CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10269	Canola	plasma membrane	98.6	98.6
CDX86492	Canola	plasma membrane	89.38	89.56
CDY15608	Canola	plasma membrane	89.18	89.36
AT1G07340.1	Thale cress	plasma membrane	82.77	82.93
CDX88227	Canola	plasma membrane	58.52	58.52
CDY52634	Canola	plasma membrane	58.72	58.48
GSMUA_Achr9P11150_001	Banana	plasma membrane	58.32	57.17
CDY18836	Canola	plasma membrane	56.91	56.02
CDY05216	Canola	plasma membrane	56.51	55.95
CDY27726	Canola	golgi, plasma membrane, vacuole	56.31	55.75
GSMUA_Achr11P...	Banana	plasma membrane	56.51	55.51
TraesCS1A01G341100.1	Wheat	plasma membrane	56.31	54.99
CDX74116	Canola	plasma membrane	55.91	54.92
CDY49992	Canola	golgi, plasma membrane, vacuole	55.71	54.72
TraesCS1D01G343200.1	Wheat	plasma membrane	55.71	54.4
TraesCS1B01G353800.1	Wheat	plasma membrane	55.51	54.21
CDY62956	Canola	cytosol	4.41	53.66
EER98187	Sorghum	plasma membrane	54.91	53.52
CDY68476	Canola	plasma membrane	11.42	51.82
Zm00001d019138_P001	Maize	plasma membrane	52.71	51.27
CDY66084	Canola	golgi, plasma membrane, vacuole	37.88	51.22
CDY33434	Canola	plasma membrane	51.7	50.49
CDY33432	Canola	plasma membrane	51.7	50.49
CDY67102	Canola	cytosol, plasma membrane, vacuole	50.5	50.1
HORVU1Hr1G075970.1	Barley	peroxisome, plasma membrane	55.11	49.91
CDX82827	Canola	golgi, plasma membrane, vacuole	51.3	49.9
GSMUA_Achr11P...	Banana	plasma membrane	54.31	49.72
CDX79066	Canola	plasma membrane	51.1	49.71
CDY45759	Canola	plasma membrane	51.7	49.43
CDY42509	Canola	golgi, plasma membrane, vacuole	51.1	49.42
CDY22788	Canola	golgi, plasma membrane, vacuole	51.1	49.42
CDY53930	Canola	golgi, plasma membrane, vacuole	51.1	49.42
CDY02218	Canola	plasma membrane	42.69	49.31
CDX80558	Canola	plasma membrane	49.9	49.11
CDX87052	Canola	peroxisome, plasma membrane, vacuole	52.3	49.06
CDY19773	Canola	plasma membrane	52.3	49.06
CDY62952	Canola	golgi, plasma membrane, vacuole	51.7	49.05
CDY29325	Canola	golgi, plasma membrane, vacuole	50.7	49.03
CDY07098	Canola	plasma membrane	49.5	48.62
CDY22024	Canola	plasma membrane	49.5	48.62
CDY33433	Canola	cytosol, peroxisome, plasma membrane	28.66	48.31
CDY62955	Canola	extracellular, plasma membrane	20.04	48.08
CDX90958	Canola	plasma membrane	49.3	47.95
CDY36072	Canola	plasma membrane	41.08	47.79
CDY34842	Canola	plasma membrane	49.7	47.6
CDX82272	Canola	plasma membrane	40.88	47.55
CDY19352	Canola	plasma membrane	49.5	47.32
CDX97945	Canola	plasma membrane	49.5	47.32
CDY25359	Canola	plasma membrane	40.28	46.85
CDY33431	Canola	plasma membrane	40.08	46.62
CDY62951	Canola	plasma membrane	40.48	46.44
CDY38688	Canola	plasma membrane	39.88	46.17
CDY24593	Canola	plasma membrane	40.28	45.68
CDY26777	Canola	plasma membrane	40.88	44.35
CDY34655	Canola	plasma membrane	49.3	44.17
CDY47467	Canola	plasma membrane	43.29	43.99
CDY23062	Canola	golgi, plasma membrane, vacuole	37.47	43.79
CDX87534	Canola	plasma membrane	41.88	43.45
CDY02138	Canola	golgi, plasma membrane, vacuole	37.07	43.33
CDY66862	Canola	plasma membrane	43.09	42.49
CDX88350	Canola	plasma membrane	43.49	42.47
CDX91766	Canola	golgi, plasma membrane, vacuole	42.69	42.26
CDX91815	Canola	plasma membrane	49.3	29.29

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.1.6	GO:A0A078EXC6	EnsemblPlants:CDY06700	ProteinID:CDY06700	ProteinID:CDY06700.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00122879001	InterPro:IPR020846	InterPro:MFS_dom
InterPro:MFS_sugar_transport-like	InterPro:MFS_trans_sf	PFAM:PF00083	PRINTS:PR00171	ScanProsite:PS00216	ScanProsite:PS00217
PFscan:PS50850	PANTHER:PTHR23500	PANTHER:PTHR23500:SF91	SUPFAM:SSF103473	InterPro:Sugar/inositol_transpt	InterPro:Sugar_transporter_CS
TIGRFAMs:TIGR00879	TMHMM:TMhelix	UniParc:UPI0002544D83	SEG:seg	:	:

Description

BnaA10g04790D

Coordinates

chrLK031972:+:358944..360854

Molecular Weight (calculated)

55565.0 Da

IEP (calculated)

9.518

GRAVY (calculated)

0.502

Length

499 amino acids

Sequence
(BLAST)

001: MAVGVMDIEE GAASLPGKTT FQVVMCSIIA AVGGLMFGYD IGISGGVTSM DTFLLDFFPH VYEKKHRVHE NNYCKFDDQL LQLFTSSLYL AGIFASFAAS
101: FLCRRFGRKP IIMSASIFFL LGAILNYFAR DLGMLIGGRI LLGFGIGFGN QTVPLFISEI APPRIRGGLN IAFQLLITIG ILAASFVNYL TSTMKNGWRY
201: SLGGAAVPAL ILLIGSFFIH ETPASLIERG KDEEGKKVLR KIRGIDNIEL EFNEIKRATE TSNKVKSPFK ELFTKRENRP PLVCGTLLQF FQQFTGINVV
301: MFYAPVLFQT MGSGNNASLV STVVTNGVNA LATVFAVIMV DRLGRKFFLV EGATQMMATQ LTIGALLLKY LHLVGPITSH AVPLIVLILI CIYVSGFAWS
401: WGPLGWLIPS EIYQLEVRTT GYFCAVAMNM VCTFVIGQFF LSALCRFRSG LFFFFAVMNV IMGLFAIFFL PETRGVPIED MAEQRWKKHW HWKKYFKQN

Best Arabidopsis Sequence Match ( AT1G07340.1 )
(BLAST)

001: MAVGSMNVEE GTKAFPAKLT GQVFLCCVIA AVGGLMFGYD IGISGGVTSM DTFLLDFFPH VYEKKHRVHE NNYCKFDDQL LQLFTSSLYL AGIFASFISS
101: YVSRAFGRKP TIMLASIFFL VGAILNLSAQ ELGMLIGGRI LLGFGIGFGN QTVPLFISEI APARYRGGLN VMFQFLITIG ILAASYVNYL TSTLKNGWRY
201: SLGGAAVPAL ILLIGSFFIH ETPASLIERG KDEKGKQVLR KIRGIEDIEL EFNEIKYATE VATKVKSPFK ELFTKSENRP PLVCGTLLQF FQQFTGINVV
301: MFYAPVLFQT MGSGDNASLI STVVTNGVNA IATVISLLVV DFAGRRCLLM EGALQMTATQ MTIGGILLAH LKLVGPITGH AVPLIVLILI CVYVSGFAWS
401: WGPLGWLVPS EIYPLEVRNA GYFCAVAMNM VCTFIIGQFF LSALCRFRSL LFFFFGIMNI IMGLFVVFFL PETKGVPIEE MAEKRWKTHP RWKKYFKD

Arabidopsis Description

STP2STP2 [Source:UniProtKB/TrEMBL;Acc:A0A178W5X1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.