NEYCRFDSQL LTLFTSSLYV AALVSSLFAS
101: TITRVFGRKW SMFLGGFTFF IGSAFNGFAQ NIAMLLIGRI LLGFGVGFAN QSVPVYLSEM APPNLRGAFN NGFQVAIIFG IVVATIINYF TAQMKGNIGW
201: RISLGLACVP AVMIMIGALI LPDTPNSLIE RGYTEEAKEM LQSIRGTNEV DEEFQDLIDA SEESKQVKHP WKNIMLPRYR PQLIMTCFIP FFQQLTGINV
301: ITFYAPVLFQ TLGFGSKASL LSAMVTGIIE LLCTFVSVFT VDRFGRRILF LQGGIQMLVS QIAIGAMIGV KFGVAGTGNI GKSDANLIVA LICIYVAGFA
401: WSWGPLGWLV PSEISPLEIR SAAQAINVSV NMFFTFLVAQ LFLTMLCHMK FGLFFFFAFF VVIMTIFIYL MLPETKNVPI EEMNRVWKAH WFWGKFIPDE
501: AVNMGAAEMQ QKSV
Arabidopsis Description
STP4STP4 [Source:UniProtKB/TrEMBL;Acc:A0A178V5Z0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.